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Report for Sequence Feature Glyma.08g160500

Feature Type:gene_model
Chromosome:Gm08
Start:12503340
stop:12510192
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g160500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G65930.1AT cICDH JGI N/AIEA
1.1.1.42EC isocitrate dehydrogenase (NADP+) JGI N/AIEA
GO:0006102GO-bp isocitrate metabolic process JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0004450GO-mf isocitrate dehydrogenase (NADP+) activity JGI N/AIEA
GO:0016616GO-mf oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor JGI N/AIEA
K00031KEGG Central carbon metabolism in cancer JGI N/AIEA
PTHR11822PantherFam NADP-SPECIFIC ISOCITRATE DEHYDROGENASE JGI N/AIEA
PF00180Pfam Isocitrate/isopropylmalate dehydrogenase JGI N/AIEA

Proteins Associated with Glyma.08g160500
LocusGene SymbolProtein Name
IDH1 NADP-dependent isocitrate dehydrogenase

Gene model name correspondences to Glyma.08g160500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g17080 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g160500
>Glyma.08g160500.1 sequence-type=CDS polypeptide=Glyma.08g160500.1.p locus=Glyma.08g160500 id=Glyma.08g160500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGTTTCAGAAGATAAGGGTGGGCAACCCCATCGTCGAAATGGATGGGGATGAAATGACCCGAGTGATTTGGAAACTGATAAAAGATAAGCTTATTTTCCCTTATTTGGAGCTGGATATTAAGTATTTTGACCTTGGCCTTCCTCATCGCGATGCCACTAATGATAGAGTTACTATTGAAAGCGCTGAAGCTACACTCAAGTATAATGTAGCTATCAAATGTGCTACTATAACTCCAGATGAAGCTCGTGTCAAGGAGTTTAACTTAAAACAAATGTGGAGAAGTCCAAATGGGACGATCCGAAACATTTTAAATGGTACAGTTTTTAGAGAGCCAATTATCTGTAAGAACATTCCTCGTCTTGTTTCAGGATGGACAAAGCCAATATGCATTGGAAGACATGCTTTTGGAGACCAATATCGGGCAACTGATACAGTTATAAAAGGCCCAGGAAAGCTAAAATTGGTTTTTGCACCCAGTGGAAATGAAGGCATTAAAGAGCTAGAGGTCTATAACTTTACTGGTGCTGGAGGCATAGCTTTGTCCATGTATAATACTGATGAGTCCATTCGAGCTTTTGCTGAGGCTTCAATGAACTTTGCTTACCAGAAGAAATGGCCTCTCTATCTTAGCACTAAAAATACCATTTTAAAGAAATATGATGGAAGATTCAAGGACATTTTCCAGGAAGTTTTTGACACCCAATGGAATCACAAGTTCAAAGCTGCAGGGATATGGTATGAACACCGTCTTATAGATGATATGGTTGCTTATGCTCTCAAAAGTGATGGAGGTTATGTATGGGCCTGCAAGAATTATGATGGTGATGTGCAGAGTGATTTCTTAGCTCAAGGATTTGGTTCACTTGGCTTGATGACGTCAGTACTGGTTTGCCCAGATGGGAAAACCATTGAAGCAGAGGCAGCCCATGGCACTGTTACCCGTCATTATCGGGTTCATCAGAAGGGAGGTGAAACCAGCACAAACAGTATTGCTTCAATTTTTGCCTGGTCGCGAGGTCTTGCACATAGGGCAAAATTGGATGGAAATGCTAGATTGTTGGACTTCACAGAGAAACTGGAAGCAGCTTGCATTGGAACAGTTGAATTGGGAAAGATGACAAAGGATCTTGCACTTCTTGTTCATGGACCTAAGGTTTCTAGATCCCAGTATTTGAATACTGAAGAGTTCATTGATGCCGTAGCCGAGGAGCTGCGAACAAGATTATCTTCACAATCGAAGCTGTAA
Predicted protein sequences of Glyma.08g160500
>Glyma.08g160500.1.p sequence-type=predicted peptide transcript=Glyma.08g160500.1 locus=Glyma.08g160500 id=Glyma.08g160500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGFQKIRVGNPIVEMDGDEMTRVIWKLIKDKLIFPYLELDIKYFDLGLPHRDATNDRVTIESAEATLKYNVAIKCATITPDEARVKEFNLKQMWRSPNGTIRNILNGTVFREPIICKNIPRLVSGWTKPICIGRHAFGDQYRATDTVIKGPGKLKLVFAPSGNEGIKELEVYNFTGAGGIALSMYNTDESIRAFAEASMNFAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVFDTQWNHKFKAAGIWYEHRLIDDMVAYALKSDGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDGNARLLDFTEKLEAACIGTVELGKMTKDLALLVHGPKVSRSQYLNTEEFIDAVAEELRTRLSSQSKL*






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