SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g087500

Feature Type:gene_model
Chromosome:Gm08
Start:6625531
stop:6630699
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g087500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G44050.1AT COS1 JGI N/AIEA
2.5.1.78EC 6,7-dimethyl-8-ribityllumazine synthase JGI N/AIEA
GO:0009231GO-bp riboflavin biosynthetic process JGI N/AIEA
GO:0009349GO-cc riboflavin synthase complex JGI N/AIEA
K00794KEGG Riboflavin metabolism JGI N/AIEA
KOG3243 KOG 6,7-dimethyl-8-ribityllumazine synthase JGI N/AIEA
PTHR21058PantherFam 6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE DMRL SYNTHASE LUMAZINE SYNTHASE JGI N/AIEA
PF00885Pfam 6,7-dimethyl-8-ribityllumazine synthase JGI N/AIEA

Gene model name correspondences to Glyma.08g087500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g09260 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g087500
>Glyma.08g087500.1 sequence-type=CDS polypeptide=Glyma.08g087500.1.p locus=Glyma.08g087500 id=Glyma.08g087500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCATTTGTTTCTACCCACTGTATCCTTCCTAGCGGGGTTGGATTTGTGCATGACCAAGATCGTTCTTGTGGTAGAACTAACACTTTGCATCTTCAAAATGCTCCTAAAAGCCCTAGCTCTCTCTCCTTTTTGCTCTCCGTGCGAGCTTCAGAAAGTAGATCAGATGCCGTTGTTGTTCAGAGCAAGGGTCGATCGTCTTTTTCTCAAACAGCTGCTGTGAGGCATCTTACAGGTTCTGTTACCAGAGCCCATGGACTTCGTTTTGCTGTGGTTGTTGCTAGATTTAATGAAATTGTTACCAAACCGCTCTTGGAAGGTGCTTTGGGTACTTTCAATAATTATTCAGTTCAAGATGAGGATATCGATGTTGTGTGGGTACCTGGTAGTTTTGAAATTGGTGTTGTTGCAGAAAGGCTTGGAAAATCAGGCAAATATGATGCAATCGTATGCATAGGAGCTGTGGTACGAGGAGATACAACCCACTATGATGCAGTTGCTAATTCAGCAGCATCAGGAGTTCTTTCAGCCAGTCTAAACTCAGGTGTTCCATGCATATTTGGTGTCCTAACATGTGATGATATGGATCAGGCTCTAAATAGAGCTGGTGGAAAGTCTGGGAATAAGGGTGCTGAGGCTGCATTGACTGCTATTGAGATGGCATCTTTGTTCGAGCACCATCTGAAGTAG

>Glyma.08g087500.2 sequence-type=CDS polypeptide=Glyma.08g087500.2.p locus=Glyma.08g087500 id=Glyma.08g087500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCATTTGTTTCTACCCACTGTATCCTTCCTAGCGGGGTTGGATTTGTGCATGACCAAGATCGTTCTTGTGGTAGAACTAACACTTTGCATCTTCAAAATGCTCCTAAAAGCCCTAGCTCTCTCTCCTTTTTGCTCTCCGTGCGAGAAAGTAGATCAGATGCCGTTGTTGTTCAGAGCAAGGGTCGATCGTCTTTTTCTCAAACAGCTGCTGTGAGGCATCTTACAGGTTCTGTTACCAGAGCCCATGGACTTCGTTTTGCTGTGGTTGTTGCTAGATTTAATGAAATTGTTACCAAACCGCTCTTGGAAGGTGCTTTGGGTACTTTCAATAATTATTCAGTTCAAGATGAGGATATCGATGTTGTGTGGGTACCTGGTAGTTTTGAAATTGGTGTTGTTGCAGAAAGGCTTGGAAAATCAGGCAAATATGATGCAATCGTATGCATAGGAGCTGTGGTACGAGGAGATACAACCCACTATGATGCAGTTGCTAATTCAGCAGCATCAGGAGTTCTTTCAGCCAGTCTAAACTCAGGTGTTCCATGCATATTTGGTGTCCTAACATGTGATGATATGGATCAGGCTCTAAATAGAGCTGGTGGAAAGTCTGGGAATAAGGGTGCTGAGGCTGCATTGACTGCTATTGAGATGGCATCTTTGTTCGAGCACCATCTGAAGTAG
Predicted protein sequences of Glyma.08g087500
>Glyma.08g087500.1.p sequence-type=predicted peptide transcript=Glyma.08g087500.1 locus=Glyma.08g087500 id=Glyma.08g087500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASFVSTHCILPSGVGFVHDQDRSCGRTNTLHLQNAPKSPSSLSFLLSVRASESRSDAVVVQSKGRSSFSQTAAVRHLTGSVTRAHGLRFAVVVARFNEIVTKPLLEGALGTFNNYSVQDEDIDVVWVPGSFEIGVVAERLGKSGKYDAIVCIGAVVRGDTTHYDAVANSAASGVLSASLNSGVPCIFGVLTCDDMDQALNRAGGKSGNKGAEAALTAIEMASLFEHHLK*

>Glyma.08g087500.2.p sequence-type=predicted peptide transcript=Glyma.08g087500.2 locus=Glyma.08g087500 id=Glyma.08g087500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASFVSTHCILPSGVGFVHDQDRSCGRTNTLHLQNAPKSPSSLSFLLSVRESRSDAVVVQSKGRSSFSQTAAVRHLTGSVTRAHGLRFAVVVARFNEIVTKPLLEGALGTFNNYSVQDEDIDVVWVPGSFEIGVVAERLGKSGKYDAIVCIGAVVRGDTTHYDAVANSAASGVLSASLNSGVPCIFGVLTCDDMDQALNRAGGKSGNKGAEAALTAIEMASLFEHHLK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo