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Report for Sequence Feature Glyma.08g086700

Feature Type:gene_model
Chromosome:Gm08
Start:6555198
stop:6564724
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.08g086700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G31070.2AT N-acetylglucosamine-1-phosphate uridylyltransferase 1 JGI N/AIEA
GO:0006048GO-bp UDP-N-acetylglucosamine biosynthetic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0005829GO-cc cytosol EnsemblGenomesN/AIEA
GO:0003977GO-mf UDP-N-acetylglucosamine diphosphorylase activity EnsemblGenomesN/AIEA
GO:0016779GO-mf nucleotidyltransferase activity JGI N/AIEA
GO:0070569GO-mf uridylyltransferase activity EnsemblGenomesN/AIEA
KOG2388 KOG UDP-N-acetylglucosamine pyrophosphorylase JGI N/AIEA
PTHR11952Panther UDP- GLUCOSE PYROPHOSPHORYLASE JGI N/AIEA
PTHR11952:SF2Panther LD24639P JGI N/AIEA
PF01704PFAM UTP--glucose-1-phosphate uridylyltransferase JGI N/AIEA
UDPNACETYLGALSYN-PWYSoyCyc9 UDP-N-acetyl-D-glucosamine biosynthesis II Plant Metabolic Network ISS
GN7V-67476SoyCyc9-rxn UDP-N-acetylgalactosamine diphosphorylase Plant Metabolic Network ISS

Expression Patterns of Glyma.08g086700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.08g086700 not represented in the dataset
Glyma.08g086700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.08g086700
ParalogEvidenceComments
Glyma.05g132100 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.08g086700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g09170 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.08g086700
>Glyma.08g086700.2 sequence-type=transcript locus=Glyma.08g086700 ID=Glyma.08g086700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AATCCAGATGTGAAAGAGGGAGGGGGTATTTAGATCTGAAATCAAAATCGAAATCGAAACCGAagagagagaaaacgtgaaaccgagagagagagagagagagatgagggaACCATCGTCGGTGGGATTCGAAGGCAACGGCGTCGTTTCTTCGCCGCCGCAAGCTCTCATCGAGAGACTGAAAGACTACGGCCAAGAAGACGTTTTCGCCCTCTGGTACGAGCTCTCCCCCGAGGAACGCGAGTTTCTCGTCAAGGACATTGAGAGTTTAGATCTTTCGAGAATTGACCGGATTATTCGATGCTCGCTGCGATCTCAAGGACTGCCGGCGGCGGCCATTGAGCCGGTGCCGGAGAGCAATGTGTCGACGGTGGAGGAGAGAAGCCAGGAGGATCGAGAGAGATGGTTGAAAATGGGATTGAAAGCTATTTCAGATGGCAAATTAGCCGTGTTGCTTTTATCTGGTGGCCAGGGGACTCGACTTGGAAGTTCAGATCCAAAAGGATGTTTCAatattGGACTTCCATCTGGAAAATCACTTTTTCAACTTCAAGCTGAGAGGATTTTGTGTGCACAGAGACTAGCTGCTCAAGCTACAAATGAGAATTCTTCTTCTTCAGTGCAAATACACTGGTACATCATGACTAGTCCATTCACTGATGAGGCAACACGCAAATTCTTTGAAAGTCATAAATTTTTTGGTCTTGAGGCAGAACAGGTTACCTTTTTCCAGCAAGGAACAATCCCTTGTGTTTCCAAGGATGGCAGATTTATTATGGAGACTCCATACAGGGTAGCAAAGGCTCCTGATGGGAATGGTGGAGTGTATTCAGCTCTGAAATCTACCAAATTATTGGAGGATATGGCCTCAAAAGGAATTAAGTATATTGATTGCTATGGAGTTGACAATGCACTGGTTCGAGTTGCTGATCCAACTTTTTTAGGTTACTTCATTGATAAAGGTGTTGCTGCTGCTGCAAAAGTTGTCCGTAAGGCGTATCCACAAGAAAAGGTTGGTGTGTTTGTAAGACGAGGTAAAGGTGGTCCTCTTACTGTAGTTGAATACAGTGAGTTGGACCAGTCACTAGCTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAATGTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCATTTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGGATTAAAACTTGAACAGTTTATATTTGATGCATTTCCATATGCTCCTACGACTGCACTTTTTGAGGTGTTACGGGAGGAGGAATTTGCACCAGTGAAAAATGCAAATGGATCCAATGTTGACACTCCAGACAGTGCGAAACTACTTGTTCTTCGACTCCATACTCGTTGGGTAGTTGCTGCAGGTGGCTTCTTAACACATTCAGTGCCCTTATATGCAACAGGTGTTGAAGTGTCACCACTCTGTTCGTATGCTGGTGAAAACCTGGAACCAATATGTCGAGGAAGAACATTTCATGCACCTTGTGAGATCTCGTTCTAGTTCCACCCTGTTTGTGCGGCTTTTTTGTGACTTACACTACAATGAGGGAGTTCTCAGTCCCATACATGTTGCAAGATTACTTTGCGTATGCCACTCATCATTCACAGTTATCAATGTATATTATCTTCTCCAATCTGTTTCTGATTGGTTTTTGGTTTTTTCTTTTTTGGCCACTGATCTGTTTTAGTGTGCTGAGGAATGTACATGTATCATAATTTTACTGAGCATTTATTTGCCCATGCAGACTCCAATATATCGCCCCATTTTCCTTTTTCCTTAACTATTTACCAAATTAATTCGTGCCATAGTCCATAATTTTTTTTATTGTAATTTCACCCTTTATTTGAGGTAGTTGGGGGAATAGAGGTGATGAGG
Coding sequences of Glyma.08g086700
>Glyma.08g086700.1 sequence-type=CDS polypeptide=Glyma.08g086700.1.p locus=Glyma.08g086700 ID=Glyma.08g086700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGGGAACCATCGTCGGTGGGATTCGAAGGCAACGGCGTCGTTTCTTCGCCGCCGCAAGCTCTCATCGAGAGACTGAAAGACTACGGCCAAGAAGACGTTTTCGCCCTCTGGTACGAGCTCTCCCCCGAGGAACGCGAGTTTCTCGTCAAGGACATTGAGAGTTTAGATCTTTCGAGAATTGACCGGATTATTCGATGCTCGCTGCGATCTCAAGGACTGCCGGCGGCGGCCATTGAGCCGGTGCCGGAGAGCAATGTGTCGACGGTGGAGGAGAGAAGCCAGGAGGATCGAGAGAGATGGTTGAAAATGGGATTGAAAGCTATTTCAGATGGCAAATTAGCCGTGTTGCTTTTATCTGGTGGCCAGGGGACTCGACTTGGAAGTTCAGATCCAAAAGGATGTTTCAATATTGGACTTCCATCTGGAAAATCACTTTTTCAACTTCAAGCTGAGAGGATTTTGTGTGCACAGAGACTAGCTGCTCAAGCTACAAATGAGAATTCTTCTTCTTCAGTGCAAATACACTGGTACATCATGACTAGTCCATTCACTGATGAGGCAACACGCAAATTCTTTGAAAGTCATAAATTTTTTGGTCTTGAGGCAGAACAGGTTACCTTTTTCCAGCAAGGAACAATCCCTTGTGTTTCCAAGGATGGCAGATTTATTATGGAGACTCCATACAGGGTAGCAAAGGCTCCTGATGGGAATGGTGGAGTGTATTCAGCTCTGAAATCTACCAAATTATTGGAGGATATGGCCTCAAAAGGAATTAAGTATATTGATTGCTATGGAGTTGACAATGCACTGGTTCGAGTTGCTGATCCAACTTTTTTAGGTTACTTCATTGATAAAGGTGTTGCTGCTGCTGCAAAAGTTGTCCGTAAGGCGTATCCACAAGAAAAGGTTGGTGTGTTTGTAAGACGAGGTAAAGGTGGTCCTCTTACTGTAGTTGAATACAGTGAGTTGGACCAGTCACTAGCTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAATGTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCATTTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGGATTAAAACTTGAACAGTTTATATTTGATGCATTTCCATATGCTCCTACGACTGCACTTTTTGAGGTGTTACGGGAGGAGGAATTTGCACCAGTGAAAAATGCAAATGGATCCAATGTTGACACTCCAGACAGTGCGAAACTACTTGTTCTTCGACTCCATACTCGTTGGGTAGTTGCTGCAGGTGGCTTCTTAACACATTCAGTGCCCTTATATGCAACAGGTGTTGAAGTGTCACCACTCTGTTCGTATGCTGGTGAAAACCTGGAACCAATATGTCGAGGAAGAACATTTCATGCACCTTGTGAGATCTCGTTCTAG

>Glyma.08g086700.2 sequence-type=CDS polypeptide=Glyma.08g086700.2.p locus=Glyma.08g086700 ID=Glyma.08g086700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGGGAACCATCGTCGGTGGGATTCGAAGGCAACGGCGTCGTTTCTTCGCCGCCGCAAGCTCTCATCGAGAGACTGAAAGACTACGGCCAAGAAGACGTTTTCGCCCTCTGGTACGAGCTCTCCCCCGAGGAACGCGAGTTTCTCGTCAAGGACATTGAGAGTTTAGATCTTTCGAGAATTGACCGGATTATTCGATGCTCGCTGCGATCTCAAGGACTGCCGGCGGCGGCCATTGAGCCGGTGCCGGAGAGCAATGTGTCGACGGTGGAGGAGAGAAGCCAGGAGGATCGAGAGAGATGGTTGAAAATGGGATTGAAAGCTATTTCAGATGGCAAATTAGCCGTGTTGCTTTTATCTGGTGGCCAGGGGACTCGACTTGGAAGTTCAGATCCAAAAGGATGTTTCAATATTGGACTTCCATCTGGAAAATCACTTTTTCAACTTCAAGCTGAGAGGATTTTGTGTGCACAGAGACTAGCTGCTCAAGCTACAAATGAGAATTCTTCTTCTTCAGTGCAAATACACTGGTACATCATGACTAGTCCATTCACTGATGAGGCAACACGCAAATTCTTTGAAAGTCATAAATTTTTTGGTCTTGAGGCAGAACAGGTTACCTTTTTCCAGCAAGGAACAATCCCTTGTGTTTCCAAGGATGGCAGATTTATTATGGAGACTCCATACAGGGTAGCAAAGGCTCCTGATGGGAATGGTGGAGTGTATTCAGCTCTGAAATCTACCAAATTATTGGAGGATATGGCCTCAAAAGGAATTAAGTATATTGATTGCTATGGAGTTGACAATGCACTGGTTCGAGTTGCTGATCCAACTTTTTTAGGTTACTTCATTGATAAAGGTGTTGCTGCTGCTGCAAAAGTTGTCCGTAAGGCGTATCCACAAGAAAAGGTTGGTGTGTTTGTAAGACGAGGTAAAGGTGGTCCTCTTACTGTAGTTGAATACAGTGAGTTGGACCAGTCACTAGCTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAATGTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCATTTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGGATTAAAACTTGAACAGTTTATATTTGATGCATTTCCATATGCTCCTACGACTGCACTTTTTGAGGTGTTACGGGAGGAGGAATTTGCACCAGTGAAAAATGCAAATGGATCCAATGTTGACACTCCAGACAGTGCGAAACTACTTGTTCTTCGACTCCATACTCGTTGGGTAGTTGCTGCAGGTGGCTTCTTAACACATTCAGTGCCCTTATATGCAACAGGTGTTGAAGTGTCACCACTCTGTTCGTATGCTGGTGAAAACCTGGAACCAATATGTCGAGGAAGAACATTTCATGCACCTTGTGAGATCTCGTTCTAG
Predicted protein sequences of Glyma.08g086700
>Glyma.08g086700.1.p sequence-type=predicted peptide transcript=Glyma.08g086700.1 locus=Glyma.08g086700 ID=Glyma.08g086700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MREPSSVGFEGNGVVSSPPQALIERLKDYGQEDVFALWYELSPEEREFLVKDIESLDLSRIDRIIRCSLRSQGLPAAAIEPVPESNVSTVEERSQEDRERWLKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERILCAQRLAAQATNENSSSSVQIHWYIMTSPFTDEATRKFFESHKFFGLEAEQVTFFQQGTIPCVSKDGRFIMETPYRVAKAPDGNGGVYSALKSTKLLEDMASKGIKYIDCYGVDNALVRVADPTFLGYFIDKGVAAAAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDQSLASAVNQATGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSIYHLAEKKIPSIHGYTMGLKLEQFIFDAFPYAPTTALFEVLREEEFAPVKNANGSNVDTPDSAKLLVLRLHTRWVVAAGGFLTHSVPLYATGVEVSPLCSYAGENLEPICRGRTFHAPCEISF*

>Glyma.08g086700.2.p sequence-type=predicted peptide transcript=Glyma.08g086700.2 locus=Glyma.08g086700 ID=Glyma.08g086700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MREPSSVGFEGNGVVSSPPQALIERLKDYGQEDVFALWYELSPEEREFLVKDIESLDLSRIDRIIRCSLRSQGLPAAAIEPVPESNVSTVEERSQEDRERWLKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERILCAQRLAAQATNENSSSSVQIHWYIMTSPFTDEATRKFFESHKFFGLEAEQVTFFQQGTIPCVSKDGRFIMETPYRVAKAPDGNGGVYSALKSTKLLEDMASKGIKYIDCYGVDNALVRVADPTFLGYFIDKGVAAAAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDQSLASAVNQATGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSIYHLAEKKIPSIHGYTMGLKLEQFIFDAFPYAPTTALFEVLREEEFAPVKNANGSNVDTPDSAKLLVLRLHTRWVVAAGGFLTHSVPLYATGVEVSPLCSYAGENLEPICRGRTFHAPCEISF*






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