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Report for Sequence Feature Glyma.08g092000

Feature Type:gene_model
Chromosome:Gm08
Start:6942771
stop:6955699
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.08g092000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G01980.1AT sodium proton exchanger, putative (NHX7) (SOS1) JGI N/AIEA
GO:0006812GO-bp cation transport EnsemblGenomesN/AIEA
GO:0006812GO-bp cation transport JGI N/AIEA
GO:0019538GO-bp protein metabolic process EnsemblGenomesN/AIEA
GO:0051453GO-bp regulation of intracellular pH EnsemblGenomesN/AIEA
GO:0055085GO-bp transmembrane transport EnsemblGenomesN/AIEA
GO:0055085GO-bp transmembrane transport JGI N/AIEA
GO:0071805GO-bp potassium ion transmembrane transport EnsemblGenomesN/AIEA
GO:0098719GO-bp sodium ion import across plasma membrane EnsemblGenomesN/AIEA
GO:1902600GO-bp proton transmembrane transport EnsemblGenomesN/AIEA
GO:0005886GO-cc plasma membrane EnsemblGenomesN/AIEA
GO:0009941GO-cc chloroplast envelope EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
GO:0015297GO-mf antiporter activity EnsemblGenomesN/AIEA
GO:0015299GO-mf solute:proton antiporter activity EnsemblGenomesN/AIEA
GO:0015299GO-mf solute:hydrogen antiporter activity JGI N/AIEA
GO:0015385GO-mf sodium:proton antiporter activity EnsemblGenomesN/AIEA
GO:0015386GO-mf potassium:proton antiporter activity EnsemblGenomesN/AIEA
KOG1965 KOG Sodium/hydrogen exchanger protein JGI N/AIEA
PTHR10110Panther SODIUM/HYDROGEN EXCHANGER JGI N/AIEA
PTHR10110:SF4Panther JGI N/AIEA
PF00027PFAM Cyclic nucleotide-binding domain JGI N/AIEA
PF00999PFAM Sodium/hydrogen exchanger family JGI N/AIEA

Proteins Associated with Glyma.08g092000
LocusGene SymbolProtein Name
SOS1 Na+/H+ antiporter

Expression Patterns of Glyma.08g092000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.08g092000 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g09730 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g092000
>Glyma.08g092000.1 sequence-type=CDS polypeptide=Glyma.08g092000.1.p locus=Glyma.08g092000 ID=Glyma.08g092000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGGAAGAACAACAACAACAACACCTTTCTCTTTCCATTTCACTTTCTGTTGTCTCTGCTGCTTCTTCTTCATCAGAGGAGAATTCCAATCCATCAGATGCAGTGATCTTCTTTGGTCTGAGTTTGGCTCTGGGGATTGCTTGTAGGCACCTCTTGCGTGGGACCAGAGTCCCTTATACTGTTGCCTTACTCATTCTTGGCATTGCACTTGGATCCATAGAATATGGTACTCATCATCGGCTGGGAAAGATTGGGGATGGAATTCGTATTTGGTCAGAGATTGATCCAGATCTTCTTTTAGCTGTTTTTCTTCCTGCTCTCCTTTTTGAGAGCTCATTCTTAATGGAAGTTCACCAAATTAAGAGGTGTCTTGCACAAATGATCTTACTAGCTGGCCCTGGTGTTGCGCTTTCTACTGTTTGTCTAGGAGTTGTTTTAAAGCTTACTTTTCCGTACAACTGGAGTTGGAAAACATCACTGTTGCTTGGAGGACTTCTGAGTGCTACTGATCCTGTTGCTGTTGTGGCTTTGTTGAAAGATCTTGGTGCCAGCAAAAAGCTAAGCACGATAATTGAAGGGGAATCCTTGATGAATGATGGGACTGCTATTGTGGTTTATACTCTTTTCTATCGGATGGTTCTTGGAGAGACCTTCAATTGGGTTGCTATAATCAAATTTCTAGCACAAGTCTCACTTGGAGCTGTAGGAATGGGTCTTGCTTTTGGGATTGCATCTGTTTTGTGGCTTGGGTTTATTTTTAATGATACAGTGATTGAGATTGCTCTAACATTTGCTGTTAGCTACATTGCTTATTTCACTGCTCAGGAGGGTTCAGGTGTTTCTGGTGTCTTGACGGTGATGTCTTTGGGAATGTTCTATTCTGCATTTGCAAGAACAGCTTTTAAGGGTGAAAGTCAACAAAGCTTACATCACTTTTGGGAAATGATCGCTTATATTGCTAATACCTTAATTTTCATTTTGAGTGGAGTTGTTATAGCTGAAGGAATACTTGGTGACGAAAATGTTTTCTATCATGGAACATCATGGACCCACCTCTTGCTTCTCTATGCATATGTTCAAGTGTCCCGGTGCATTGTAGTCGGAGCATTATTTCCCTTTCTAAGATATTTTGGATATGGTTTGGATTGGAAAGAAGCTATTATTCTCATCTGGTCAGGACTGCGAGGCGCAGTTGCCTTGGCACTTTCCTTATCAGTTAAGCGTTCGGGTGGCAAATCATCTGAATTGACTCCAGAGACAGGAACACTGTTTGTTTTCTTCACTGGTGGAACTGTGTTTTTAACACTTATAATAAATGGTTCAACCACACAATTCATTTTACACTACCTTGGCATGGATAAATTGTCAGCTGCTAAGAGACGGATCCTTAACTTCACAAAGTATGAAATGTTGAACAAGGCATTGGAGGCTTTTGGTGAACTTGGAGATGATGAGGAGCTTGGGCCTGCTGACTGGCCTACAGTGAAGAGATATATCTCCTGTTTAAATGACATTGAAGGTGAATGTGTTCACCCTCATGGAGCACCTGAAAATGATAGTAACCTAGATCCTATGAATTTGAAAGACATACGAGTACGCCTTCTGAATGGTGTACAAGCTGCTTACTGGGAGATGCTTGATGAAGGAAGAATTTCTCAAACAACAGCTAATATCCTAATGCTATCTGTCGAGGAAGCAGTAGATTTGGCTTCATCTGAGCCTCTATGTGACTGGAAAGGTTTAAAATCTAACGTCCATTTCCCGAATTACTATAAATTTCTACAGTCCAGTATGTTCCCACCGAAGTTAGTTACGTATTTCACCGTGGAAAGGTTGGAATCTGCATGTTATATTTGTGCTGCATTTCTTCGAGCTCACAGAATTGCCCGACAACAATTACATGACTTCATAGGAGACAGTGATATTGCTTCTGCTGTCATCAATGAAAGTGTTGTGGAAGGAGAAGAAGCACGGAAGTTCCTAGAAGATGTTAATGTTACATACCCTCAGGTTTTGCGTGTTGTAAAAACAAGGCAAGCAACATATGCAGTGCTAAATCATTTAATTGAATATGTTGAAAACCTTGAGAAGGCTGGGATATTGGAAGAGAAAGAGATGCTACAACTCCATGATGCTGTTCAGACTGATTTAAAGAAACTACTAAGAAATCCTCCTTTGGTTAAGCTTCCTAAAATAAGTAGTATCCATCCAATGTTGGGTGCTCTCCCATCTTCAGTTCGTGAATCACTTGCAAGTTGTACCAAGGAAATGATGAAATTGCGTGGTTTGACACTGTACAAGGAAGGTGCCAAATCAAATGGTATTTGGTTAATTTCTAATGGAGTGGTGAAGTGGGAAAGCAAGATGATAAGAACCAAGCACTCTTTTAATCCTACATTTACGCATGGGAGCACATTGGGTATTTATGAAGTGTTGACTGGAAGATCATATATCTGTGATGTCGTCACTGATTCCGTGGTATTCTGCATTTTTCTTGAAGCTGATAAGATAAGATCATGTCTCAAAGCAGATCCTTTGACGGAAAAATTCCTGTGGGAGGAAAGTGCTATTTTCCTTTCCAAATTATTGCTTCCTCAGATATTTGAGAAACTGGGTATGCAAGATTTAAGAACTCTTATTGCGGATTCCGAGAGATCTCGAATGACCATATTCATAAGAGGGGAAACAATAGAAATTCCTCATCATTCAGTTGCCCTCTTACTAGAAGGATATGTCAAAACTCAAGGTCGTCAAGAACTGGTAACAGCACCAGCAGCCCTGCTTCCTTCACATGGGAATCTAAGCTTCCAAAATTTGGCAAGTTCAGGTTCTAAGGAAGCTAGTTTTATTCATCAACAAGGATCTAGTTATCTAGTTGAAACTACAGCAAGAGTAATTCTGTTTGACATTCCAGCACCTGAGGCTGATGCTGCTCTTGTTAGAAGGTCAAGTTCACTGTTATCACATGCCGGGGATCATCCTCATAGATCTTTCCGTCGAAAACATAGTGGTCTTATGAGTTGGCCTGAACATTTCTACAAACAAGACCATAAGCAGAGATCTGAAGGAGCTGGGCGACAAACCAATAGTTTATCTGCAAGGGCAATGCAGCTGAGCATTTATGGGAGCATGGTGGACATCCCTCCCCGGAGTAGAAGTTTGTTAACCAATGATGGTAGACCACCTCATAGCTTGTCCTATCCAACCATTGTGTCACATCAAGGTCGTCCTCTTGTTTCAGTCAAATCAGAAGGAGCTGCAACTGCCAAGAAGGTCCATGAGGTCACAAGACATGTTACAAATCCACCTTCACAAAGCACAGAACGAAGACAGCATCACCATGGAGATAATTCAAGTGATGATTCTGGTGCTGAAGAAGAAGATATTATTGTGAGGATTGACTCACCAAGCACGCTATCTTTTCGCTAG
Predicted protein sequences of Glyma.08g092000
>Glyma.08g092000.1.p sequence-type=predicted peptide transcript=Glyma.08g092000.1 locus=Glyma.08g092000 ID=Glyma.08g092000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEEEQQQQHLSLSISLSVVSAASSSSEENSNPSDAVIFFGLSLALGIACRHLLRGTRVPYTVALLILGIALGSIEYGTHHRLGKIGDGIRIWSEIDPDLLLAVFLPALLFESSFLMEVHQIKRCLAQMILLAGPGVALSTVCLGVVLKLTFPYNWSWKTSLLLGGLLSATDPVAVVALLKDLGASKKLSTIIEGESLMNDGTAIVVYTLFYRMVLGETFNWVAIIKFLAQVSLGAVGMGLAFGIASVLWLGFIFNDTVIEIALTFAVSYIAYFTAQEGSGVSGVLTVMSLGMFYSAFARTAFKGESQQSLHHFWEMIAYIANTLIFILSGVVIAEGILGDENVFYHGTSWTHLLLLYAYVQVSRCIVVGALFPFLRYFGYGLDWKEAIILIWSGLRGAVALALSLSVKRSGGKSSELTPETGTLFVFFTGGTVFLTLIINGSTTQFILHYLGMDKLSAAKRRILNFTKYEMLNKALEAFGELGDDEELGPADWPTVKRYISCLNDIEGECVHPHGAPENDSNLDPMNLKDIRVRLLNGVQAAYWEMLDEGRISQTTANILMLSVEEAVDLASSEPLCDWKGLKSNVHFPNYYKFLQSSMFPPKLVTYFTVERLESACYICAAFLRAHRIARQQLHDFIGDSDIASAVINESVVEGEEARKFLEDVNVTYPQVLRVVKTRQATYAVLNHLIEYVENLEKAGILEEKEMLQLHDAVQTDLKKLLRNPPLVKLPKISSIHPMLGALPSSVRESLASCTKEMMKLRGLTLYKEGAKSNGIWLISNGVVKWESKMIRTKHSFNPTFTHGSTLGIYEVLTGRSYICDVVTDSVVFCIFLEADKIRSCLKADPLTEKFLWEESAIFLSKLLLPQIFEKLGMQDLRTLIADSERSRMTIFIRGETIEIPHHSVALLLEGYVKTQGRQELVTAPAALLPSHGNLSFQNLASSGSKEASFIHQQGSSYLVETTARVILFDIPAPEADAALVRRSSSLLSHAGDHPHRSFRRKHSGLMSWPEHFYKQDHKQRSEGAGRQTNSLSARAMQLSIYGSMVDIPPRSRSLLTNDGRPPHSLSYPTIVSHQGRPLVSVKSEGAATAKKVHEVTRHVTNPPSQSTERRQHHHGDNSSDDSGAEEEDIIVRIDSPSTLSFR*






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