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Report for Sequence Feature Glyma.08g105400

Feature Type:gene_model
Chromosome:Gm08
Start:8114013
stop:8126764
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g105400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G03710.3AT AGL3,SEP4 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003700GO-mf DNA-binding transcription factor activity JGI N/AIEA
GO:0046983GO-mf protein dimerization activity JGI N/AIEA
KOG0014 KOG MADS box transcription factor JGI N/AIEA
PTHR11945PantherFam MADS BOX PROTEIN JGI N/AIEA
PF00319Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) JGI N/AIEA
PF01486Pfam K-box region JGI N/AIEA

Proteins Associated with Glyma.08g105400
LocusGene SymbolProtein Name
AGL3L agamous-like MADS-box protein AGL3-like

Gene model name correspondences to Glyma.08g105400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g11110 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g105400
>Glyma.08g105400.1 sequence-type=CDS polypeptide=Glyma.08g105400.1.p locus=Glyma.08g105400 id=Glyma.08g105400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGAAGAAGAAGGTGGAGATAAAGCGAATCGAGAACAAAAGCACTCGGCAGATAACATTCTCCAAGAGGCGCAATGGATTGATGAAGAAAGCTCGCGAGCTATCCATTCTCTGCGATGCGAAGGTGGCGCTGCTCATCTTCTCCAGCACCGGAAAGCTCTACGAGCTCTGCAACGGTGACAGTTTGGCCGAGGTCGTGCAGCAATATTGGGATCATTTAGGAGCGAGCGGTACTGACACAAAGTCGCAGGAACTATGCTTTGAAATTGCAGATATCTGGTCTGGTTCAGCGTTTTCTCAAATGATCAAAAGGCACTTCGGTGTTTCTGAACTTGAGCATCTGAGTGTGTCTGACCTTATGGAACTAGAGAAACTGACTCATGCTGCTCTTTCGCGAATCAGATCAGCAAAGATGCGATTGATGATGGAATCTGTAGTGAATCTTAAGAAAAAGATTGAGGCACTAGAAAAAACTAATGACGTCAATAACGTGGTGACACGGTCTATTGACTGTGATCAAACAGATGGGGTGACGCATAATCTGTTCCCAGGTCTCTAA
Predicted protein sequences of Glyma.08g105400
>Glyma.08g105400.1.p sequence-type=predicted peptide transcript=Glyma.08g105400.1 locus=Glyma.08g105400 id=Glyma.08g105400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGKKKVEIKRIENKSTRQITFSKRRNGLMKKARELSILCDAKVALLIFSSTGKLYELCNGDSLAEVVQQYWDHLGASGTDTKSQELCFEIADIWSGSAFSQMIKRHFGVSELEHLSVSDLMELEKLTHAALSRIRSAKMRLMMESVVNLKKKIEALEKTNDVNNVVTRSIDCDQTDGVTHNLFPGL*






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