SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g130600

Feature Type:gene_model
Chromosome:Gm08
Start:10107703
stop:10111590
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g130600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G13130.1AT JGI N/AIEA
3.2.1.4EC cellulase JGI N/AIEA
GO:0005975GO-bp carbohydrate metabolic process JGI N/AIEA
GO:0004553GO-mf hydrolase activity, hydrolyzing O-glycosyl compounds JGI N/AIEA
PTHR31263PantherFam CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) JGI N/AIEA
PTHR31263:SF0PantherFam CELLULASE DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF00150Pfam Cellulase (glycosyl hydrolase family 5) JGI N/AIEA
PF00652Pfam Ricin-type beta-trefoil lectin domain JGI N/AIEA

Gene model name correspondences to Glyma.08g130600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g13880 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g130600
>Glyma.08g130600.1 sequence-type=CDS polypeptide=Glyma.08g130600.1.p locus=Glyma.08g130600 id=Glyma.08g130600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTAGGTGGAGGCCGAGCACGTTGGTTTTCACTATTCTCTCTGCGCCAATAATAATAATAATAGCATTGCTCTCCTCCGGAGGAACCACCACGGTGGAAGACGTCGACAATGATCACACAATGGCTGTGACGGGTCTGCTTCACACGGATTCCCGATGGATCCTCAACCAAGGTGGGCAAAGGGTGAAGCTTGCATGTGTGAATTGGGTATCCCATTTGGAAGTTGCGGTGGCCGAAGGGCTCAGCAAAAAGCCCGTAGATGCGATTTCAAAGGGAATAAAGTCCATGGGCTTCAACTGTGTCAGGCTCACTTGGCCCACACTTTTGGCCACCAACGACTCTCTCGCTTCTCTCAGCGTTAGACGTTCTTTTCAGAGCCTTGGCCTCCTTGAATCCGTTGCTGGTGTCCAAACCAACAACCCCTCCATCATCGACCTTCCCCTCATCCAAGCTTTTCAGGCAGTGGTGAAGAGTCTCGGGGACAACGATGTGATGGTGATTTTGGACAACCACCTGACCAACCCAGGATGGTGCTGTGGTTACTCCGACGGCAATGGCTTCTTCGGTGACAAATTTTTCAACCCAGACCAGTGGATATTCGGCCTCACCAAGATGGCCACCCTTTTCAATGGTGTCACTAATGTCGTGGGCATGAGCTTGAGGAATGAGCTCCGGGGGCCCAAACAGAATGTCAACGATTGGTACAAGTACATGGTGAAGGGAGCAGAAGCTGTTCATGCAGCAAATCCAGATGTTCTAGTCATTCTATCTGGGATAAATTTTGACACAAGCTTGTCATTCATTCGGGACAGACCAGTGAGCCTCACGTTCAAAGGGAAGCTAGTATTTGAGGTGCACAGGTATGGCTTCACTGATGGTGGAGCTTGGGCTGATGGGAACCCAAACCAAGTATGTGGAAAAGTGACTGCAGATATAAAGCAAACATCTACCTTCTTAGTGGACCAAGGATGGCCATTGTTTGTGAGTGAATTTGGTGGAGACTTGAGAGGTACCAATGTGAATGACAATCGATACCTTAACTGTTTTCTGGCACTGGTAGCTGAGCTTGACTTGGATTGGGCCTATTGGACTCTTGTTGGTAGTTACTACTTTAGAGAAGGGGTTATAGGAATGGAAGAGTTTTATGGCCTTCTCACTTGGGATTGGACTCAGGTTAGGAGTACCAGTTTCTTAAATAGAATCTCTGCCCTCCAAATTCCATTTCGAGGACCAGGCATCATAGAAGGCAGTGCATACAAACTGATATTCCACCCTTTGACAGGTCTCTGTGTCATAAGTAAATCACAGCTAACATCACTAACGTTGGGTCCTTGCTCTTCTTCTGATGCCTGGACATACACACCTCAAAAGACCCTATTGATAAACAATACAAATTTCTGCATACATGCAGAGCAAGAAGGAAAGCCTGCAACACTTAGCATAACATGCTCAGATGCTAACTCTAAATGGGAAATGATCTCAGATTCGAACATGCACCTTTCATCTAAACTAAGCGACGGTTCTAATTTATGTCTAGACGTAGATGATAACAACATCATTGTGACCACTGCTTGTAAATGCTTGAACCAAGATAAGACATGTGACCCTGCAAGCCAATGGTTCAAACTTATTGATAGCGGAAGGAGGTCAATCTCGACAACCTCAACATTATCCATGCTGAATTCACCGGACATTTTGTGGCAACCATTGAGCTCTATATAA
Predicted protein sequences of Glyma.08g130600
>Glyma.08g130600.1.p sequence-type=predicted peptide transcript=Glyma.08g130600.1 locus=Glyma.08g130600 id=Glyma.08g130600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGRWRPSTLVFTILSAPIIIIIALLSSGGTTTVEDVDNDHTMAVTGLLHTDSRWILNQGGQRVKLACVNWVSHLEVAVAEGLSKKPVDAISKGIKSMGFNCVRLTWPTLLATNDSLASLSVRRSFQSLGLLESVAGVQTNNPSIIDLPLIQAFQAVVKSLGDNDVMVILDNHLTNPGWCCGYSDGNGFFGDKFFNPDQWIFGLTKMATLFNGVTNVVGMSLRNELRGPKQNVNDWYKYMVKGAEAVHAANPDVLVILSGINFDTSLSFIRDRPVSLTFKGKLVFEVHRYGFTDGGAWADGNPNQVCGKVTADIKQTSTFLVDQGWPLFVSEFGGDLRGTNVNDNRYLNCFLALVAELDLDWAYWTLVGSYYFREGVIGMEEFYGLLTWDWTQVRSTSFLNRISALQIPFRGPGIIEGSAYKLIFHPLTGLCVISKSQLTSLTLGPCSSSDAWTYTPQKTLLINNTNFCIHAEQEGKPATLSITCSDANSKWEMISDSNMHLSSKLSDGSNLCLDVDDNNIIVTTACKCLNQDKTCDPASQWFKLIDSGRRSISTTSTLSMLNSPDILWQPLSSI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo