Glyma.08g151600

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Report for Sequence Feature Glyma.08g151600

Feature Type:	gene_model
Chromosome:	Gm08
Start:	11643276
stop:	11650389
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.08g151600

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G59550.1	AT	Rad21/Rec8-like family protein	JGI	N/A	IEA
AT5G16270.1	AT	sister chromatid cohesion 1 protein 4	JGI	N/A	IEA
GO:0006302	GO-bp	double-strand break repair	EnsemblGenomes	N/A	IEA
GO:0007062	GO-bp	sister chromatid cohesion	EnsemblGenomes	N/A	IEA
GO:0000228	GO-cc	nuclear chromosome	EnsemblGenomes	N/A	IEA
GO:0000228	GO-cc	nuclear chromosome	JGI	N/A	IEA
GO:0000798	GO-cc	nuclear cohesin complex	EnsemblGenomes	N/A	IEA
GO:0003682	GO-mf	chromatin binding	EnsemblGenomes	N/A	IEA
GO:0005515	GO-mf	protein binding	EnsemblGenomes	N/A	IEA
GO:0005515	GO-mf	protein binding	JGI	N/A	IEA
KOG1213	KOG	Sister chromatid cohesion complex Cohesin, subunit RAD21/SCC1	JGI	N/A	IEA
PTHR12585	Panther	SCC1 / RAD21 FAMILY MEMBER	JGI	N/A	IEA
PTHR12585:SF5	Panther		JGI	N/A	IEA
PF04824	PFAM	Conserved region of Rad21 / Rec8 like protein	JGI	N/A	IEA
PF04825	PFAM	N terminus of Rad21 / Rec8 like protein	JGI	N/A	IEA

Expression Patterns of Glyma.08g151600

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.08g151600 not represented in the dataset	Glyma.08g151600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.08g151600 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma08g16091	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.08g151600

Limit To All Plant Sequences

>Glyma.08g151600.2 sequence-type=transcript locus=Glyma.08g151600 ID=Glyma.08g151600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATCTGAAAATCCAACACAAAGCTTTCCGACATCGCGCCTCTTCACTCTCGCAATTCATAGTTTCCCGCGCCAAATGTTTTTTAACACACCCAAACCCAATGTATCCCTCCAATCTCATTAACCCTAACCAAACAAAcctcgtcccctccgaaatcctaattctcatcctcgtcctcgtccCATAAAAAAACCTCAGCGAACTCGAAGAAGAAGAAGAACATGTTTTATTCTCAAACCTTTTTGGCGCGAAAGGGCCCACTCTCCACCGTGTGGATCGCCGCTCACCTCCAACACCGCCTCAAGAAATCGCACTACACCGCCACCGACATCCCCTCCACCGTCCTGCGAATCATGGACCCCGGTGTCCCCATAGCGCTGCGAATGTCGGGACACCTTCTCCTCGGCGTCGTGAGGATATACTCCAAGAAAGTGGAATACCTTCACCAGGACTGCAAGGATGCACTCACCGGTCTCCACAAGGCGTTCGCCACGCTTCAGTTCGCCCAGCCGGAGGAGGCCAGGCCGGCACCGTTTCAATCGGTGACTCTCCCCGGAACGTTCGACCTCGATGCGCAAAACATAGACGACCAAATAGAGTACATCAGGGCTGAGGATCTTCACATGAGGAATCCAGAAGACATCACGCTGACAGATCTAATTCCTGTCACAATGGATGAGTATGTAGCTGTATCTTTTGATGAGGATATAATAATGGATTCTTCGCGTACAGAAGTGCTGCCTGATTCTGGGGGGACTGTACCAATGGAGGACATTATTCCCCAATCTCCATTGAGCAATGCGGTGGGTGCTGAAGATCATGGTCCAAGTGTTCACAGTCCTTCACAGGCAATCCAACCCGAGCCATTTGAGCTTCTTCGTCGCACTGCCAACAATGACAATATTCAAGTATTTCAGCATTCTGGTGGATTGTGTCCCAGTGTTCACAGTCCTTCACAGGGAACCCAAGTTGAGGTTGGTCGGGATGCCAACAATGATGATAATGTAGAAAACCCTCAGGTATTTACAAATCGTGAGGATAATGATGTTGCTGAACCAAACGGAGGTCTTGACCAAACTACGAATGAAAAGGATCATGTTCCTGGAATGATGCGTGATTTGAATTTTAGGATGTCTGTGCCATCTCCTATGAATCCACTAACTCCACCTACCTCTCAAGGAGGTGCCTCAGATGCACAAGCTCATGATGAGATTAATGTTCCCGATTTTGTGGTCCGTGAAAGTCCACCCATACAGCAGCCACAACGGAGAGGAAGAAAAAGAAAACAATTCTTTGATGAACCCATAGTGTTAACAAATGGATTCATGAGGAGTGCACTTAATAACACTCGTGATATACTGCGGAAAAGAAGGGATGTTCCTTCATCTAGTTTGGGTACCTGGAAATTGAACAATATTCGAAGAAAAGAACACATTTTTGACCAGCCCTTGTTAACTGGGATTGGCAAGGATCTTTTGGACATATCCAAAAGTGAATATGTACGTTCAAGATCTCATTTGGTCATCTTTGAGGAAGATCATGCAGATGTTAGGATGGGTGAAGAAACTCTTTCTCCAACTAACGAACCCCCTGAAGAATCATTAGCTGCTACTAATGAACCCCCTGAAGAGCCAATAGCTGCTACTAACCAACCCCCTGAAGAGCCAATAGCTGCTACTGACCATCCCCATGAAGAGCCAATAGCTACTACTGACCAAACCTCTGAAGAGGCAATAACTGCTACTTCTCCTGTTACTGATATGCAAGTTGAACACAATCGAAATGTTGCTGTCACCCCCCCTGCCACCGCCCAAGCACCACATGAAGATGATTATACGAGCCCTAATAGAAGAGATTGCTTCAATATGCCTTCATCTCATAACATATCCATTGCTTCTTTGAATACAAATATTGCATCTGAGAGAATGCATACATTAGATTATGCAGTGTCACCTGGAGTTCATGGATTGGAGGCAATGCAAACACCAGATTCAGATACTCATGACTTGATGAGTTCTGATAAAACAGATGAGTTTTGGTTTCTGAAATTGGACAGCACCACACCAGCCAGTAGGTTCTCTCTCAATGCCATCTTCAGTTTGATTTTCCTGTGAAATGTTTTACTTATTTATTGTGGCATTGCTTGTATTATATGATACTAG

Coding sequences of Glyma.08g151600

Limit To All Plant Sequences

>Glyma.08g151600.1 sequence-type=CDS polypeptide=Glyma.08g151600.1.p locus=Glyma.08g151600 ID=Glyma.08g151600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTTTATTCTCAAACCTTTTTGGCGCGAAAGGGCCCACTCTCCACCGTGTGGATCGCCGCTCACCTCCAACACCGCCTCAAGAAATCGCACTACACCGCCACCGACATCCCCTCCACCGTCCTGCGAATCATGGACCCCGGTGTCCCCATAGCGCTGCGAATGTCGGGACACCTTCTCCTCGGCGTCGTGAGGATATACTCCAAGAAAGTGGAATACCTTCACCAGGACTGCAAGGATGCACTCACCGGTCTCCACAAGGCGTTCGCCACGCTTCAGTTCGCCCAGCCGGAGGAGGCCAGGCCGGCACCGTTTCAATCGGTGACTCTCCCCGGAACGTTCGACCTCGATGCGCAAAACATAGACGACCAAATAGAGTACATCAGGGCTGAGGATCTTCACATGAGGAATCCAGAAGACATCACGCTGACAGATCTAATTCCTGTCACAATGGATGAGTATGTAGCTGTATCTTTTGATGAGGATATAATAATGGATTCTTCGCGTACAGAAGTGCTGCCTGATTCTGGGGGGACTGTACCAATGGAGGACATTATTCCCCAATCTCCATTGAGCAATGCGGTGGGTGCTGAAGATCATGGTCCAAGTGTTCACAGTCCTTCACAGGCAATCCAACCCGAGCCATTTGAGCTTCTTCGTCGCACTGCCAACAATGACAATATTCAAGTATTTCAGCATTCTGGTGGATTGTGTCCCAGTGTTCACAGTCCTTCACAGGGAACCCAAGTTGAGGTTGGTCGGGATGCCAACAATGATGATAATGTAGAAAACCCTCAGGTATTTACAAATCGTGAGGATAATGATGTTGCTGAACCAAACGGAGGTCTTGACCAAACTACGAATGAAAAGGATCATGTTCCTGGAATGATGCGTGATTTGAATTTTAGGATGTCTGTGCCATCTCCTATGAATCCACTAACTCCACCTACCTCTCAAGGAGGTGCCTCAGATGCACAAGCTCATGATGAGATTAATGTTCCCGATTTTGTGGTCCGTGAAAGTCCACCCATACAGCAGCCACAACGGAGAGGAAGAAAAAGAAAACAATTCTTTGATGAACCCATAGTGTTAACAAATGGATTCATGAGGAGTGCACTTAATAACACTCGTGATATACTGCGGAAAAGAAGGGATGTTCCTTCATCTAGTTTGGGTACCTGGAAATTGAACAATATTCGAAGAAAAGAACACATTTTTGACCAGCCCTTGTTAACTGGGATTGGCAAGGATCTTTTGGACATATCCAAAAGTGAATATGTACGTTCAAGATCTCATTTGGTCATCTTTGAGGAAGATCATGCAGATGTTAGGATGGGTGAAGAAACTCTTTCTCCAACTAACGAACCCCCTGAAGAATCATTAGCTGCTACTAATGAACCCCCTGAAGAGCCAATAGCTGCTACTAACCAACCCCCTGAAGAGCCAATAGCTGCTACTGACCATCCCCATGAAGAGCCAATAGCTACTACTGACCAAACCTCTGAAGAGGCAATAACTGCTACTTCTCCTGTTACTGATATGCAAGTTGAACACAATCGAAATGTTGCTGTCACCCCCCCTGCCACCGCCCAAGCACCACATGAAGATGATTATACGAGCCCTAATAGAAGAGATTGCTTCAATATGCCTTCATCTCATAACATATCCATTGCTTCTTTGAATACAAATATTGCATCTGAGAGAATGCATACATTAGATTATGCAGTGTCACCTGGAGTTCATGGATTGGAGGCAATGCAAACACCAGATTCAGATACTCATGACTTGATGAGTTCTGATAAAACAGATGAGTTTTGGTTTCTGAAATTGGACAGCACCACACCAGCCAGTTCACAAGGTACAAGTGGAAGTAACAAGACATTGTCTGAAAGGACCAAGCATGCAGCTCAATATTTTGAAAGACTTTCTTCAATCTCCCCAATTTTGGAGGAACCTGCTGGAGATCTCAGCTTAAACAAGATCTTGAAAGGGAAAACTAAAAATATTGCCGCTCGTATGTTCTTTGAAGTATTGGTTTTGAAGACTAATGGACTTCTTGATGTACAACAAGAAGAACCTTATGGTGATGTCAGCTTGAAGTTGGTCCCTATGCTTTGA

>Glyma.08g151600.2 sequence-type=CDS polypeptide=Glyma.08g151600.2.p locus=Glyma.08g151600 ID=Glyma.08g151600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTTTATTCTCAAACCTTTTTGGCGCGAAAGGGCCCACTCTCCACCGTGTGGATCGCCGCTCACCTCCAACACCGCCTCAAGAAATCGCACTACACCGCCACCGACATCCCCTCCACCGTCCTGCGAATCATGGACCCCGGTGTCCCCATAGCGCTGCGAATGTCGGGACACCTTCTCCTCGGCGTCGTGAGGATATACTCCAAGAAAGTGGAATACCTTCACCAGGACTGCAAGGATGCACTCACCGGTCTCCACAAGGCGTTCGCCACGCTTCAGTTCGCCCAGCCGGAGGAGGCCAGGCCGGCACCGTTTCAATCGGTGACTCTCCCCGGAACGTTCGACCTCGATGCGCAAAACATAGACGACCAAATAGAGTACATCAGGGCTGAGGATCTTCACATGAGGAATCCAGAAGACATCACGCTGACAGATCTAATTCCTGTCACAATGGATGAGTATGTAGCTGTATCTTTTGATGAGGATATAATAATGGATTCTTCGCGTACAGAAGTGCTGCCTGATTCTGGGGGGACTGTACCAATGGAGGACATTATTCCCCAATCTCCATTGAGCAATGCGGTGGGTGCTGAAGATCATGGTCCAAGTGTTCACAGTCCTTCACAGGCAATCCAACCCGAGCCATTTGAGCTTCTTCGTCGCACTGCCAACAATGACAATATTCAAGTATTTCAGCATTCTGGTGGATTGTGTCCCAGTGTTCACAGTCCTTCACAGGGAACCCAAGTTGAGGTTGGTCGGGATGCCAACAATGATGATAATGTAGAAAACCCTCAGGTATTTACAAATCGTGAGGATAATGATGTTGCTGAACCAAACGGAGGTCTTGACCAAACTACGAATGAAAAGGATCATGTTCCTGGAATGATGCGTGATTTGAATTTTAGGATGTCTGTGCCATCTCCTATGAATCCACTAACTCCACCTACCTCTCAAGGAGGTGCCTCAGATGCACAAGCTCATGATGAGATTAATGTTCCCGATTTTGTGGTCCGTGAAAGTCCACCCATACAGCAGCCACAACGGAGAGGAAGAAAAAGAAAACAATTCTTTGATGAACCCATAGTGTTAACAAATGGATTCATGAGGAGTGCACTTAATAACACTCGTGATATACTGCGGAAAAGAAGGGATGTTCCTTCATCTAGTTTGGGTACCTGGAAATTGAACAATATTCGAAGAAAAGAACACATTTTTGACCAGCCCTTGTTAACTGGGATTGGCAAGGATCTTTTGGACATATCCAAAAGTGAATATGTACGTTCAAGATCTCATTTGGTCATCTTTGAGGAAGATCATGCAGATGTTAGGATGGGTGAAGAAACTCTTTCTCCAACTAACGAACCCCCTGAAGAATCATTAGCTGCTACTAATGAACCCCCTGAAGAGCCAATAGCTGCTACTAACCAACCCCCTGAAGAGCCAATAGCTGCTACTGACCATCCCCATGAAGAGCCAATAGCTACTACTGACCAAACCTCTGAAGAGGCAATAACTGCTACTTCTCCTGTTACTGATATGCAAGTTGAACACAATCGAAATGTTGCTGTCACCCCCCCTGCCACCGCCCAAGCACCACATGAAGATGATTATACGAGCCCTAATAGAAGAGATTGCTTCAATATGCCTTCATCTCATAACATATCCATTGCTTCTTTGAATACAAATATTGCATCTGAGAGAATGCATACATTAGATTATGCAGTGTCACCTGGAGTTCATGGATTGGAGGCAATGCAAACACCAGATTCAGATACTCATGACTTGATGAGTTCTGATAAAACAGATGAGTTTTGGTTTCTGAAATTGGACAGCACCACACCAGCCAGTAGGTTCTCTCTCAATGCCATCTTCAGTTTGATTTTCCTGTGA

Predicted protein sequences of Glyma.08g151600

Limit To All Plant Sequences

>Glyma.08g151600.1.p sequence-type=predicted peptide transcript=Glyma.08g151600.1 locus=Glyma.08g151600 ID=Glyma.08g151600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MFYSQTFLARKGPLSTVWIAAHLQHRLKKSHYTATDIPSTVLRIMDPGVPIALRMSGHLLLGVVRIYSKKVEYLHQDCKDALTGLHKAFATLQFAQPEEARPAPFQSVTLPGTFDLDAQNIDDQIEYIRAEDLHMRNPEDITLTDLIPVTMDEYVAVSFDEDIIMDSSRTEVLPDSGGTVPMEDIIPQSPLSNAVGAEDHGPSVHSPSQAIQPEPFELLRRTANNDNIQVFQHSGGLCPSVHSPSQGTQVEVGRDANNDDNVENPQVFTNREDNDVAEPNGGLDQTTNEKDHVPGMMRDLNFRMSVPSPMNPLTPPTSQGGASDAQAHDEINVPDFVVRESPPIQQPQRRGRKRKQFFDEPIVLTNGFMRSALNNTRDILRKRRDVPSSSLGTWKLNNIRRKEHIFDQPLLTGIGKDLLDISKSEYVRSRSHLVIFEEDHADVRMGEETLSPTNEPPEESLAATNEPPEEPIAATNQPPEEPIAATDHPHEEPIATTDQTSEEAITATSPVTDMQVEHNRNVAVTPPATAQAPHEDDYTSPNRRDCFNMPSSHNISIASLNTNIASERMHTLDYAVSPGVHGLEAMQTPDSDTHDLMSSDKTDEFWFLKLDSTTPASSQGTSGSNKTLSERTKHAAQYFERLSSISPILEEPAGDLSLNKILKGKTKNIAARMFFEVLVLKTNGLLDVQQEEPYGDVSLKLVPML*

>Glyma.08g151600.2.p sequence-type=predicted peptide transcript=Glyma.08g151600.2 locus=Glyma.08g151600 ID=Glyma.08g151600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MFYSQTFLARKGPLSTVWIAAHLQHRLKKSHYTATDIPSTVLRIMDPGVPIALRMSGHLLLGVVRIYSKKVEYLHQDCKDALTGLHKAFATLQFAQPEEARPAPFQSVTLPGTFDLDAQNIDDQIEYIRAEDLHMRNPEDITLTDLIPVTMDEYVAVSFDEDIIMDSSRTEVLPDSGGTVPMEDIIPQSPLSNAVGAEDHGPSVHSPSQAIQPEPFELLRRTANNDNIQVFQHSGGLCPSVHSPSQGTQVEVGRDANNDDNVENPQVFTNREDNDVAEPNGGLDQTTNEKDHVPGMMRDLNFRMSVPSPMNPLTPPTSQGGASDAQAHDEINVPDFVVRESPPIQQPQRRGRKRKQFFDEPIVLTNGFMRSALNNTRDILRKRRDVPSSSLGTWKLNNIRRKEHIFDQPLLTGIGKDLLDISKSEYVRSRSHLVIFEEDHADVRMGEETLSPTNEPPEESLAATNEPPEEPIAATNQPPEEPIAATDHPHEEPIATTDQTSEEAITATSPVTDMQVEHNRNVAVTPPATAQAPHEDDYTSPNRRDCFNMPSSHNISIASLNTNIASERMHTLDYAVSPGVHGLEAMQTPDSDTHDLMSSDKTDEFWFLKLDSTTPASRFSLNAIFSLIFL*

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