SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g088000

Feature Type:gene_model
Chromosome:Gm08
Start:6674848
stop:6676255
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g088000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G48130.1AT ATPER1,PER1 JGI N/AIEA
1.11.1.15EC JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0016209GO-mf antioxidant activity JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
GO:0051920GO-mf peroxiredoxin activity JGI N/AIEA
KOG0854 KOG Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes JGI N/AIEA
PTHR10681PantherFam THIOREDOXIN PEROXIDASE JGI N/AIEA
PF00578Pfam AhpC/TSA family JGI N/AIEA
PF10417Pfam C-terminal domain of 1-Cys peroxiredoxin JGI N/AIEA

Gene model name correspondences to Glyma.08g088000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g09310 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g088000
>Glyma.08g088000.2 sequence-type=CDS polypeptide=Glyma.08g088000.2.p locus=Glyma.08g088000 id=Glyma.08g088000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTCAGTATGCTAAGGAGTTTTATCAACGAGGAGTGAAGCTCTTAGGTTTATCTTGTGATGATGTGCAATCCCACAATGAGTGGATCAAAGACATTGAAGCCTACACTCCAGGTGCGAAAGTGAATTATCCAATAATTGCTGATCCGAAGAGAGAAATCATCAAGCAACTCAACATGGTTGACCCTGATGAGAAAGACTCCACTGGCAACCTACCCTCAAGGGCTCTTCATATTGTTGGCCCAGATTTGAAGATCAAGCTGAGTTTTCTGTACCCTGCCACTACTGGGAGGAACATGGATGAAGTGCTGAGGGTGATAGAGTCATTGCAGAAGGCCTCAAAGTTCAAGGTTGCTACCCCAGCAAACTGGAAGCCAGGGGACCCTGTTGTCATTACCCCTGATGTCACCAATGAGCAAGCCAAGGAAATGTTCCCTCAAGGGTTCGAGAGTGTGAAACTCCCATCAAAGAAGGAATATTTGCGCTTAACTAAAGTTTGA

>Glyma.08g088000.3 sequence-type=CDS polypeptide=Glyma.08g088000.3.p locus=Glyma.08g088000 id=Glyma.08g088000.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCACGTTCTCTTCATGCAAGCAACTCTCCCCTCTTTATAATCTCACTTGCACACGTTCTGATCAATGACACAAGTAACTTCTCTGCATCCAAAATGCCAGGTCTTACCATCGGAGACACTATTCCTGATCTTCAAGTTGAAACTAACCAAGGCAAAATCAAGCTTCATCAGTTCTGTGCTGATGGCTGGACCATCCTTTTCTCTCACCCAGGTGATTTCACCCCGGTTTGTACCACTGAGCTTGGTAAGATGGCTCAGTATGCTAAGGAGTTTTATCAACGAGGAGTGAAGCTCTTAGGTTTATCTTGTGATGATGTGCAATCCCACAATGAGTGGATCAAAGACATTGAAGCCTACACTCCAGGTGCGAAAGTGAATTATCCAATAATTGCTGATCCGAAGAGAGAAATCATCAAGCAACTCAACATGGTTGACCCTGATGAGAAAGACTCCACTGGCAACCTACCCTCAAGGGCTCTTCATATTGTTGGCCCAGATTTGAAGATCAAGCTGAGTTTTCTGTACCCTGCCACTACTGGGAGGAACATGGATGAAGTGCTGAGGGTGATAGAGTCATTGCAGAAGGCCTCAAAGTTCAAGGTTGCTACCCCAGCAAACTGGAAGCCAGGGGACCCTGTTGTCATTACCCCTGATGTCACCAATGAGCAAGCCAAGGAAATGTTCCCTCAAGGGTTCGAGAGTGTGAAACTCCCATCAAAGAAGGAATATTTGCGCTTAACTAAAGTTTGA
Predicted protein sequences of Glyma.08g088000
>Glyma.08g088000.2.p sequence-type=predicted peptide transcript=Glyma.08g088000.2 locus=Glyma.08g088000 id=Glyma.08g088000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAQYAKEFYQRGVKLLGLSCDDVQSHNEWIKDIEAYTPGAKVNYPIIADPKREIIKQLNMVDPDEKDSTGNLPSRALHIVGPDLKIKLSFLYPATTGRNMDEVLRVIESLQKASKFKVATPANWKPGDPVVITPDVTNEQAKEMFPQGFESVKLPSKKEYLRLTKV*

>Glyma.08g088000.3.p sequence-type=predicted peptide transcript=Glyma.08g088000.3 locus=Glyma.08g088000 id=Glyma.08g088000.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPRSLHASNSPLFIISLAHVLINDTSNFSASKMPGLTIGDTIPDLQVETNQGKIKLHQFCADGWTILFSHPGDFTPVCTTELGKMAQYAKEFYQRGVKLLGLSCDDVQSHNEWIKDIEAYTPGAKVNYPIIADPKREIIKQLNMVDPDEKDSTGNLPSRALHIVGPDLKIKLSFLYPATTGRNMDEVLRVIESLQKASKFKVATPANWKPGDPVVITPDVTNEQAKEMFPQGFESVKLPSKKEYLRLTKV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo