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Report for Sequence Feature Glyma.08g047000

Feature Type:gene_model
Chromosome:Gm08
Start:3675941
stop:3678187
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g047000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G12400.1AT JGI N/AIEA
GO:0006289GO-bp nucleotide-excision repair JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0000439GO-cc transcription factor TFIIH core complex JGI N/AIEA
K10845KEGG DNA repair and recombination proteins JGI N/AIEA
KOG3451 KOG Uncharacterized conserved protein JGI N/AIEA
PTHR28580PantherFam GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 JGI N/AIEA
PTHR28580:SF1PantherFam GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 JGI N/AIEA
PF06331Pfam Transcription factor TFIIH complex subunit Tfb5 JGI N/AIEA

Gene model name correspondences to Glyma.08g047000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g05180 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g047000
>Glyma.08g047000.1 sequence-type=CDS polypeptide=Glyma.08g047000.1.p locus=Glyma.08g047000 id=Glyma.08g047000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTCAATGCCACTAAAGGAGTCTTTATTTCCTGTGACATACCTATGGCACAATATATCATCAACATGAATGCTTCATTGCCTGCATCTGACAAGTTCATTATACATATATTGGATAATACACATATGTTTGTCCAACCTCATGTTGAGCAAATGATACGAAGTCGAATTGCAAAGTTCAGAGAGGACAATACATATGTCAAGCCTAATTGA
Predicted protein sequences of Glyma.08g047000
>Glyma.08g047000.1.p sequence-type=predicted peptide transcript=Glyma.08g047000.1 locus=Glyma.08g047000 id=Glyma.08g047000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVNATKGVFISCDIPMAQYIINMNASLPASDKFIIHILDNTHMFVQPHVEQMIRSRIAKFREDNTYVKPN*






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