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Report for Sequence Feature Glyma.08g056100

Feature Type:gene_model
Chromosome:Gm08
Start:4310689
stop:4314678
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.08g056100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G70300.1AT K+ uptake permease 6 JGI N/AIEA
GO:0006811GO-bp ion transport EnsemblGenomesN/AIEA
GO:0006813GO-bp potassium ion transport EnsemblGenomesN/AIEA
GO:0071805GO-bp potassium ion transmembrane transport EnsemblGenomesN/AIEA
GO:0071805GO-bp potassium ion transmembrane transport JGI N/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0015079GO-mf potassium ion transmembrane transporter activity EnsemblGenomesN/AIEA
GO:0015079GO-mf potassium ion transmembrane transporter activity JGI N/AIEA
PF02705PFAM K+ potassium transporter JGI N/AIEA

Expression Patterns of Glyma.08g056100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.08g056100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g06060 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g056100
>Glyma.08g056100.1 sequence-type=CDS polypeptide=Glyma.08g056100.1.p locus=Glyma.08g056100 ID=Glyma.08g056100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATTCTCATCTTGATGCAATCTTTGATGAAGATCACAAGAAGAAAACATGGAAGCAAACAACTCTGCTATCCTTTCAAATTGTGGGAATAGTTTATGGTCAACTGAGCACTGCACCTTTATATGTATTTGGGACAATGCAAAAGGGAGATCTTGCATCAGAAGAAGTCGTTTATGAACTATTTTCCTTCATTTTCTGGACACTCACAATAATATCTTTGGTCAAGTATGCCTCTATAGTGTTGAAAGCAGATGATGAAGGAGAGGGTGGTATTGTTGCTTTATACTCACTGTTGTGTAGAAATGCAAAAGTTGGGCTGCTCCCATGCGACAAAAGTGCCAATGAAGTTGTGCTTTATGAAGAGAGAAGTGGTTCAAAGCTCAAAGCAGATTCAAGAGCACGAAGGGCCATTGAGAAACACAAGATCTGTCACTATTTAATATTGTTCTTAGCCCTCTTTGGTTCCTGTATGACCATTGGGGACGCAGTGCTCACTCCAGCGCTTTCAGTGTACTCAGCTTCGACCGGCGTTCAGAGATCCCTGACAGACATATTGACAGACATATTTGCCTGGTCACCAGATACTCAGCAGAACGTGTCAAATGGTCTAAGAAGATATGTACCTGTTCCCTCTGCGTGTGTTATATTGGTTGGGCTGTTCATGCTGCAGCACTGCGGTACACGTAAAATTGGGATCATGTTTGCTCCAATCATCACTGCTTGGTTGTTGTTTGTTGCTGGGGTGGGAACGTATAATGTTTTCCACTGGGATGTAAAAATTATTTATAAAATATCCCCAGTCTACATATACAAATTCATCACACATATTGACATCCACAGATGGAGGTTGTTAGGGAGCGTCATTTTATGTGTAGCAGGATCGGAGGCAATGTTTGCAGATCTAGGCCATTTCTCCAAGAAATCAATTAAGATTACCTTTATATGCTTGATCTACCCGCTTCTTCTTCTATGCTATGCTGGTCAGGCTGCATATATCTCCAAAAATTTACATGCTCCAGATTTTAATCATCTTAGTCAATCTATGCCACGTCATTGCAGACACTTGTTCATAGTATTGTCCCTACTTTCTTCAGCTGTGGGAAGCCAAGCAACCATAACAGCGTGTTTCTCCATCATTAACCAGTGTCTGGCATTAAATTGCTTTCCCAGAGTTAAAGTTATTCACACATCAAAAACGATTCATGGGCAGATTTACATCCCCGATGTCAACTGGTTATTGATGATTTTTAGCCTCACTGTCACCATTGGTTTCAGAGACATTGTGAAAATTGGCAATGCAACAGGTTTGGCTATAATTTGTGGAATGCTTGTGACAACTAGTCTGATGTCACTGATCATTGCTCTGTATTGGGAGAAGAATTTGATGGTATCTGCGTGCTTTCTTGTATGTTTTGGGTTCCTTGAGGCTGCATATCTTTCAGCATGTCTGCTAGAATTCCACAAAGGAGCTTGGTATCTGGTTGTCCTATTGGCAGTGTCAATGACAGTGATGCTTTCATGGCATTATGGAACAATGAAGAAGTACGAGTTTGATTTGCAAAACAAGGTATCAACCGAATGGCTAATAGATATTAGTCCAGGCCTTGGGATTTCCAGGGTACCCGGAATCGGCTTCATTTACACCGACATAGTAGCAGGAATCCCAGCTTTCTTTTCACATTTTATAACTAATCTTCCTGCATTTCATCAAGTGTTGATCTTGGTGTCTTTCAAGTCTATAGCTGTGCCTTATGTACCAGAAAGTGAAAGGTATCTCATTGGTAGGATTGGGCCAAAGGATTACAAAATATATCGTTGCATTGTCAGAAGTGGATATTGTGACCACATAAGGGACACTGGTCATTTTGAGGAGCAGATAATTCGTTCTATTGGGGAATTCATATCCATTGAACAGAATGACATTGAGTCCATGGTATCCCCAGATGAAAGAATGATCATTATTGGAAATTCAAATTCAAGACTAGATGGAAATGCTTTAGTTCCTCTTGATGAAGTAGACTCATCATCATGCATGGTGAACAATGAATCTCAGATAAGTCCAGTAGATCATGACGCATTGGAGAGTAGGAACAAGAGAAAAAAGGTTCGGTTCATGTTGCCTGAGAATAGTCCTAAAATGCAGGTATCTGTGAGGAAGGAGCTTTTGGAGCTAATTGATGCCAGGGAGAGTGGCAGTGCCTATTTCTTGGGGCAGTCACATTTAGTGGTGCGTGATGGCACTAACTTTCTCAAGAGATTCTTAATCATGGTCTATCGTTTCAGTGAAAAAAATTGTCGGGAATCTCCTGTTGCTCTTAAGATCCCTCATGCTGCTCTTGTAGAAGTTGGTGTGATATGTACTATATAA
Predicted protein sequences of Glyma.08g056100
>Glyma.08g056100.1.p sequence-type=predicted peptide transcript=Glyma.08g056100.1 locus=Glyma.08g056100 ID=Glyma.08g056100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDSHLDAIFDEDHKKKTWKQTTLLSFQIVGIVYGQLSTAPLYVFGTMQKGDLASEEVVYELFSFIFWTLTIISLVKYASIVLKADDEGEGGIVALYSLLCRNAKVGLLPCDKSANEVVLYEERSGSKLKADSRARRAIEKHKICHYLILFLALFGSCMTIGDAVLTPALSVYSASTGVQRSLTDILTDIFAWSPDTQQNVSNGLRRYVPVPSACVILVGLFMLQHCGTRKIGIMFAPIITAWLLFVAGVGTYNVFHWDVKIIYKISPVYIYKFITHIDIHRWRLLGSVILCVAGSEAMFADLGHFSKKSIKITFICLIYPLLLLCYAGQAAYISKNLHAPDFNHLSQSMPRHCRHLFIVLSLLSSAVGSQATITACFSIINQCLALNCFPRVKVIHTSKTIHGQIYIPDVNWLLMIFSLTVTIGFRDIVKIGNATGLAIICGMLVTTSLMSLIIALYWEKNLMVSACFLVCFGFLEAAYLSACLLEFHKGAWYLVVLLAVSMTVMLSWHYGTMKKYEFDLQNKVSTEWLIDISPGLGISRVPGIGFIYTDIVAGIPAFFSHFITNLPAFHQVLILVSFKSIAVPYVPESERYLIGRIGPKDYKIYRCIVRSGYCDHIRDTGHFEEQIIRSIGEFISIEQNDIESMVSPDERMIIIGNSNSRLDGNALVPLDEVDSSSCMVNNESQISPVDHDALESRNKRKKVRFMLPENSPKMQVSVRKELLELIDARESGSAYFLGQSHLVVRDGTNFLKRFLIMVYRFSEKNCRESPVALKIPHAALVEVGVICTI*






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