SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g060200

Feature Type:gene_model
Chromosome:Gm08
Start:4633242
stop:4639583
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g060200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G21430.1AT B160 JGI N/AIEA
K15601KEGG Chromosome and associated proteins JGI N/AIEA
KOG1356 KOG Putative transcription factor 5qNCA, contains JmjC domain JGI N/AIEA
PTHR12549PantherFam JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN JGI N/AIEA
PF02373Pfam JmjC domain, hydroxylase JGI N/AIEA
PF08879Pfam WRC JGI N/AIEA

Gene model name correspondences to Glyma.08g060200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g06460 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g060200
>Glyma.08g060200.1 sequence-type=CDS polypeptide=Glyma.08g060200.1.p locus=Glyma.08g060200 id=Glyma.08g060200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGAAAACTCCGAAGGAGAAGGAAACGGAGGAGCCTCTGCCAGACCACCTCCGCTGCGGGCGCACGGACGGGCGGCAATGGCGTTGCCGGCGGCGAGTGAAGGAGAATCTGAAGCTCTGCGAGATTCACTACCTCCAAGGTCGCCACCGCCAGTACAAGGAGAAGGTTCCCGAGTCGCTGAAGCTTCAGCGCAAGCGCAAATCTAACAACAACAACAACAACAACAACGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGAAACCAGAGCCTGATAAGAAGAATGTTCTCGACGACAATGTCGAATCTAGGGCACGGAGAACCTCGAGAATCGTGAAGAAGAAGCGCATGCTTTCTGAGGATTCCGATGCTTCAGCTTCTTCTCCTCCGGCGAGGAAGAAGGCGCTGAAGCAGGGCGATATGCAGTTGGAGCTCTTGAGGATGGTGCTGAAGAGAGAGGCTGAGAAGAACAAAAACAAGAGCAAGAGCAAGAACAAGAAGAACAATAACAAAAAGAAGAATAAGAAGAAGGAAAAGAGGAGGAAGGAGGAAAAAGAGGAATTGTGTTACACTAAAGAAGAGTTGAGAAGAGAATTGCCAAATGGAGTAATGGAAATCTCTCCGGCTTCACCGACGCGTGATTACAACAATGTAGGTTCGCATTGTGATGTCAAAGTTGGTGTTGATAGTAAAACTGTTACTCCGCGTTACTTTAGGTCCAAGAATGTTGATAGAGTCCCCGCGGGGAAGTTGCAGATTGTGCCGTATGGATCAAACTTGAAAAAGGGTAAGAGGAAGAAGTGTCATTGGTGCCAGAGAAGTGAGTCTGGGAATCTCATTCAATGTTCGAGCTGTCAGAGGGAGTTCTTCTGCATGGATTGCGTTAAAGAGCGGTATTTTGACGCTGAAAATGAAATTAAGAAGGCATGTCCAGTTTGTCGTGGAACTTGCCCTTGTAAGTATTGCTCTGCAAGTCAATGTAAAGACAGTGAAAGTAAGGAATGTTTGACTGGTAAGAGCAGAGTTGATAGAATATTGCATTTTCATTATTTGATCTGCATGCTCCTTCCAGTACTAAAGCAAATAAGTGAAGATCAGAATATTGAGCTAGAAACAGAAGTAAAAATTAAAGGGAAAAATATTTCTGATATTCAAATCAAGCAGGTTGAATTTGGATGCAGTGAGAAAAACTATTGCAATCACTGCAAAACACCCATTTTGGATCTCCATAGAAGCTGTCCTAGTTGTTCATATAGCCTATGCTCAAGTTGTTGTCAGGAATTAAGTCAAGGAAAAGCTTCTGGAGCAATGAACTCATCCGTGTTCAAGCGACCTGATAAAATGAAACCTTGCAGTGCTAGTGAGAACCATACTTTGGAGGAGAGAGCCACATCTATTGGCAATTTAACTGATACTTCAGTATTGCCTGAGTGGACAAATGGTAATGGCATTGATAGTCTATCATGCCCTCCTACAGAGCTTGGTGGTTGTGGTAAAAGCCACCTTGAGTTGAGATCTGTTTTCCCTTCCAGTTGGATCAAAGAGATGGAAGCGAAGGCAGAAGAAATTGTTTGCAGCTATGACTTTCCTGAAACTTCAGATAAAAGTTCAAGTTGCTCATTGTGTTTTGACACTGATCATGGTACTAACAGATATAAGCAGTTGCAAGAAGCAGCTCTAAGAGAAGATTCCAATGATAATTACTTGTTTTGTCCCACAGTGATGGACATCAGTGGTGATAACTTTGAGCACTTTCAGAAACACTGGGGAAAAGGCCATCCTATAGTTGTCCAAGATGCGCTCCGAAGTACCTCAAACCTCAGTTGGGATCCACTGACCATGTTCTGTACTTATCTTGAGCAGAGCATTACAAGATATGAGAACAATAAAAACTTGCTTGAATCCTGTTTGGATTGGTGGGAGGTGGAAATTAACATTAAGCAGTACTTTACTGGGTCTGTCAAGCGTCGTCCTCAGAGAAACACTTGGGATGAGATGCTGAAACTAAAAGGGTGGCTTTCTTCCCAAATATTTAAAGAGCAGTTTCCAGCTCATTTTGCTGAGGTAATTGATGCTCTACCAGTTCAAGAATACATGCATCCCCTCTGCGGTCTTCTGAATTTAGCTGCAAATTTGCCACATGGGAGTGCAAAACATGACATTGGGCCATATGTCTACATTTCTTATGGCTCTGCTGACAAAGAAACTGATTCAGTGACAAAGCTCTGCTATGACTCATATGATGTGGTTAATATTATGACACATACCACAGATGCCCCCCTCTCTACAGAACAACTTACAAAAATAAGAAAACTGCTAAAAAAGCACAAAACTCTGTGTCAAATGGAGACTATTGCTACTGAGGAGCCACGGGAACAGAAATTGAATGGAATGGCATTATTGCATGGTCCAGAAACAGAGCGAAAAGGCTCATGGAGTATGGTCGAAGAAGGAATGAACTTTTTCAGGAGAGTCAATAGAACATCTTGCATCTCAACTGAAGCTAAAAAAGTTTCTAGTCAGAGCATGGACAGCAATGGAGAATGTGATTTCATTTCTGATTCTGATTCTGGATCCACTTTACTTCTCCTTGGGACTGTTCAAACTGCTGAATTGTCAAAGCACAATAATCCTAGAAATCCCTTTGAAAGCTCAAAAAGACATAAAAAAAAGTTTACTGAGCATTTGGGTGCCCAGTGGGATGTCTTTCGCAGACAAGATGTTCCAAAGCTCATCGAATACCTTAAAAGACATTATGCTGAATTTTCTTATACCCATGACTATGACAAGAAGATGGTTCATCCAATTCTAGATCAGAGCATTTTTCTTGACAGTACTCACAAAAAGAGACTAAAGGAGGAATTTAAGATTGAACCATGGACTTTTCAGCAACATGTTGGACAAGCTGTCATCATTCCTGCTGGATGTCCATACCAGATGAGGAATTCTAAGTCTAGCGTTCATGCGGTATTGGAATTTGTGTCCCCTGAAAATGTTACTGAGGGTATCCAGTTGATTGATGAGGTCCGACTATTGCCTGAAGACCATAAAGCAAAAGCAGACCTGCTGGAGGTAAAGAAAATGGCGCTTCATAGCATGAATACAGCAATTAAAGAAGTACGTCAGCTTACAAGCAAAACATGA

>Glyma.08g060200.3 sequence-type=CDS polypeptide=Glyma.08g060200.3.p locus=Glyma.08g060200 id=Glyma.08g060200.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGAAAACTCCGAAGGAGAAGGAAACGGAGGAGCCTCTGCCAGACCACCTCCGCTGCGGGCGCACGGACGGGCGGCAATGGCGTTGCCGGCGGCGAGTGAAGGAGAATCTGAAGCTCTGCGAGATTCACTACCTCCAAGGTCGCCACCGCCAGTACAAGGAGAAGGTTCCCGAGTCGCTGAAGCTTCAGCGCAAGCGCAAATCTAACAACAACAACAACAACAACAACGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGAAACCAGAGCCTGATAAGAAGAATGTTCTCGACGACAATGTCGAATCTAGGGCACGGAGAACCTCGAGAATCGTGAAGAAGAAGCGCATGCTTTCTGAGGATTCCGATGCTTCAGCTTCTTCTCCTCCGGCGAGGAAGAAGGCGCTGAAGCAGGGCGATATGCAGTTGGAGCTCTTGAGGATGGTGCTGAAGAGAGAGGCTGAGAAGAACAAAAACAAGAGCAAGAGCAAGAACAAGAAGAACAATAACAAAAAGAAGAATAAGAAGAAGGAAAAGAGGAGGAAGGAGGAAAAAGAGGAATTGTGTTACACTAAAGAAGAGTTGAGAAGAGAATTGCCAAATGGAGTAATGGAAATCTCTCCGGCTTCACCGACGCGTGATTACAACAATGTAGGTTCGCATTGTGATGTCAAAGTTGGTGTTGATAGTAAAACTGTTACTCCGCGTTACTTTAGGTCCAAGAATGTTGATAGAGTCCCCGCGGGGAAGTTGCAGATTGTGCCGTATGGATCAAACTTGAAAAAGGGTAAGAGGAAGAAGTGTCATTGGTGCCAGAGAAGTGAGTCTGGGAATCTCATTCAATGTTCGAGCTGTCAGAGGGAGTTCTTCTGCATGGATTGCGTTAAAGAGCGGTATTTTGACGCTGAAAATGAAATTAAGAAGGCATGTCCAGTTTGTCGTGGAACTTGCCCTTGTAAGTATTGCTCTGCAAGTCAATGTAAAGACAGTGAAAGTAAGGAATGTTTGACTGGTAAGAGCAGAGTTGATAGAATATTGCATTTTCATTATTTGATCTGCATGCTCCTTCCAGTACTAAAGCAAATAAGTGAAGATCAGAATATTGAGCTAGAAACAGAAGTAAAAATTAAAGGGAAAAATATTTCTGATATTCAAATCAAGCAGGTTGAATTTGGATGCAGTGAGAAAAACTATTGCAATCACTGCAAAACACCCATTTTGGATCTCCATAGAAGCTGTCCTAGTTGTTCATATAGCCTATGCTCAAGTTGTTGTCAGGAATTAAGTCAAGGAAAAGCTTCTGGAGCAATGAACTCATCCGTGTTCAAGCGACCTGATAAAATGAAACCTTGCAGTGCTAGTGAGAACCATACTTTGGAGGAGAGAGCCACATCTATTGGCAATTTAACTGATACTTCAGTATTGCCTGAGTGGACAAATGGTAATGGCATTGATAGTCTATCATGCCCTCCTACAGAGCTTGGTGGTTGTGGTAAAAGCCACCTTGAGTTGAGATCTGTTTTCCCTTCCAGTTGGATCAAAGAGATGGAAGCGAAGGCAGAAGAAATTGTTTGCAGCTATGACTTTCCTGAAACTTCAGATAAAAGTTCAAGTTGCTCATTGTGTTTTGACACTGATCATGTGATGGACATCAGTGGTGATAACTTTGAGCACTTTCAGAAACACTGGGGAAAAGGCCATCCTATAGTTGTCCAAGATGCGCTCCGAAGTACCTCAAACCTCAGTTGGGATCCACTGACCATGTTCTGTACTTATCTTGAGCAGAGCATTACAAGATATGAGAACAATAAAAACTTGCTTGAATCCTGTTTGGATTGGTGGGAGGTGGAAATTAACATTAAGCAGTACTTTACTGGGTCTGTCAAGCGTCGTCCTCAGAGAAACACTTGGGATGAGATGCTGAAACTAAAAGGGTGGCTTTCTTCCCAAATATTTAAAGAGCAGTTTCCAGCTCATTTTGCTGAGGTAATTGATGCTCTACCAGTTCAAGAATACATGCATCCCCTCTGCGGTCTTCTGAATTTAGCTGCAAATTTGCCACATGGGAGTGCAAAACATGACATTGGGCCATATGTCTACATTTCTTATGGCTCTGCTGACAAAGAAACTGATTCAGTGACAAAGCTCTGCTATGACTCATATGATGTGGTTAATATTATGACACATACCACAGATGCCCCCCTCTCTACAGAACAACTTACAAAAATAAGAAAACTGCTAAAAAAGCACAAAACTCTGTGTCAAATGGAGACTATTGCTACTGAGGAGCCACGGGAACAGAAATTGAATGGAATGGCATTATTGCATGGTCCAGAAACAGAGCGAAAAGGCTCATGGAGTATGGTCGAAGAAGGAATGAACTTTTTCAGGAGAGTCAATAGAACATCTTGCATCTCAACTGAAGCTAAAAAAGTTTCTAGTCAGAGCATGGACAGCAATGGAGAATGTGATTTCATTTCTGATTCTGATTCTGGATCCACTTTACTTCTCCTTGGGACTGTTCAAACTGCTGAATTGTCAAAGCACAATAATCCTAGAAATCCCTTTGAAAGCTCAAAAAGACATAAAAAAAAGTTTACTGAGCATTTGGGTGCCCAGTGGGATGTCTTTCGCAGACAAGATGTTCCAAAGCTCATCGAATACCTTAAAAGACATTATGCTGAATTTTCTTATACCCATGACTATGACAAGAAGATGGTTCATCCAATTCTAGATCAGAGCATTTTTCTTGACAGTACTCACAAAAAGAGACTAAAGGAGGAATTTAAGATTGAACCATGGACTTTTCAGCAACATGTTGGACAAGCTGTCATCATTCCTGCTGGATGTCCATACCAGATGAGGAATTCTAAGTCTAGCGTTCATGCGGTATTGGAATTTGTGTCCCCTGAAAATGTTACTGAGGGTATCCAGTTGATTGATGAGGTCCGACTATTGCCTGAAGACCATAAAGCAAAAGCAGACCTGCTGGAGGTAAAGAAAATGGCGCTTCATAGCATGAATACAGCAATTAAAGAAGTACGTCAGCTTACAAGCAAAACATGA
Predicted protein sequences of Glyma.08g060200
>Glyma.08g060200.1.p sequence-type=predicted peptide transcript=Glyma.08g060200.1 locus=Glyma.08g060200 id=Glyma.08g060200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSKTPKEKETEEPLPDHLRCGRTDGRQWRCRRRVKENLKLCEIHYLQGRHRQYKEKVPESLKLQRKRKSNNNNNNNNEEEEEEEEEEKPEPDKKNVLDDNVESRARRTSRIVKKKRMLSEDSDASASSPPARKKALKQGDMQLELLRMVLKREAEKNKNKSKSKNKKNNNKKKNKKKEKRRKEEKEELCYTKEELRRELPNGVMEISPASPTRDYNNVGSHCDVKVGVDSKTVTPRYFRSKNVDRVPAGKLQIVPYGSNLKKGKRKKCHWCQRSESGNLIQCSSCQREFFCMDCVKERYFDAENEIKKACPVCRGTCPCKYCSASQCKDSESKECLTGKSRVDRILHFHYLICMLLPVLKQISEDQNIELETEVKIKGKNISDIQIKQVEFGCSEKNYCNHCKTPILDLHRSCPSCSYSLCSSCCQELSQGKASGAMNSSVFKRPDKMKPCSASENHTLEERATSIGNLTDTSVLPEWTNGNGIDSLSCPPTELGGCGKSHLELRSVFPSSWIKEMEAKAEEIVCSYDFPETSDKSSSCSLCFDTDHGTNRYKQLQEAALREDSNDNYLFCPTVMDISGDNFEHFQKHWGKGHPIVVQDALRSTSNLSWDPLTMFCTYLEQSITRYENNKNLLESCLDWWEVEINIKQYFTGSVKRRPQRNTWDEMLKLKGWLSSQIFKEQFPAHFAEVIDALPVQEYMHPLCGLLNLAANLPHGSAKHDIGPYVYISYGSADKETDSVTKLCYDSYDVVNIMTHTTDAPLSTEQLTKIRKLLKKHKTLCQMETIATEEPREQKLNGMALLHGPETERKGSWSMVEEGMNFFRRVNRTSCISTEAKKVSSQSMDSNGECDFISDSDSGSTLLLLGTVQTAELSKHNNPRNPFESSKRHKKKFTEHLGAQWDVFRRQDVPKLIEYLKRHYAEFSYTHDYDKKMVHPILDQSIFLDSTHKKRLKEEFKIEPWTFQQHVGQAVIIPAGCPYQMRNSKSSVHAVLEFVSPENVTEGIQLIDEVRLLPEDHKAKADLLEVKKMALHSMNTAIKEVRQLTSKT*

>Glyma.08g060200.3.p sequence-type=predicted peptide transcript=Glyma.08g060200.3 locus=Glyma.08g060200 id=Glyma.08g060200.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSKTPKEKETEEPLPDHLRCGRTDGRQWRCRRRVKENLKLCEIHYLQGRHRQYKEKVPESLKLQRKRKSNNNNNNNNEEEEEEEEEEKPEPDKKNVLDDNVESRARRTSRIVKKKRMLSEDSDASASSPPARKKALKQGDMQLELLRMVLKREAEKNKNKSKSKNKKNNNKKKNKKKEKRRKEEKEELCYTKEELRRELPNGVMEISPASPTRDYNNVGSHCDVKVGVDSKTVTPRYFRSKNVDRVPAGKLQIVPYGSNLKKGKRKKCHWCQRSESGNLIQCSSCQREFFCMDCVKERYFDAENEIKKACPVCRGTCPCKYCSASQCKDSESKECLTGKSRVDRILHFHYLICMLLPVLKQISEDQNIELETEVKIKGKNISDIQIKQVEFGCSEKNYCNHCKTPILDLHRSCPSCSYSLCSSCCQELSQGKASGAMNSSVFKRPDKMKPCSASENHTLEERATSIGNLTDTSVLPEWTNGNGIDSLSCPPTELGGCGKSHLELRSVFPSSWIKEMEAKAEEIVCSYDFPETSDKSSSCSLCFDTDHVMDISGDNFEHFQKHWGKGHPIVVQDALRSTSNLSWDPLTMFCTYLEQSITRYENNKNLLESCLDWWEVEINIKQYFTGSVKRRPQRNTWDEMLKLKGWLSSQIFKEQFPAHFAEVIDALPVQEYMHPLCGLLNLAANLPHGSAKHDIGPYVYISYGSADKETDSVTKLCYDSYDVVNIMTHTTDAPLSTEQLTKIRKLLKKHKTLCQMETIATEEPREQKLNGMALLHGPETERKGSWSMVEEGMNFFRRVNRTSCISTEAKKVSSQSMDSNGECDFISDSDSGSTLLLLGTVQTAELSKHNNPRNPFESSKRHKKKFTEHLGAQWDVFRRQDVPKLIEYLKRHYAEFSYTHDYDKKMVHPILDQSIFLDSTHKKRLKEEFKIEPWTFQQHVGQAVIIPAGCPYQMRNSKSSVHAVLEFVSPENVTEGIQLIDEVRLLPEDHKAKADLLEVKKMALHSMNTAIKEVRQLTSKT*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo