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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT2G13680.1 | AT | callose synthase 5 | JGI | N/A | IEA |
| GO:0006075 | GO-bp | (1->3)-beta-D-glucan biosynthetic process | EnsemblGenomes | N/A | IEA |
| GO:0006075 | GO-bp | (1->3)-beta-D-glucan biosynthetic process | JGI | N/A | IEA |
| GO:0000148 | GO-cc | 1,3-beta-D-glucan synthase complex | EnsemblGenomes | N/A | IEA |
| GO:0000148 | GO-cc | 1,3-beta-D-glucan synthase complex | JGI | N/A | IEA |
| GO:0016020 | GO-cc | membrane | EnsemblGenomes | N/A | IEA |
| GO:0016020 | GO-cc | membrane | JGI | N/A | IEA |
| GO:0016021 | GO-cc | integral component of membrane | EnsemblGenomes | N/A | IEA |
| GO:0003843 | GO-mf | 1,3-beta-D-glucan synthase activity | EnsemblGenomes | N/A | IEA |
| GO:0003843 | GO-mf | 1,3-beta-D-glucan synthase activity | JGI | N/A | IEA |
| KOG0916 | KOG | 1,3-beta-glucan synthase/callose synthase catalytic subunit | JGI | N/A | IEA |
| PTHR12741 | Panther | LYST-INTERACTING PROTEIN LIP5 (DOPAMINE RESPONSIVE PROTEIN DRG-1) | JGI | N/A | IEA |
| PTHR12741:SF4 | Panther | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG | JGI | N/A | IEA |
| PF02364 | PFAM | 1,3-beta-glucan synthase component | JGI | N/A | IEA |
| PF04652 | PFAM | Vta1 like | JGI | N/A | IEA |
| PWY-6773 | SoyCyc9 | 1,3-β-D-glucan biosynthesis | Plant Metabolic Network | ISS | |
| GN7V-54487 | SoyCyc9-rxn | 1,3-β-glucan synthase | Plant Metabolic Network | ISS |
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Glyma.08g156800 not represented in the dataset |
Glyma.08g156800 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma08g16660 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.08g156800.1 sequence-type=CDS polypeptide=Glyma.08g156800.1.p locus=Glyma.08g156800 ID=Glyma.08g156800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGGCGCGGGACGAAGTTGGTTCCAAAATCCAAATATTGGGTTGACGAAATGGCGGTGGAGAGGAAGAAGAATGTCGAATCCGGATCAGACAGTATTGAATCGGCGGCCATCAAGAAGTGCCGCGACGACGACGTTTTCGCTGGAGGTGTTCGACAACGACGTCGTGCCCTCCTCACTCGCCTCCATTTCTCCCATTCTCAGAGTCGCCAACGAAATTGAAACCGAGCGCCCCAGGGTTGCTTATCTCTGTAGGTTCTATGCCTTCGAAAAAGCGCACAGGCTAGATCAGAGTTCTAGCGGGCGTGGCGTCAGGCAGTTTAAGACGTTGTTACTACAGCGATTGGAGAGGGACAATCCAACTAGTCTTGCCTCTCGGGCTAAGAAAACAGATGCGAGAGAAATTCAATCTTACTATCAGCAATATTATGAACATTATGTCAGAACTCTCGACCAAGTGAATCAGGCAGACAGAGCCCAGCTTAGCAAAGCTTACCAGACTGCTGGGGTTCTATTCGAAGTGCTTTGTGCCGTCAACAAGACTGAGAAGGTCGAAGAAGTTGCTCCTGAGATTATCGCGGCTGCTAGAGATGTCCAGGAGAAGACGGAGATTTATACGCCTTACAATATTCTTCCTCTGGATGCTGCTGGTGCTTCTGTGCCCATTATGCAATTTGAAGAGATTAAGGCTGCTGTTTCTGCGCTTTGGAATACTCGTGGCTTGAACTGGCCTAATTCATTTGAGCAACAGAGGCAGAAAACTGGAGATTTAGACATGCTTGATTGGCTTAGAGCCATGTTTGGCTTTCAGAGGGACAACGTCAGGAATCAGAGAGAGCATCTGATTTTGCTTCTTGCTAATTCTCATATAAGGCTACACCCTAGACCCGAGCCTTTCAACCTGCTCGATGATCGGGCTGTTGATTCAGTGATGAAAAATCTCTTCAAGAATTACAAATCATGGTGCAAATTCTTGGGACGAAAACATAGTTTACGACTTCCTCAAGGTCAGCAAGAGATACAGCAGAGGAAGTTGCTTTATATGGGCTTGTATCTTCTTATCTGGGGCGAAGCATCCAATGTTCGTTTCATGCCAGAGTGTCTATGCTACATATTTCACAATATGGCATATGAACTCCATGGTTTATTGGCTGGAAATGTCAGCATTGTTACTGGTGAAAATATCAAGCCTTCTTATGGTGGTGATGATGAGGCATTCCTGCGCAAGGTTATAACTCCCCTGTATCAAGTAATACAAAAGGAAGCAAAGAAGAGTGGACATGGAAAGGCTCCGCACTCAGCATGGTGCAACTATGATGATCTAAATGAGTATTTCTGGTCATCTGATTGCTTTTCTCTAGGATGGCCCATGCGTAATGATGGTGAATACTTTAAATCAACAAGTGATTTGGCACAGGGAAGAAATGGTGCTGCTGCAAGAAAATCTGGAAAAACTGGCAAATCAAATTTTGTTGAGACACGAACATTCTGGCACATCTTCCGCAGCTTTGACCGTCTGTGGACATTTTTTATACTGGGTTTGCAGGTGATGTTCATTATTGCTTGGGAAGGGATTTCACTGACGGATATATTTCAGAAGGATGTCTTATATAATCTATCTAGTATATTCATCACAGCATCCATTCTGCGCTTGCTTCAAAGTATCTTGGACCTGATCCTGAACTTTCCAGGCTATCATCGATGGAAATTCACTGATGTGCTAAGAAATATTCTTAAAGTCTTTGTCAGTCTTTTTTGGGTTATCATTCTTCCACTCTTCTATGTTCATTCCTTCAAGGGTGCACCTCAGGGTCTGAAGCAGTTGCTTTCCTTTTTCAAACAAATAAGAGGCATTCCAGCATTTTACATGCTGGCAGTTGCATTATATTTGCTTCCAAATTTACTAGCAGCTGTTCTGTTTCTTTTCCCAATGTTAAGGCGTTGGATTGAAAACTCAGACTGGCACATAGTCAGACTCTTCTTATGGTGGTCTCAGCCAAGCATCTATGTTGGAAGAGGAATGCATGATAGTCAATTTGCTCTCATGAAGTACACTATATTCTGGTTGTTGCTTTTGACATGTAAATTTTTATTCAGCTTTTTTGTCCAGATAAAACCTCTAGTTAGGCCAACAAAGGACATAATGAGCATTCGACGTGTTAATTATGGCTGGCATGCATTTTTTCCCAATGCTCGAAATAACTATAGTGCAGTAGTTGCACTCTGGGCTCCTGTACTTTTGGTTTATTTCATGGACACTCAAATTTGGTATGCAATCTTCTCAACTTTGTACGGTGGTCTTGTTGGAGCCTTTGATCGTCTAGGAGAGATACGCACTCTGAGCATGCTAAGATCACGGTTTCAGTCATTGCCTGGTGCATTCAACACATGCTTGGTTCCTTCTGATAAGAAGACTAAACTATGTTTGCATGACTCCAGGGAGATGGATCTTTTGCTAGTTCCTTACTCATTGGGTCATAATCTGAAAATAATTCAGTGGCCACCATTTTTGCTTGCAAGCAAGATTACTGTAGCACTAGATATGGCAACTCAGTTTCGAGGGAGGGACTCTGATCTTTGGAAGCGCATATGTGCTGATGAATATATGAAATGTGCTGTGATTGAATGCTATGAATCCTTTAAACATGTTCTACATGATTTAGTGATAGGAGAAACTGAAAAAAGTATAATTTCCTCCATCATCAAAGAAGTCGAGAGCAACATCTCAAAGAATACACTTCTTACAAATTTCCGTATGGGCTTTCTACCCTCCCTTTGTAAGAAGTTCGTGGAGCTTGTGGAAATCATGAAAAATGGAGATCCATCCAAGCGGGGTACAGTGGTGGTCTTGCTGCAAGACATGTTAGAAGTGGTCACTGATATGATGGTGAATGAAATCAGCGAATTGGCAGAACTTCATCAAAGTAGTAAGGATACCGGACAACAAGTTTTTGCTGGTACAGAGGCAAAACCTGCTATACTATTCCCTCCTGTGGTTACAGCACAATGGGAGGAACAGATTAGACGTCTTTATCTACTCTTGACTGTCAAGGAAACTGCCGTTGAAGTTCCAACAAACAGTGAAGTACGTAGAAGGGTTTCATTCTTTACCAATTCATTGTTCATGGATATGCCACGTGCTCCTCGAGTACGTAAAATGCTCTCATTCAGTGTCCTAACTCCATACTACAGTGAAGAGACAGTATATTCTAAGAATGACATTGAGGTTGAGAATGAAGATGAGGAATGGAATAACTTCTTGGAGCGACTTGATTGTAAGAAAGATAGTGATATATGGGAGAAAGAGGAGAATATATTACAGCTACGTCACTGGGCCTCATTAAGGGGACAAACACTTTGTAGGACAGTTAGGGGAATGATGTACTACCGACGAGCAATAAAGCTCCAGGCATTTCTTGATATGGCTTCTGAAAAAGAGATATTCGATGGTTATAAAGCTATTGCTGTTCCATCTGAGGAAGAAAAAAAGAGTCATAGATCCTTATATGCCCGTTTAGAGGCTATGGCTGACTTGAAATTCACATACGTTGCGACCTGTCAGCAATATGGGAATCAGAAGCGCTCTGGGGACCGTCGTGCAACAGATATCCTGAATTTGATGGTTAACAATCCCTCACTTCGTGTTGCATATATTGATGAAGTTGAAGAAAGAGAAGGTGGAAAAGTACAGAAAGTTTATTATTCTGTATTGGTCAAAGCTGTGGACAATCTTGACCAAGAAATATATCGAATAAAGCTTCCGGGCCCAGCAAAGTTAGGAGAAGGAAAGCCAGAAAACCAAAATCATGCCATCATTTTTACTAGAGGGGAAGCTCTTCAGGCTATCGACATGAACCAGGATAATTATTTGGAAGAAGCTTTGAAAATGCGTAACCTTCTGGAAGAATTTAATGAGGATCATGGAGTGCGCCCCCCCACCATATTAGGTGTTCGTGAGCATATTTTCACTGGAAGTGTCTCTTCCTTGGCCTGGTTTATGTCAAACCAAGAAACTAGCTTTGTCACTATTGGTCAAAGAGTTCTTGCTAGACCACTAAAGGTTCGATTCCACTATGGTCATCCGGATGTTTTTGATAGAATTTTCCATTTTACCCGTGGAGGAATCAGCAAGGCTTCTTGTGGCATCAATCTGAGCGAGGATATATTTGCTGCAATATTTGATATTTCTACCTTTGCATCATATGCCTTTGCCTATACAGGATTCAACTCAACACTAAGACGTGGGAATGTTACTCATCATGAATATATCCAAGTTGGAAAGGGTAGAGATGTAGGGCTCAATCAAATCTCTCTTTTTGAAGCAAAAGTGGCCTGTGGTAATGGAGAGCAGATACTAAGCAGGGACATCTACAGACTGGGGCATCGATTTGACTTTTTCCGCATGCTATCATTTTACTTTACAACCGTTGGATTTTATATCAGCTCAATGTTAGTGGCCATCACGGTATATGCTTTCCTCTATGGCAGATTTTACCTGTCATTGAGTGGATTGGAGGAGGCTATAATTAAGATAGCCAGGAAAAAGGGAGATGATCCATTAAAGGCAGCAATGGCTTCCCAATCCCTTGTTCAAATAGGTCTTCTGATGACTCTTCCCATGGTTATGGAAATTGGACTAGAGAGAGGATTCAGAACTGCACTAAGTGACATCATAATAATGCAGCTGCAGCTAGCACCCGTTTTCTTCACTTTCTCACTAGGGACTAAGATGCACTATTTTGGGCGCACTCTCCTGCATGGAGGGGCAAAGTACAGAGCAACTGGGCGTGGTTTTGTAGTTCGTCACGAGAGGTTTGCAGATAACTACAGGATGTATTCTAGGAGTCACTTTGTAAAAGGGATAGAGATTTCTATACTGCTTATATGTTATGGGCTTTATGGATCAGCAGCTCCTGATTCAACAGCATATGCCCTTCTCTCAGTATCAATGTGGTTTTTGGCATGTTCTTGGTTGTTCAGTCCTTTCCTTTTTAACCCATCGGGATTCGAGTGGCAGAAGATTGTTGAGGATTGGGATGATTGGGCAAAATGGATAAGTAGTCGAGGTGGTATTGGTGTTCCTTCAATTAAGAGCTGGGAATCATGGTGGGATGAGGAGCAGGAACATCTGCAGTACACTGGGATTTGGGGGAGGATTTGGGAGGTCATTCTTGCCCTGCGTTTCTTTGTCTATCAGTATGGGATTGTGTATCATCTACATGTTGCTAGAGGTGACAAGAGTATCGGGGTTTATGGTCTGTCCTGGTTAGTTGTAGTGGCTGTCATAGTCATCTTGAAGATAGTGTCCATGGGGAGCAAGACATTCAGTGCAGATTTCCAGCTGATGTTTCGTCTCCTCAAAATGTTTCTGTTTATTGGAACCATTGTCATTCTAATTTTGATGTTTGTCCTACTTAGTTTCACAGTTGGTGACATCTTTGCGAGCCTCCTAGCCTTTATGCCCACAGGTTGGGCATTTATACAGATAGCTCAAGCATGTAAGCCATTGGTGAAGGGAATTGGAATGTGGGGGTCTATCAAAGCGTTATCAAGAGGGTATGAATACGTGATGGGAGTGATTATCTTTGCACCAGTGGCCATAATGGCTTGGTTCCCTTTTGTTTCCGAATTCCAAACTAGACTGCTATACAACCAAGCTTTCAGCCGAGGGCTTCAAATCCAGCGCATTCTGGCTGGTGGCAAGAAGAATAAATAA
>Glyma.08g156800.1.p sequence-type=predicted peptide transcript=Glyma.08g156800.1 locus=Glyma.08g156800 ID=Glyma.08g156800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MGAGRSWFQNPNIGLTKWRWRGRRMSNPDQTVLNRRPSRSAATTTFSLEVFDNDVVPSSLASISPILRVANEIETERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNPTSLASRAKKTDAREIQSYYQQYYEHYVRTLDQVNQADRAQLSKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYTPYNILPLDAAGASVPIMQFEEIKAAVSALWNTRGLNWPNSFEQQRQKTGDLDMLDWLRAMFGFQRDNVRNQREHLILLLANSHIRLHPRPEPFNLLDDRAVDSVMKNLFKNYKSWCKFLGRKHSLRLPQGQQEIQQRKLLYMGLYLLIWGEASNVRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGDDEAFLRKVITPLYQVIQKEAKKSGHGKAPHSAWCNYDDLNEYFWSSDCFSLGWPMRNDGEYFKSTSDLAQGRNGAAARKSGKTGKSNFVETRTFWHIFRSFDRLWTFFILGLQVMFIIAWEGISLTDIFQKDVLYNLSSIFITASILRLLQSILDLILNFPGYHRWKFTDVLRNILKVFVSLFWVIILPLFYVHSFKGAPQGLKQLLSFFKQIRGIPAFYMLAVALYLLPNLLAAVLFLFPMLRRWIENSDWHIVRLFLWWSQPSIYVGRGMHDSQFALMKYTIFWLLLLTCKFLFSFFVQIKPLVRPTKDIMSIRRVNYGWHAFFPNARNNYSAVVALWAPVLLVYFMDTQIWYAIFSTLYGGLVGAFDRLGEIRTLSMLRSRFQSLPGAFNTCLVPSDKKTKLCLHDSREMDLLLVPYSLGHNLKIIQWPPFLLASKITVALDMATQFRGRDSDLWKRICADEYMKCAVIECYESFKHVLHDLVIGETEKSIISSIIKEVESNISKNTLLTNFRMGFLPSLCKKFVELVEIMKNGDPSKRGTVVVLLQDMLEVVTDMMVNEISELAELHQSSKDTGQQVFAGTEAKPAILFPPVVTAQWEEQIRRLYLLLTVKETAVEVPTNSEVRRRVSFFTNSLFMDMPRAPRVRKMLSFSVLTPYYSEETVYSKNDIEVENEDEEWNNFLERLDCKKDSDIWEKEENILQLRHWASLRGQTLCRTVRGMMYYRRAIKLQAFLDMASEKEIFDGYKAIAVPSEEEKKSHRSLYARLEAMADLKFTYVATCQQYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGGKVQKVYYSVLVKAVDNLDQEIYRIKLPGPAKLGEGKPENQNHAIIFTRGEALQAIDMNQDNYLEEALKMRNLLEEFNEDHGVRPPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHFTRGGISKASCGINLSEDIFAAIFDISTFASYAFAYTGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQILSRDIYRLGHRFDFFRMLSFYFTTVGFYISSMLVAITVYAFLYGRFYLSLSGLEEAIIKIARKKGDDPLKAAMASQSLVQIGLLMTLPMVMEIGLERGFRTALSDIIIMQLQLAPVFFTFSLGTKMHYFGRTLLHGGAKYRATGRGFVVRHERFADNYRMYSRSHFVKGIEISILLICYGLYGSAAPDSTAYALLSVSMWFLACSWLFSPFLFNPSGFEWQKIVEDWDDWAKWISSRGGIGVPSIKSWESWWDEEQEHLQYTGIWGRIWEVILALRFFVYQYGIVYHLHVARGDKSIGVYGLSWLVVVAVIVILKIVSMGSKTFSADFQLMFRLLKMFLFIGTIVILILMFVLLSFTVGDIFASLLAFMPTGWAFIQIAQACKPLVKGIGMWGSIKALSRGYEYVMGVIIFAPVAIMAWFPFVSEFQTRLLYNQAFSRGLQIQRILAGGKKNK*
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