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Report for Sequence Feature Glyma.08g057700

Feature Type:gene_model
Chromosome:Gm08
Start:4430345
stop:4437832
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.08g057700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G17660.1AT ARF-GAP domain 15 JGI N/AIEA
GO:0043547GO-bp positive regulation of GTPase activity EnsemblGenomesN/AIEA
GO:0005096GO-mf GTPase activator activity EnsemblGenomesN/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
GO:0046872GO-mf metal ion binding EnsemblGenomesN/AIEA
KOG0703 KOG Predicted GTPase-activating protein JGI N/AIEA
PTHR23180Panther CENTAURIN/ARF JGI N/AIEA
PTHR23180:SF31Panther JGI N/AIEA
PF01412PFAM Putative GTPase activating protein for Arf JGI N/AIEA

Expression Patterns of Glyma.08g057700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.08g057700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g06230 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.08g057700
>Glyma.08g057700.2 sequence-type=transcript locus=Glyma.08g057700 ID=Glyma.08g057700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CCAAACTGAGACAGCAATGCTTTTGTTTGGGCTAATAAAACCGTTTTCTTTGTTTCTGCTTCTCAGTTGCTGAACCTAACCCACACACGCAACATTTTCCTTCCTTTCTTGTTTTGCTCTGCACTGTCACGTCAATATGAACGGGAAAGCCTCCATCTCCAAGGAGCTCAATGCCAAGCACGCCAAGATATTAGAAGGACTTCTTAAGCTGCCTGAGAACAGGGAATGCGCAGACTGCCGGAACAAGGCACCACGATGGGCAAGTGTGAACCTAGGGATTTTCATTTGCATGCAATGTTCAGGAATTCACCGAAGTCTTGGAGTTCATATATCAAAGGTGCGGTCTACAACTTTAGATACATGGTTGCCAGATCAAGTTTCTTTCATGCAATTAATGGGTAATGAGAAGTCAAATAAGCACTGGGAGGAAAAAATTCCACCAAATTTTGATAGAAGTAAATTGGGAATTGAGAAGTTTATCCGTGACAAGTATGTGGAGAAAAGATGGGCTTCAAAAGAAGAACTGCAATCAACTTCAAGGACAGGTGAAATAATCTATAATTTTGATGAGTCACCAAATGGAGGGGCTAGGAGTGGTATTCTGAAGAACAACAGGAGACTTTCTCTTGAAGAAAGTATTCTTGCTAACCACGTGGCACAAATTCTACCTCCAATAACAAGATCTCGTGGGGGTTTTACTTTTATAGACACGCAAAAGAAGAATTCACCTCCATTAAAAAGGCCATCCTCATCAGTTGATTTTGACAAGTCCACAGGAAAGAGCAATGGCACTGGTGACATTTTCAACTTGCTTTGCATCTATGATGATAACCAGAACTTCTCAACCATGCCTCCTTCAAGTTGGGCAACATTTGATTGAGATGTGCCAGCGTTTTAAGTTTATAGCTTGTTCAACTAATCCTTGGTGTAGAAGTCACAAGATTATAGTTACAGATGACGCTGTGAAGTGGCATGAGCATTGAGCTGCATAAGTTTAGTGTTTGTTACAGTACGATGTTTTGAATAATCAACACATTGCAGTAGGATATAACATCTACACCACTTTCACTTTGGTGTTGAGATCGTCCATAGTATGGTTTGGTTTGCAGTTAGTTCATGGTTCATTTTTCTTACAGCATTAACTAATTTGAGATGGGCAAGAGGATGGAGGACATAATAGTTATGTTTCTTCTTTCACTAAGTTTTCTTCTCTGGTCTGCGATAGATAAAAACATTGTAAATTTAATTATTACTTGACTTATATTTGTCCATCTTCTACTTTCCAGTATTATTTTTTCTTTT

>Glyma.08g057700.3 sequence-type=transcript locus=Glyma.08g057700 ID=Glyma.08g057700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
CCAAACTGAGACAGCAATGCTTTTGTTTGGGCTAATAAAACCGTTTTCTTTGTTTCTGCTTCTCAGTTGCTGAACCTAACCCACACACGCAACATTTTCCTTCCTTTCTTGTTTTGCTCTGCACTGTCACGTCAATATGAACGGGAAAGCCTCCATCTCCAAGGAGCTCAATGCCAAGCACGCCAAGATATTAGAAGGACTTCTTAAGCTGCCTGAGAACAGGGAATGCGCAGACTGCCGGAACAAGGCACCACGATGGGCAAGTGTGAACCTAGGGATTTTCATTTGCATGCAATGTTCAGGAATTCACCGAAGTCTTGGAGTTCATATATCAAAGTAATGGGTAATGAGAAGTCAAATAAGCACTGGGAGGAAAAAATTCCACCAAATTTTGATAGAAGTAAATTGGGAATTGAGAAGTTTATCCGTGACAAGTATGTGGAGAAAAGATGGGCTTCAAAAGAAGAACTGCAATCAACTTCAAGGACAGGTGAAATAATCTATAATTTTGATGAGTCACCAAATGGAGGGGCTAGGAGTGGTATTCTGAAGAACAACAGGAGACTTTCTCTTGAAGAAAGTATTCTTGCTAACCACGTGGCACAAATTCTACCTCCAATAACAAGATCTCGTGGGGGTTTTACTTTTATAGACACGCAAAAGAAGAATTCACCTCCATTAAAAAGGCCATCCTCATCAGTTGATTTTGACAAGTCCACAGGAAAGAGCAATGGCACTGGTGACATTTTCAACTTGCTTTGCATCTATGATGATAACCAGAACTTCTCAACCATGCCTCCTTCAAGTTGGGCAACATTTGATTGAGATGTGCCAGCGTTTTAAGTTTATAGCTTGTTCAACTAATCCTTGGTGTAGAAGTCACAAGATTATAGTTACAGATGACGCTGTGAAGTGGCATGAGCATTGAGCTGCATAAGTTTAGTGTTTGTTACAGTACGATGTTTTGAATAATCAACACATTGCAGTAGGATATAACATCTACACCACTTTCACTTTGGTGTTGAGATCGTCCATAGTATGGTTTGGTTTGCAGTTAGTTCATGGTTCATTTTTCTTACAGCATTAACTAATTTGAGATGGGCAAGAGGATGGAGGACATAATAGTTATGTTTCTTCTTTCACTAAGTTTTCTTCTCTGGTCTGCGATAGATAAAAACATTGTAAATTTAATTATTACTTGACTTATATTTGTCCATCTTCTACTTTCCAGTATTATTTTTTCTTTT

>Glyma.08g057700.4 sequence-type=transcript locus=Glyma.08g057700 ID=Glyma.08g057700.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGAAGATGGTCACAGGAAAACCATTCTCATGCTGCCACTCTCACAGCTGATGCTTGGGCACTTGTCTAGTCAATCTATTAGTAAGAGTTCAAGTGTGCAGCCCATACGCACAATTTCCCAGTTATCTTCTCTTTCCCAGTCATGTCGACTAAAAATATTAGAAGGACTTCTTAAGCTGCCTGAGAACAGGGAATGCGCAGACTGCCGGAACAAGGCACCACGATGGGCAAGTGTGAACCTAGGGATTTTCATTTGCATGCAATGTTCAGGAATTCACCGAAGTCTTGGAGTTCATATATCAAAGTAATGGGTAATGAGAAGTCAAATAAGCACTGGGAGGAAAAAATTCCACCAAATTTTGATAGAAGTAAATTGGGAATTGAGAAGTTTATCCGTGACAAGTATGTGGAGAAAAGATGGGCTTCAAAAGAAGAACTGCAATCAACTTCAAGGACAGGTGAAATAATCTATAATTTTGATGAGTCACCAAATGGAGGGGCTAGGAGTGGTATTCTGAAGAACAACAGGAGACTTTCTCTTGAAGAAAGTATTCTTGCTAACCACGTGGCACAAATTCTACCTCCAATAACAAGATCTCGTGGGGGTTTTACTTTTATAGACACGCAAAAGAAGAATTCACCTCCATTAAAAAGGCCATCCTCATCAGTTGATTTTGACAAGTCCACAGGAAAGAGCAATGGCACTGGTGACATTTTCAACTTGCTTTGCATCTATGATGATAACCAGAACTTCTCAACCATGCCTCCTTCAAGTTGGGCAACATTTGATTGAGATGTGCCAGCGTTTTAAGTTTATAGCTTGTTCAACTAATCCTTGGTGTAGAAGTCACAAGATTATAGTTACAGATGACGCTGTGAAGTGGCATGAGCATTGAGCTGCATAAGTTTAGTGTTTGTTACAGTACGATGTTTTGAATAATCAACACATTGCAGTAGGATATAACATCTACACCACTTTCACTTTGGTGTTGAGATCGTCCATAGTATGGTTTGGTTTGCAGTTAGTTCATGGTTCATTTTTCTTACAGCATTAACTAATTTGAGATGGGCAAGAGGATGGAGGACATAATAGTTATGTTTCTTCTTTCACTAAGTTTTCTTCTCTGGTCTGCGATAGATAAAAACATTGTAAATTTAATTATTACTTGACTTATATTTGTCCATCTTCTACTTTCCAGTATTATTTTTTCTTTT
Coding sequences of Glyma.08g057700
>Glyma.08g057700.1 sequence-type=CDS polypeptide=Glyma.08g057700.1.p locus=Glyma.08g057700 ID=Glyma.08g057700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAACGGGAAAGCCTCCATCTCCAAGGAGCTCAATGCCAAGCACGCCAAGGTGGAAGATGGTCACAGGAAAACCATTCTCATGCTGCCACTCTCACAGCTGATGCTTGGGCACTTGTCTAGTCAATCTATTAGTAAGAGTTCAAGTGTGCAGCCCATACGCACAATTTCCCAGTTATCTTCTCTTTCCCAGTCATGTCGACTAAAAATATTAGAAGGACTTCTTAAGCTGCCTGAGAACAGGGAATGCGCAGACTGCCGGAACAAGGCACCACGATGGGCAAGTGTGAACCTAGGGATTTTCATTTGCATGCAATGTTCAGGAATTCACCGAAGTCTTGGAGTTCATATATCAAAGGTGCGGTCTACAACTTTAGATACATGGTTGCCAGATCAAGTTTCTTTCATGCAATTAATGGGTAATGAGAAGTCAAATAAGCACTGGGAGGAAAAAATTCCACCAAATTTTGATAGAAGTAAATTGGGAATTGAGAAGTTTATCCGTGACAAGTATGTGGAGAAAAGATGGGCTTCAAAAGAAGAACTGCAATCAACTTCAAGGACAGGTGAAATAATCTATAATTTTGATGAGTCACCAAATGGAGGGGCTAGGAGTGGTATTCTGAAGAACAACAGGAGACTTTCTCTTGAAGAAAGTATTCTTGCTAACCACGTGGCACAAATTCTACCTCCAATAACAAGATCTCGTGGGGGTTTTACTTTTATAGACACGCAAAAGAAGAATTCACCTCCATTAAAAAGGCCATCCTCATCAGTTGATTTTGACAAGTCCACAGGAAAGAGCAATGGCACTGGTGACATTTTCAACTTGCTTTGCATCTATGATGATAACCAGAACTTCTCAACCATGCCTCCTTCAAGTTGGGCAACATTTGATTGA

>Glyma.08g057700.2 sequence-type=CDS polypeptide=Glyma.08g057700.2.p locus=Glyma.08g057700 ID=Glyma.08g057700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAACGGGAAAGCCTCCATCTCCAAGGAGCTCAATGCCAAGCACGCCAAGATATTAGAAGGACTTCTTAAGCTGCCTGAGAACAGGGAATGCGCAGACTGCCGGAACAAGGCACCACGATGGGCAAGTGTGAACCTAGGGATTTTCATTTGCATGCAATGTTCAGGAATTCACCGAAGTCTTGGAGTTCATATATCAAAGGTGCGGTCTACAACTTTAGATACATGGTTGCCAGATCAAGTTTCTTTCATGCAATTAATGGGTAATGAGAAGTCAAATAAGCACTGGGAGGAAAAAATTCCACCAAATTTTGATAGAAGTAAATTGGGAATTGAGAAGTTTATCCGTGACAAGTATGTGGAGAAAAGATGGGCTTCAAAAGAAGAACTGCAATCAACTTCAAGGACAGGTGAAATAATCTATAATTTTGATGAGTCACCAAATGGAGGGGCTAGGAGTGGTATTCTGAAGAACAACAGGAGACTTTCTCTTGAAGAAAGTATTCTTGCTAACCACGTGGCACAAATTCTACCTCCAATAACAAGATCTCGTGGGGGTTTTACTTTTATAGACACGCAAAAGAAGAATTCACCTCCATTAAAAAGGCCATCCTCATCAGTTGATTTTGACAAGTCCACAGGAAAGAGCAATGGCACTGGTGACATTTTCAACTTGCTTTGCATCTATGATGATAACCAGAACTTCTCAACCATGCCTCCTTCAAGTTGGGCAACATTTGATTGA

>Glyma.08g057700.3 sequence-type=CDS polypeptide=Glyma.08g057700.3.p locus=Glyma.08g057700 ID=Glyma.08g057700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCGCAGACTGCCGGAACAAGGCACCACGATGGGCAAGTGTGAACCTAGGGATTTTCATTTGCATGCAATGTTCAGGAATTCACCGAAGTCTTGGAGTTCATATATCAAAGTAATGGGTAATGAGAAGTCAAATAAGCACTGGGAGGAAAAAATTCCACCAAATTTTGATAGAAGTAAATTGGGAATTGAGAAGTTTATCCGTGACAAGTATGTGGAGAAAAGATGGGCTTCAAAAGAAGAACTGCAATCAACTTCAAGGACAGGTGAAATAATCTATAATTTTGATGAGTCACCAAATGGAGGGGCTAGGAGTGGTATTCTGAAGAACAACAGGAGACTTTCTCTTGAAGAAAGTATTCTTGCTAACCACGTGGCACAAATTCTACCTCCAATAACAAGATCTCGTGGGGGTTTTACTTTTATAGACACGCAAAAGAAGAATTCACCTCCATTAAAAAGGCCATCCTCATCAGTTGATTTTGACAAGTCCACAGGAAAGAGCAATGGCACTGGTGACATTTTCAACTTGCTTTGCATCTATGATGATAACCAGAACTTCTCAACCATGCCTCCTTCAAGTTGGGCAACATTTGATTGA

>Glyma.08g057700.4 sequence-type=CDS polypeptide=Glyma.08g057700.4.p locus=Glyma.08g057700 ID=Glyma.08g057700.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCGCAGACTGCCGGAACAAGGCACCACGATGGGCAAGTGTGAACCTAGGGATTTTCATTTGCATGCAATGTTCAGGAATTCACCGAAGTCTTGGAGTTCATATATCAAAGTAATGGGTAATGAGAAGTCAAATAAGCACTGGGAGGAAAAAATTCCACCAAATTTTGATAGAAGTAAATTGGGAATTGAGAAGTTTATCCGTGACAAGTATGTGGAGAAAAGATGGGCTTCAAAAGAAGAACTGCAATCAACTTCAAGGACAGGTGAAATAATCTATAATTTTGATGAGTCACCAAATGGAGGGGCTAGGAGTGGTATTCTGAAGAACAACAGGAGACTTTCTCTTGAAGAAAGTATTCTTGCTAACCACGTGGCACAAATTCTACCTCCAATAACAAGATCTCGTGGGGGTTTTACTTTTATAGACACGCAAAAGAAGAATTCACCTCCATTAAAAAGGCCATCCTCATCAGTTGATTTTGACAAGTCCACAGGAAAGAGCAATGGCACTGGTGACATTTTCAACTTGCTTTGCATCTATGATGATAACCAGAACTTCTCAACCATGCCTCCTTCAAGTTGGGCAACATTTGATTGA
Predicted protein sequences of Glyma.08g057700
>Glyma.08g057700.1.p sequence-type=predicted peptide transcript=Glyma.08g057700.1 locus=Glyma.08g057700 ID=Glyma.08g057700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MNGKASISKELNAKHAKVEDGHRKTILMLPLSQLMLGHLSSQSISKSSSVQPIRTISQLSSLSQSCRLKILEGLLKLPENRECADCRNKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQVSFMQLMGNEKSNKHWEEKIPPNFDRSKLGIEKFIRDKYVEKRWASKEELQSTSRTGEIIYNFDESPNGGARSGILKNNRRLSLEESILANHVAQILPPITRSRGGFTFIDTQKKNSPPLKRPSSSVDFDKSTGKSNGTGDIFNLLCIYDDNQNFSTMPPSSWATFD*

>Glyma.08g057700.2.p sequence-type=predicted peptide transcript=Glyma.08g057700.2 locus=Glyma.08g057700 ID=Glyma.08g057700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MNGKASISKELNAKHAKILEGLLKLPENRECADCRNKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQVSFMQLMGNEKSNKHWEEKIPPNFDRSKLGIEKFIRDKYVEKRWASKEELQSTSRTGEIIYNFDESPNGGARSGILKNNRRLSLEESILANHVAQILPPITRSRGGFTFIDTQKKNSPPLKRPSSSVDFDKSTGKSNGTGDIFNLLCIYDDNQNFSTMPPSSWATFD*

>Glyma.08g057700.3.p sequence-type=predicted peptide transcript=Glyma.08g057700.3 locus=Glyma.08g057700 ID=Glyma.08g057700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MRRLPEQGTTMGKCEPRDFHLHAMFRNSPKSWSSYIKVMGNEKSNKHWEEKIPPNFDRSKLGIEKFIRDKYVEKRWASKEELQSTSRTGEIIYNFDESPNGGARSGILKNNRRLSLEESILANHVAQILPPITRSRGGFTFIDTQKKNSPPLKRPSSSVDFDKSTGKSNGTGDIFNLLCIYDDNQNFSTMPPSSWATFD*

>Glyma.08g057700.4.p sequence-type=predicted peptide transcript=Glyma.08g057700.4 locus=Glyma.08g057700 ID=Glyma.08g057700.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MRRLPEQGTTMGKCEPRDFHLHAMFRNSPKSWSSYIKVMGNEKSNKHWEEKIPPNFDRSKLGIEKFIRDKYVEKRWASKEELQSTSRTGEIIYNFDESPNGGARSGILKNNRRLSLEESILANHVAQILPPITRSRGGFTFIDTQKKNSPPLKRPSSSVDFDKSTGKSNGTGDIFNLLCIYDDNQNFSTMPPSSWATFD*






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