Report for Sequence Feature Glyma.08g109400
| Feature Type: | gene_model |
| Chromosome: | Gm08 |
| Start: | 8392293 |
| stop: | 8393914 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
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Annotations for Glyma.08g109400
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT5G13930.1 | AT |
ATCHS,CHS,TT4 |
JGI | N/A | IEA |
| 2.3.1.74 | EC |
chalcone synthase |
JGI | N/A | IEA |
| GO:0008610 | GO-bp |
lipid biosynthetic process |
JGI | N/A | IEA |
| GO:0016747 | GO-mf |
acyltransferase activity, transferring groups other than amino-acyl groups |
JGI | N/A | IEA |
| K00660 | KEGG |
Polyketide biosynthesis proteins |
JGI | N/A | IEA |
| PTHR11877 | PantherFam |
HYDROXYMETHYLGLUTARYL-COA SYNTHASE |
JGI | N/A | IEA |
| PF00195 | Pfam |
Chalcone and stilbene synthases, N-terminal domain |
JGI | N/A | IEA |
| PF08541 | Pfam |
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal |
JGI | N/A | IEA |
Proteins Associated with Glyma.08g109400
| Locus | Gene Symbol | Protein Name |
|---|
| I | CHS1 | chalcone synthase 1 |
| I | GMACHS1 | chalcone synthase 1 |
Gene model name correspondences to Glyma.08g109400 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma08g11620 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.08g109400
>Glyma.08g109400.1 sequence-type=CDS polypeptide=Glyma.08g109400.1.p locus=Glyma.08g109400 id=Glyma.08g109400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTGAGTGTTGAAGAGATTCGTAAGGCGCAACGTGCAGAAGGCCCTGCCACTGTCATGGCTATTGGCACCGCCACTCCTCCCAACTGCGTGGATCAGAGTACCTATCCTGACTATTATTTCCGCATCACCAACAGCGAGCACATGACCGAGCTCAAAGAAAAATTCAAGCGCATGTGTGATAAGTCGATGATTAAGAAGCGATACATGTACTTAAACGAAGAGATCCTGAAAGAGAATCCGAGTGTTTGTGCTTACATGGCACCTTCGTTGGATGCAAGGCAAGACATGGTGGTTGTGGAGGTACCAAAGTTGGGAAAAGAGGCTGCAACTAAGGCAATCAAGGAATGGGGTCAACCCAAGTCCAAGATTACCCATCTCATCTTTTGCACCACTAGTGGTGTCGACATGCCTGGTGCTGATTATCAGCTCACTAAACTATTAGGCCTTCGCCCCTCCGTCAAGCGTTACATGATGTACCAACAAGGCTGCTTTGCCGGTGGCACGGTGCTTCGTTTGGCCAAAGACCTCGCTGAAAACAACAAGGGTGCTCGCGTGCTTGTCGTTTGTTCTGAGATCACCGCAGTCACATTTCGCGGCCCAACTGACACCCATCTTGATAGCCTTGTGGGTCAAGCCTTGTTTGGAGATGGTGCAGCCGCTGTCATTGTTGGATCAGACCCCTTACCAGTTGAAAAGCCTTTGTTTCAGCTTGTCTGGACTGCCCAGACAATCCTTCCAGACAGTGAAGGGGCTATTGATGGACACCTTCGCGAAGTTGGTCTCACTTTCCATCTCCTCAAGGATGTTCCTGGACTCATCTCCAAGAATATTGAGAAGGCCTTGGTTGAAGCCTTCCAACCCTTGGGAATCTCCGATTACAATTCTATCTTCTGGATTGCACACCCTGGTGGACCCGCAATTTTGGACCAAGTTGAGGCTAAGTTAGGCCTGAAGCCTGAAAAAATGGAAGCTACTAGACATGTGCTCAGCGAGTATGGTAACATGTCAAGTGCATGCGTGCTATTCATCTTGGATCAAATGAGGAAGAAATCAATAGAAAATGGACTTGGCACAACCGGTGAAGGTCTTGACTGGGGTGTGCTATTTGGTTTCGGCCCTGGACTCACCGTTGAGACTGTTGTGCTCCGCAGTGTCACTCTCTGA
Predicted protein sequences of Glyma.08g109400
>Glyma.08g109400.1.p sequence-type=predicted peptide transcript=Glyma.08g109400.1 locus=Glyma.08g109400 id=Glyma.08g109400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGSDPLPVEKPLFQLVWTAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEAKLGLKPEKMEATRHVLSEYGNMSSACVLFILDQMRKKSIENGLGTTGEGLDWGVLFGFGPGLTVETVVLRSVTL*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
