Glyma.08g093700

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Report for Sequence Feature Glyma.08g093700

Feature Type:	gene_model
Chromosome:	Gm08
Start:	7097206
stop:	7101441
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.08g093700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G68080.1	AT	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	JGI	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	EnsemblGenomes	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	JGI	N/A	IEA
GO:0005506	GO-mf	iron ion binding	EnsemblGenomes	N/A	IEA
GO:0016491	GO-mf	oxidoreductase activity	EnsemblGenomes	N/A	IEA
GO:0016491	GO-mf	oxidoreductase activity	JGI	N/A	IEA
GO:0016705	GO-mf	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	EnsemblGenomes	N/A	IEA
GO:0016706	GO-mf	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	JGI	N/A	IEA
GO:0031418	GO-mf	L-ascorbic acid binding	EnsemblGenomes	N/A	IEA
GO:0046872	GO-mf	metal ion binding	EnsemblGenomes	N/A	IEA
GO:0051213	GO-mf	dioxygenase activity	EnsemblGenomes	N/A	IEA
PTHR14049	Panther	LEPRECAN 1	JGI	N/A	IEA
PTHR14049:SF7	Panther		JGI	N/A	IEA
GN7V-67227	SoyCyc9-rxn	procollagen-proline 3-dioxygenase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.08g093700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.08g093700 not represented in the dataset	Glyma.08g093700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.08g093700

Paralog	Evidence	Comments
Glyma.05g138500	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.08g093700 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma08g09920	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.08g093700

Limit To All Plant Sequences

>Glyma.08g093700.2 sequence-type=transcript locus=Glyma.08g093700 ID=Glyma.08g093700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGCCCTAACCCGGGTGAGAAAGGTGGGTATAAAGTACGTGACAAAGTGGGACTGCGGAAGCAGTCAGCAATTACGCTGAGAGTAAAGTACATGCGAATCCGATCCGTAGGTAATAATAACATTTGAAGAAACACAAACACACGACAGAGTTCAGTAGCAATGGCCGTGGTTGAGTTTGAACCTCAACAACTACGCCTCTTCATCCCCAACTTCCTCTCCCTCGATGAATGCAAAAGTAGCAGCACGGTGGGTTACAGACCCAATGTCTTCTCCACCACTCTCTCCCATCTCATTGCTACCAACTCTTCCCACTTCATCATTCCTTTTATACCCATCAGAGAAAGGTTGAAAGACAAGTTAGAGGAGTTTTTCAAGTGTGAGTATGAGCTCTTCATTGAATTCACTGGTTTAATCAGTTGGAGTAGAGGAGCAAGCATTGGATGGCATAGTGATGATAACAGGCCCTACCTCAAACAACGCCACTTCTCAGCAGTATGCTATTTGAATACTTATGGCAAGGATTTCAGTGGTGGACTCTTTCACTTCCAGGATGGTGAGCCCAAGTCAATTGTGCCAAAAGCCGGAGATGTTGTGATGTACACAGCTGATGACCGTAACATTCATTCTGTTGATGAGATAACTGAGGGAGAAAGGCTCACACTTGCTTTATGGTTCAGTCGTGATGGCTCCCATGATGAGGATATGAAGCTCATTTCTCTTCTTTCACAACACCTGCTACATGAGAACGTGGCTGATTCATACCTACCTTTGCCAGCATCCAGTAATATGTACTGGTTTTCTAAGGACCAAGCTTCCAATTATCAATTCGGTTTTAATATATCCTGGGCTAGACTGCATGTTCTTGGATACGACATATATATTTCTCAAGACAGTAGCTGTGAGTCTGATGTCTTTGAATTACTGGTAAAGCCAGTGCGTTTAGTGAGGGATAATGAGTTGTTAGACCAGGAATTCGTCAATATTATGCATGCACTTCAGGTTGTCCATTTCTATTGTTGGAAAGGATCAGCTTTACTGAACAACATGTCAAATATAGACTCCAAGGTACTAAAAGTGACAGAGGTACAGAGAGAGAAAATCAGTGGTCTGAATTCTGTACTTTTGAATGATAATGATTTTGCATCCAAAGTTTTCTGTAATATGCCTTCGGAAGAAAAGGGATGCATTTGCTTTGACTGGTCAGAAGTTCTAGCTGCAGTTGCTGCTTGGGAAGATTATGCGTCAAACTTAAGCAAACAAATTCATTTACAGTTGCCTTACTGGAGAATGCATGAGTCTATATATAATGTGCAATTAGAGTAGTATTTGTGATCAACAATTCCAAGAAAAAGTAACCACCTACAATTGTGCTTGGGTTAAAAATTTGGAGAAAAGCACTGTTGAAACAACTAAAAAGTAGTTTGTGAAGGTTTGCTTTGATAGCATTATTCAATTTAATGTGCTTTGGGAAAGTTTTAAGGCAAAGCTTCTTGGGAAGAAATGAGAAATGTGACTAACAGATATCTCGAGATTTATCATAAATTTAAGTGTTATGCATACTTGATGTAGATTGGGTTGCCCTGCTAAGTGACTCATGATTTTTCTGCATCAATACTAGGTTGCAAATACTACAATGTACTGTATGCCTTTGTTTCTCAAACTTCGGTAGCACGTGTTTGGGTGCAATATTACAGCTACTGCAAGACCATTAGGACTTCTCTAAACGTTCTTTTTTCTTCTTTACTTTGTTACAAATAGTACATTTTTAAAGTTGTCCTATTTGCCAGCCATAGGGACCTCCATTTTCATAACATAGAGCTGGTAATGTGTGTACTTTAGCTTATTATATCCAGGCTGCTACGTTACGGTCTTTGGATATGCTCCATGTATGCAAAACTTTGCCAAAAGCATCATAAAATATGATATATGCAGTGCTTTTGGTGATCTGCATAGACATGAATCCTTGCCCATCATAATACAACTTCAGTTCTTCCAGTTTCCACGGCTTGACATCGCCTGACCATGCCTTTGATCCCCCTCCACTTGTTATAAAGTGAATTCCACTAGATTGTTTATGCAAACCACAAAAGCTTGAATGTCAGAACAGTGACGGTGTTGAAGCTAACCATTTAA

Coding sequences of Glyma.08g093700

Limit To All Plant Sequences

>Glyma.08g093700.1 sequence-type=CDS polypeptide=Glyma.08g093700.1.p locus=Glyma.08g093700 ID=Glyma.08g093700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCGTGGTTGAGTTTGAACCTCAACAACTACGCCTCTTCATCCCCAACTTCCTCTCCCTCGATGAATGCAAAGAATTGGAATTCATCCATAAGAGTAGCAGCACGGTGGGTTACAGACCCAATGTCTTCTCCACCACTCTCTCCCATCTCATTGCTACCAACTCTTCCCACTTCATCATTCCTTTTATACCCATCAGAGAAAGGTTGAAAGACAAGTTAGAGGAGTTTTTCAAGTGTGAGTATGAGCTCTTCATTGAATTCACTGGTTTAATCAGTTGGAGTAGAGGAGCAAGCATTGGATGGCATAGTGATGATAACAGGCCCTACCTCAAACAACGCCACTTCTCAGCAGTATGCTATTTGAATACTTATGGCAAGGATTTCAGTGGTGGACTCTTTCACTTCCAGGATGGTGAGCCCAAGTCAATTGTGCCAAAAGCCGGAGATGTTGTGATGTACACAGCTGATGACCGTAACATTCATTCTGTTGATGAGATAACTGAGGGAGAAAGGCTCACACTTGCTTTATGGTTCAGTCGTGATGGCTCCCATGATGAGGATATGAAGCTCATTTCTCTTCTTTCACAACACCTGCTACATGAGAACGTGGCTGATTCATACCTACCTTTGCCAGCATCCAGTAATATGTACTGGTTTTCTAAGGACCAAGCTTCCAATTATCAATTCGGTTTTAATATATCCTGGGCTAGACTGCATGTTCTTGGATACGACATATATATTTCTCAAGACAGTAGCTGTGAGTCTGATGTCTTTGAATTACTGGTAAAGCCAGTGCGTTTAGTGAGGGATAATGAGTTGTTAGACCAGGAATTCGTCAATATTATGCATGCACTTCAGGTTGTCCATTTCTATTGTTGGAAAGGATCAGCTTTACTGAACAACATGTCAAATATAGACTCCAAGGTACTAAAAGTGACAGAGGTACAGAGAGAGAAAATCAGTGGTCTGAATTCTGTACTTTTGAATGATAATGATTTTGCATCCAAAGTTTTCTGTAATATGCCTTCGGAAGAAAAGGGATGCATTTGCTTTGACTGGTCAGAAGTTCTAGCTGCAGTTGCTGCTTGGGAAGATTATGCGTCAAACTTAAGCAAACAAATTCATTTACAGTTGCCTTACTGGAGAATGCATGAGTCTATATATAATGTGCAATTAGAGTAG

>Glyma.08g093700.2 sequence-type=CDS polypeptide=Glyma.08g093700.2.p locus=Glyma.08g093700 ID=Glyma.08g093700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCGTGGTTGAGTTTGAACCTCAACAACTACGCCTCTTCATCCCCAACTTCCTCTCCCTCGATGAATGCAAAAGTAGCAGCACGGTGGGTTACAGACCCAATGTCTTCTCCACCACTCTCTCCCATCTCATTGCTACCAACTCTTCCCACTTCATCATTCCTTTTATACCCATCAGAGAAAGGTTGAAAGACAAGTTAGAGGAGTTTTTCAAGTGTGAGTATGAGCTCTTCATTGAATTCACTGGTTTAATCAGTTGGAGTAGAGGAGCAAGCATTGGATGGCATAGTGATGATAACAGGCCCTACCTCAAACAACGCCACTTCTCAGCAGTATGCTATTTGAATACTTATGGCAAGGATTTCAGTGGTGGACTCTTTCACTTCCAGGATGGTGAGCCCAAGTCAATTGTGCCAAAAGCCGGAGATGTTGTGATGTACACAGCTGATGACCGTAACATTCATTCTGTTGATGAGATAACTGAGGGAGAAAGGCTCACACTTGCTTTATGGTTCAGTCGTGATGGCTCCCATGATGAGGATATGAAGCTCATTTCTCTTCTTTCACAACACCTGCTACATGAGAACGTGGCTGATTCATACCTACCTTTGCCAGCATCCAGTAATATGTACTGGTTTTCTAAGGACCAAGCTTCCAATTATCAATTCGGTTTTAATATATCCTGGGCTAGACTGCATGTTCTTGGATACGACATATATATTTCTCAAGACAGTAGCTGTGAGTCTGATGTCTTTGAATTACTGGTAAAGCCAGTGCGTTTAGTGAGGGATAATGAGTTGTTAGACCAGGAATTCGTCAATATTATGCATGCACTTCAGGTTGTCCATTTCTATTGTTGGAAAGGATCAGCTTTACTGAACAACATGTCAAATATAGACTCCAAGGTACTAAAAGTGACAGAGGTACAGAGAGAGAAAATCAGTGGTCTGAATTCTGTACTTTTGAATGATAATGATTTTGCATCCAAAGTTTTCTGTAATATGCCTTCGGAAGAAAAGGGATGCATTTGCTTTGACTGGTCAGAAGTTCTAGCTGCAGTTGCTGCTTGGGAAGATTATGCGTCAAACTTAAGCAAACAAATTCATTTACAGTTGCCTTACTGGAGAATGCATGAGTCTATATATAATGTGCAATTAGAGTAG

Predicted protein sequences of Glyma.08g093700

Limit To All Plant Sequences

>Glyma.08g093700.1.p sequence-type=predicted peptide transcript=Glyma.08g093700.1 locus=Glyma.08g093700 ID=Glyma.08g093700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAVVEFEPQQLRLFIPNFLSLDECKELEFIHKSSSTVGYRPNVFSTTLSHLIATNSSHFIIPFIPIRERLKDKLEEFFKCEYELFIEFTGLISWSRGASIGWHSDDNRPYLKQRHFSAVCYLNTYGKDFSGGLFHFQDGEPKSIVPKAGDVVMYTADDRNIHSVDEITEGERLTLALWFSRDGSHDEDMKLISLLSQHLLHENVADSYLPLPASSNMYWFSKDQASNYQFGFNISWARLHVLGYDIYISQDSSCESDVFELLVKPVRLVRDNELLDQEFVNIMHALQVVHFYCWKGSALLNNMSNIDSKVLKVTEVQREKISGLNSVLLNDNDFASKVFCNMPSEEKGCICFDWSEVLAAVAAWEDYASNLSKQIHLQLPYWRMHESIYNVQLE*

>Glyma.08g093700.2.p sequence-type=predicted peptide transcript=Glyma.08g093700.2 locus=Glyma.08g093700 ID=Glyma.08g093700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAVVEFEPQQLRLFIPNFLSLDECKSSSTVGYRPNVFSTTLSHLIATNSSHFIIPFIPIRERLKDKLEEFFKCEYELFIEFTGLISWSRGASIGWHSDDNRPYLKQRHFSAVCYLNTYGKDFSGGLFHFQDGEPKSIVPKAGDVVMYTADDRNIHSVDEITEGERLTLALWFSRDGSHDEDMKLISLLSQHLLHENVADSYLPLPASSNMYWFSKDQASNYQFGFNISWARLHVLGYDIYISQDSSCESDVFELLVKPVRLVRDNELLDQEFVNIMHALQVVHFYCWKGSALLNNMSNIDSKVLKVTEVQREKISGLNSVLLNDNDFASKVFCNMPSEEKGCICFDWSEVLAAVAAWEDYASNLSKQIHLQLPYWRMHESIYNVQLE*

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