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Report for Sequence Feature Glyma.08g108900

Feature Type:gene_model
Chromosome:Gm08
Start:8360676
stop:8363349
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g108900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G13930.1AT SHM4 JGI N/AIEA
2.1.2.1EC glycine hydroxymethyltransferase JGI N/AIEA
GO:0016740GO-mf transferase activity JGI N/AIEA
K00600KEGG Antifolate resistance JGI N/AIEA
PTHR11680PantherFam SERINE HYDROXYMETHYLTRANSFERASE JGI N/AIEA
PTHR11680:SF11PantherFam SERINE HYDROXYMETHYLTRANSFERASE JGI N/AIEA
PF00464Pfam Serine hydroxymethyltransferase JGI N/AIEA

Proteins Associated with Glyma.08g108900
LocusGene SymbolProtein Name
SHMT serine hydroxylmethyltransferase
SHMT08 serine hyrdroxmethyltransferase

Gene model name correspondences to Glyma.08g108900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g11490 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g108900
>Glyma.08g108900.3 sequence-type=CDS polypeptide=Glyma.08g108900.3.p locus=Glyma.08g108900 id=Glyma.08g108900.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATCCAGTAAGCGTGTGGGGTAACACGCCCTTGGCGACGGTGGATCCCGAGATCCATGACCTCATCGAGAAGGAGAAGCGCCGTCAATGCCGCGGAATCGAGCTCATCGCCTCCGAGAACTTCACCTCCTTCGCCGTCATCGAGGCCCTCGGCAGCGCTCTCACGAACAAATACTCCGAGGGCATGCCGGGCAACCGCTACTACGGCGGCAATGAATACATCGACCAGATCGAAAACCTCTGCCGCTCACGCGCCCTCCAAGCCTTCCACCTCGACGCCCAATCCTGGGGCGTCAACGTCCAGCCCTACTCCGGCTCCCCGGCCAACTTCGCCGCCTACACCGCCGTCCTCAACCCCCACGACCGCATCATGGGGCTAGATCTCCCCTCCGGCGGCCACCTCACCCACGGCTACTACACCTCCGGCGGAAAGAAGATCTCCGCCACCTCCATTTACTTCGAGAGTCTCCCTTACAAGGTAAACTCCACCACCGGCTACATCGACTACGACCGCTTGGAAGAAAAAGCCCTAGACTTCAGGCCAAAACTCATAATCTGCGGTGGCAGCGCGTACCCTCGCGATTGGGACTACAAACGTTTCAGGGAAGTCGCTGATAAGTGCGGAGCATTGCTTCTCTGCGACATGGCGCACACTAGCGGCCTTGTGGCCGCGCAGGAAGTGAACAGCCCCTTCGAGTATTGCGACATTGTGACCACCACGACTCACAAGAGCTTGCGGGGCCCACGTGCGGGGATGATCTTTTACCGGAAGGGCCCCAAGCCGCCGAAGAAGGGGCAGCCGGAGAACGCGGTTTATGATTTCGAGGACAAGATTAACTTCGCGGTGTTCCCTTCGCTGCAGGGTGGGCCCCACAACCACCAGATCGGTGCTCTCGCCGTGGCGCTGAAGCAGGCCGCGTCGCCCGGGTTTAAGGCCTACGCGAAGCAGGTTAAGGCGAACGCCGTTGCGCTTGGAAAATACTTGATGGGGAAAGGGTACAGCCTTGTCACTGGCGGAACGGAGAACCATCTTGTTTTGTGGGATCTGAGACCTCTTGGATTGACTGGGAATAAGGTGGAGAAACTCTGTGATCTCTGTAACATTACTGTTAACAAGAACGCTGTTTTTGGTGATAGCAGTGCCTTGGCCCCTGGTGGAGTGCGAATTGGTGCCCCTGCCATGACTTCTAGGGGTTTGGTTGAAAAAGACTTTGAGCAGATTGGTGAGTTCCTTCACCGTGCTGTGACTCTCACACTGGAGATCCAGAAGGAGCATGGCAAACTTCTCAAGGATTTCAACAAGGGTCTCGTCAACAACAAGGCTATTGAAGATCTCAAAGCTGATGTTGAGAAGTTCTCTGCCTTGTTTGACATGCCTGGCTTCCTGGTATCTGAAATGAAGTACAAGGATTAG

>Glyma.08g108900.5 sequence-type=CDS polypeptide=Glyma.08g108900.5.p locus=Glyma.08g108900 id=Glyma.08g108900.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATCCAGTAAGCGTGTGGGGTAACACGCCCTTGGCGACGGTGGATCCCGAGATCCATGACCTCATCGAGAAGGAGAAGCGCCGTCAATGCCGCGGAATCGAGCTCATCGCCTCCGAGAACTTCACCTCCTTCGCCGTCATCGAGGCCCTCGGCAGCGCTCTCACGAACAAATACTCCGAGGGCATGCCGGGCAACCGCTACTACGGCGGCAATGAATACATCGACCAGATCGAAAACCTCTGCCGCTCACGCGCCCTCCAAGCCTTCCACCTCGACGCCCAATCCTGGGGCGTCAACGTCCAGCCCTACTCCGGCTCCCCGGCCAACTTCGCCGCCTACACCGCCGTCCTCAACCCCCACGACCGCATCATGGGGCTAGATCTCCCCTCCGGCGGCCACCTCACCCACGGCTACTACACCTCCGGCGGAAAGAAGATCTCCGCCACCTCCATTTACTTCGAGAGTCTCCCTTACAAGGTAAACTCCACCACCGGCTACATCGACTACGACCGCTTGGAAGAAAAAGCCCTAGACTTCAGGCCAAAACTCATAATCTGCGGTGGCAGCGCGTACCCTCGCGATTGGGACTACAAACGTTTCAGGGAAGTCGCTGATAAGTGCGGAGCATTGCTTCTCTGCGACATGGCGCACACTAGCGGCCTTGTGGCCGCGCAGGAAGTGAACAGCCCCTTCGAGTATTGCGACATTGTGACCACCACGACTCACAAGAGCTTGCGGGGCCCACGTGCGGGGATGATCTTTTACCGGAAGGGCCCCAAGCCGCCGAAGAAGGGGCAGCCGGAGAACGCGGTTTATGATTTCGAGGACAAGATTAACTTCGCGGTGTTCCCTTCGCTGCAGGGTGGGCCCCACAACCACCAGATCGGTGCTCTCGCCGTGGCGCTGAAGCAGGCCGCGTCGCCCGGGTTTAAGGCCTACGCGAAGCAGGTTAAGGCGAACGCCGTTGCGCTTGGAAAATACTTGATGGGGAAAGGGTACAGCCTTGTCACTGGCGGAACGGAGAACCATCTTGTTTTGTGGGATCTGAGACCTCTTGGATTGACTGGGAATAAGGTGGAGAAACTCTGTGATCTCTGTAACATTACTGTTAACAAGAACGCTGTTTTTGGTGATAGCAGTGCCTTGGCCCCTGGTGGAGTGCGAATTGGTAACGATCTTACTTCTCTTTTATATGCTACAATACAAATCTTGCTTTACTAA
Predicted protein sequences of Glyma.08g108900
>Glyma.08g108900.3.p sequence-type=predicted peptide transcript=Glyma.08g108900.3 locus=Glyma.08g108900 id=Glyma.08g108900.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDPVSVWGNTPLATVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEYIDQIENLCRSRALQAFHLDAQSWGVNVQPYSGSPANFAAYTAVLNPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSTTGYIDYDRLEEKALDFRPKLIICGGSAYPRDWDYKRFREVADKCGALLLCDMAHTSGLVAAQEVNSPFEYCDIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPENAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAASPGFKAYAKQVKANAVALGKYLMGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLHRAVTLTLEIQKEHGKLLKDFNKGLVNNKAIEDLKADVEKFSALFDMPGFLVSEMKYKD*

>Glyma.08g108900.5.p sequence-type=predicted peptide transcript=Glyma.08g108900.5 locus=Glyma.08g108900 id=Glyma.08g108900.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDPVSVWGNTPLATVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEYIDQIENLCRSRALQAFHLDAQSWGVNVQPYSGSPANFAAYTAVLNPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSTTGYIDYDRLEEKALDFRPKLIICGGSAYPRDWDYKRFREVADKCGALLLCDMAHTSGLVAAQEVNSPFEYCDIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPENAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAASPGFKAYAKQVKANAVALGKYLMGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGNDLTSLLYATIQILLY*






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