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Report for Sequence Feature Glyma.08g045900

Feature Type:gene_model
Chromosome:Gm08
Start:3617499
stop:3627319
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g045900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G14850.1AT NUP155 JGI N/AIEA
GO:0006913GO-bp nucleocytoplasmic transport JGI N/AIEA
GO:0005643GO-cc nuclear pore JGI N/AIEA
GO:0017056GO-mf structural constituent of nuclear pore JGI N/AIEA
K14312KEGG Messenger RNA biogenesis JGI N/AIEA
PTHR10350PantherFam NUCLEAR PORE COMPLEX PROTEIN NUP155 JGI N/AIEA
PTHR10350:SF6PantherFam NUCLEAR PORE COMPLEX PROTEIN NUP155 JGI N/AIEA
PF03177Pfam Non-repetitive/WGA-negative nucleoporin C-terminal JGI N/AIEA
PF08801Pfam Nup133 N terminal like JGI N/AIEA

Gene model name correspondences to Glyma.08g045900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g05070 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g045900
>Glyma.08g045900.1 sequence-type=CDS polypeptide=Glyma.08g045900.1.p locus=Glyma.08g045900 id=Glyma.08g045900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGTGGGAAGACGAGATTGTGATGCGTGATGTCACGAATGCGGGGCTTGTTGTCAGCGATCGCATTGGTCGCGAAGTTTCGTCTCAGCTCGACCTCGAAGAAGCTCTAGAAGCTTCCAGATACGCTAGCCACCCTTATTCCACTCACCCCCGAGAGTGGCCCCCTTTAGTTGAGGTGGTGAATACCTGGGAGTTGCCTCCCGTGCTCATTGAAAGATACAATGCAGCTGGTGGGGAAGGAACTGCTTTTTGTGGAATATTTCCTGAAATACGAAGGGCATGGGCATCTGTGGACAATTCATTGTTTCTTTGGCGTTTTGATAAGTGGGATGGCCAATGTCCTGAATTTAGTGGGGAAGAACAAGCTATTTGTGCAGTTGGTCTTGCAAAATCAAAACCTGGAGTTTTTGTTGAAGCTATCCAATATCTTTTAGTTTTAGCGACACCTGTTGAGTTAATTTTAGTAGGAGTATGCTGCTCTGGAGGAGCAGATGGTTCAGATCCATTTGCAGAAGTTACATTGCAGCCATTGCCAGAGCATACAATACCTTCTGATGGGGTTACAATGACTTGTGTAGCATGTACTGATAAGGGCCGCATTTTCCTCGCTGGTCGGGATGGCCACATATATGAGATTCTGTATTCAACTGGTTCTGGATGGCAAAAACGGTGCAGAAAAATCTGCATCACTGCTGGTTTAGGAAGTGTAATTTCAAGATGGGTTATACCAAATGTATTCAATTTTGGAGCTGTTGACCCCATTGTTGAAATGGTTTTCGACAACGAGAGACAAATATTGTATGCACGAACTGAAGAGATGAAGCTACAAGTTTATGTTCTAGGACCAAATGGTGATGGCCCATTAAAGAAAGTAGCTGAAGAAAGAAATCTTGTCAATCAGAGGGATGCACATTATGGTGCTAGACAATCCACAGGGTCAAGAGTCTCAAGTCGATCTCCAAAGCCATCTATTGTTTGCATCTCACCTTTATCTACACTTGAATCCAAGTGGCTACATCTTGTTGCTGTTTTATCTGATGGCAGAAGGATGTACCTATCTACCTCTCCTTCTAGTGGAAGCTTGACTGGGTTCAACACCAACCACCACAAGCCTAGCTGTTTAAAGGTTGTCACTACAAGGCCTGCTCCTCCTTGGGGTGTTAGTGGTGGTCTCACCTTTGGAGCCATGGCTCTTGCTGGTAGACCTCAGAATGAGGATCTCTCCCTGAAAGTTGAGGCAGCTTATTATTCTGCTGGAACCCTTATACTTTCTGATGCATCACCTTCTACCATGCCTTCACTCCTTGTTTTGAACAGGGATTCAAGCACGCAATCATCGCCGTCAGGTAATCTAGGAACAAGTACGAGGAGTTCCCGGGCATTAAGGGAGTCCGTATCTTCCTTACCAGTTGAAGGACGAATGCTTTCTGTGGCAGATGTTTTACCTTTGCCAGATACCGCAGCTACTGTGCAATCTCTATATTCGGAAATTGAGTTTGGTGGTTATGAGAGCTCTATGGAATCATGTGAAAGGGTGTCTGGCAAACTATGGGCCAGAGGAGATCTTGCAACCCAACATATACTACCAAGAAGAAGGATTGTTGTCTTCAGCACCATGGGCATGATGGAAATTGTTTTTAACAGGCCACTGGACATTATAAGGCGGCTATTGGAATCCAACTCTCCACGATCAGTTTTAGAAGATTTCTTCAATCGTTTTGGTGCAGGTGAGGCAGCTGCAATGTGTCTAATGCTAGCTGCAAGAATAGTGCATTCTGAAAACCTTATCAGCAATGTTATTGCTGAGAAGGCAGCTGAAGCTTTTGAGGACCCAAGAGTTGTTGGCATGCCACAACTTGAAGGCAGTAATGCATTATCAAACACAAGAAGTGCTGCTGGTGGATTTAGCATGGGCCAGGTTGTTCAGGAGGCTGAGCCTGTTTTTTCAGGTGCACATGAAGGGCTCTGTCTGTGTTCGTCTAGATTACTTTTTCCTCTGTGGGAACTTCCTGTAATGGTTGTAAAGGGAAGTTTAGGCCCTTCAGGCACTCTATCTGAAAATGGAGTAGTTGTGTGCAGACTCTCTGTTGGGGCTATGCAAGTCCTTGAACAGAAACTCCGATCTTTGGAGAAATTCTTAAGATCTAGAAGGAACCAGAGGAGGGGACTTTATGGCTGTGTAGCAGGTTTAGGAGATCTGAGTGGTTCGATTCTGTATGGTAATGGTTCGGCATTAGGAGTTGGGGATCGAAATATGGTAAGGAACTTATTTGGTGCATATTCCAGAAATATGGAGTCCAATGGTGGCATAACAACTAATAAACGGCAAAGGTTGCCATATAGTCCTGCTGAATTAGCTGCCATGGAGGTGAGGGCAATGGAGTGCATTAGGCAGTTGCTCCTTAGATCTGGTGAAGCCCTATTTTTGCTTCAACTTCTTTCACAGCATCATGTGACTCGATTGATTCAGGGATTTGATTCTAACCTTCAACAAGCATTAGTTCAGTTGACATTTCATCAACTAGTTTGTTCTGAGGAGGGAGACCATCTTGCTACAAGACTTATATCTGCTCTCATGGAGTATTATACTGGTCCTGATGGCAGGGGCACTGTAGATGACATTAGTAGGAGATTGAGAGATGGTTGTCCAAGCTACTATAAGGAGTCTGATTACAAATTCTTCCTAGCCGTGGAAGCCCTGGAGAGATCTGCTATGACCATAGATGCCGAGGACAAGGAGAATCTTGCAAGGGAAGCATTTAATTCCTTAAGTAAAGTTCCAGAGTCTGTGGACCTACGAACTGTTTGCAAACGTTTTGAGGATTTAAGGTTTTATGAAGCTGTAGTGCGCTTACCTCTACAAAAGGCACAGGCTCTTGACCCTGCAGGCGATGCTTATAATGATGATATTGATGCAACTGTCAGAGAGCAAGCACTTGCTCAGCGGGAGCTGTGTTATGAAATAATTATCAGTGCTTTGCGGTCTCTGAAAGGTGACAACTTACAGAGGGAATTTGGGACTCCTATTAAATCAACTGCTTCACAATCTGCTCTTGATCCAGCCTCTCGGAAAAAATATATATGTCAAATTGTTCAGCTGGGTGTCCAATCACCTGACAGAATTTTCCATGAGTATCTTTACCAGGCTATGATTGATTTAGGTCTTGAGAATGAATTGCTAGAGTATGGAGGTCCTGATCTGTTGCCATTTTTGCAAAGTGCTGGTCGTAATTCTATACACGAGGTTCGTGCTGTGACGGCCACAACTTCTCCAGTGGGGCAATCAGGAGCACCTATGTCATCTAATCAAGTCAAGTACTATGAACTTTTGGCACGGTATTATGTCTTGAAACGCCAACATATGCTTGCAGCTCATGCATTGCTTAGACTAGCTGAAAGGCGTTCTACTGATGGAGTTCCTACTCTTGAACAGAGGTGTCAATACCTAAGTAATGCAGTTCTACAGGCAAAAAATGCAACTAATAGTGATGGGTTAGTAGGTTCTGGTCGAATTTCCATTGACAGTGGGTTCCTAGATTTGCTTGAAGGGAAGCTCGCTGTTCTTTGGTTCCAGATAAAAATCAAAGAAGAACTAGAGTCTATGGCTTCCAGGTCTGATGTTTTACCTGGCACATCAGAGTCTGCCGAAAATGGTGTAGTCCCTGAGGGAAGTTCTACTGCTGATGCTAATTTTGCAAATGCAACACGAGAGAAGGCTAAAGAGCTAGCTTCAGATGTAAAGAGCATAACCCAGTTATATAATGAATATGCTGTTCCCTTTGGGCTCTGGGAGATATGCCTGGAGATGCTGTACTTTGCCAATTATTCTGGTGATACTGACAGCAGCATTGTCAGAGAGACATGGGCTAGACTTATGGATCAAGCTATATCAAGAGGGGGTATTGCTGAAGCTTGCTCGGTACTGAAGAGGGTCGGGCCCCGCATTTATCCTGGTGATGGAGCTGTTTTACCACTTGATATTATTTGTCTTCACCTAGAGAAGGCTGGACTGGAGAGGTTAAATTCAGGGGTTGAAGCTGTTGGAGATGAAGATGTTGCAAGAGCCCTTGTTTCTGCTTGTAAGGGTGCCGCTGAACCTGTATTAAATGCATACGACCAATTGTTATCAAATGGGGCTATTCTGCCATCCCCAAGTGTTAGATTACGTATGCTGAGATCGGTTCTAGTGGTACTTCGAGAGTGGGCAATGTCTGTATATTCACAAAGAATGGGTAGCAGTAGTGCCACTGGGCATTCCTTAATACTAGGTGGAGGATTCTCAACGGAACGTACTATTGCTAGCCAAGGAATCCGGGACAAGATCACAAGTGCAGCAAACAGGTATATGACTGAAGTGCGGAGGTTAGCCCTTCCACAGAACCAAACAGAACATGTCTACCGAGGTTTTAGAGAACTTGAAGAATCGTTTATAAGCCAACATTCATTTGATCGATTTTGA
Predicted protein sequences of Glyma.08g045900
>Glyma.08g045900.1.p sequence-type=predicted peptide transcript=Glyma.08g045900.1 locus=Glyma.08g045900 id=Glyma.08g045900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEVVNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEFSGEEQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSGGADGSDPFAEVTLQPLPEHTIPSDGVTMTCVACTDKGRIFLAGRDGHIYEILYSTGSGWQKRCRKICITAGLGSVISRWVIPNVFNFGAVDPIVEMVFDNERQILYARTEEMKLQVYVLGPNGDGPLKKVAEERNLVNQRDAHYGARQSTGSRVSSRSPKPSIVCISPLSTLESKWLHLVAVLSDGRRMYLSTSPSSGSLTGFNTNHHKPSCLKVVTTRPAPPWGVSGGLTFGAMALAGRPQNEDLSLKVEAAYYSAGTLILSDASPSTMPSLLVLNRDSSTQSSPSGNLGTSTRSSRALRESVSSLPVEGRMLSVADVLPLPDTAATVQSLYSEIEFGGYESSMESCERVSGKLWARGDLATQHILPRRRIVVFSTMGMMEIVFNRPLDIIRRLLESNSPRSVLEDFFNRFGAGEAAAMCLMLAARIVHSENLISNVIAEKAAEAFEDPRVVGMPQLEGSNALSNTRSAAGGFSMGQVVQEAEPVFSGAHEGLCLCSSRLLFPLWELPVMVVKGSLGPSGTLSENGVVVCRLSVGAMQVLEQKLRSLEKFLRSRRNQRRGLYGCVAGLGDLSGSILYGNGSALGVGDRNMVRNLFGAYSRNMESNGGITTNKRQRLPYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIQGFDSNLQQALVQLTFHQLVCSEEGDHLATRLISALMEYYTGPDGRGTVDDISRRLRDGCPSYYKESDYKFFLAVEALERSAMTIDAEDKENLAREAFNSLSKVPESVDLRTVCKRFEDLRFYEAVVRLPLQKAQALDPAGDAYNDDIDATVREQALAQRELCYEIIISALRSLKGDNLQREFGTPIKSTASQSALDPASRKKYICQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLQSAGRNSIHEVRAVTATTSPVGQSGAPMSSNQVKYYELLARYYVLKRQHMLAAHALLRLAERRSTDGVPTLEQRCQYLSNAVLQAKNATNSDGLVGSGRISIDSGFLDLLEGKLAVLWFQIKIKEELESMASRSDVLPGTSESAENGVVPEGSSTADANFANATREKAKELASDVKSITQLYNEYAVPFGLWEICLEMLYFANYSGDTDSSIVRETWARLMDQAISRGGIAEACSVLKRVGPRIYPGDGAVLPLDIICLHLEKAGLERLNSGVEAVGDEDVARALVSACKGAAEPVLNAYDQLLSNGAILPSPSVRLRMLRSVLVVLREWAMSVYSQRMGSSSATGHSLILGGGFSTERTIASQGIRDKITSAANRYMTEVRRLALPQNQTEHVYRGFRELEESFISQHSFDRF*






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