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Report for Sequence Feature Glyma.08g085100

Feature Type:gene_model
Chromosome:Gm08
Start:6407624
stop:6412069
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g085100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G59180.1AT NRPB7 JGI N/AIEA
2.7.7.6EC DNA-directed RNA polymerase JGI N/AIEA
GO:0006351GO-bp transcription, DNA-templated JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0003899GO-mf DNA-directed 5'-3' RNA polymerase activity JGI N/AIEA
K03015KEGG DNA repair and recombination proteins JGI N/AIEA
KOG3298 KOG DNA-directed RNA polymerase subunit E' JGI N/AIEA
PTHR12709PantherFam DNA-DIRECTED RNA POLYMERASE II, III JGI N/AIEA
PF00575Pfam S1 RNA binding domain JGI N/AIEA
PF03876Pfam SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 JGI N/AIEA

Proteins Associated with Glyma.08g085100
LocusGene SymbolProtein Name
RNA polymerase II DNA-directed RNA polymerase II subunit RPB7

Gene model name correspondences to Glyma.08g085100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g09000 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g085100
>Glyma.08g085100.3 sequence-type=CDS polypeptide=Glyma.08g085100.3.p locus=Glyma.08g085100 id=Glyma.08g085100.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTTTTCCACATAGTACTGGAGCGAAATATGCAGCTTCATCCACGCTACTTTGGTCGTAACCTTCGCGATAATCTCGTTTCCAAGCTTATGAAAGACGTGGAAGGCACTTGCAGTGGCCGACATGGATTTGTGGTGGCAGTTACAGGGATAGAGAACATAGGGAAAGGGCTAATTCGTGATGGAACAGGGTTTGTGACATTTCCAGTTAAGTACCAATGTGTTGTCTTCAGACCGTTTAAGGGAGAGATCTTGGAAGCAGTTGTTACTATGGTGAACAAGATGGGATTTTTTGCTGAAGCTGGACCTGTCCAAATCTTTGTTTCAAACCATTTGATTCCGGATGATATGGAGTTCCAGTCTGGAGACATGCCAAATTACACTACATCAGATGGATCAGTTAAGATTCAAAAAGATAGTGAAGTGAGACTAAAGATAATTGGGACTCGAGTGGATGCTACAGAAATTTTCTGCATAGGTACCATAAAAGATGATTTCTTGGGTGTGATCAACGACCCTGCAACAGTTTAA
Predicted protein sequences of Glyma.08g085100
>Glyma.08g085100.3.p sequence-type=predicted peptide transcript=Glyma.08g085100.3 locus=Glyma.08g085100 id=Glyma.08g085100.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATV*






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