SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g042500

Feature Type:gene_model
Chromosome:Gm08
Start:3354215
stop:3358711
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g042500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G70660.1AT MMZ2,UEV1B JGI N/AIEA
6.3.2.19EC JGI N/AIEA
K10704KEGG DNA repair and recombination proteins JGI N/AIEA
KOG0896 KOG Ubiquitin-conjugating enzyme E2 JGI N/AIEA
PTHR24067PantherFam UBIQUITIN-CONJUGATING ENZYME E2 JGI N/AIEA
PF00179Pfam Ubiquitin-conjugating enzyme JGI N/AIEA

Gene model name correspondences to Glyma.08g042500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g04710 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g042500
>Glyma.08g042500.1 sequence-type=CDS polypeptide=Glyma.08g042500.1.p locus=Glyma.08g042500 id=Glyma.08g042500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTTCTGAAGGTTCCACTGTCGTCGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAATTGGAGATGGAACTGTTAGCTACGGAATGGATGATGCTGATGATATCTACATGCAGTCCTGGACTGGGACTATTATTGGCCCCCCTGGTGGCGTTCATGAAGGGCGTATCTACCAGCTGAAATTATTTTGTGGCAAGGATTATCCAGACAATCCACCAACTGTTAGATTTCAGACTAGGATTAACATGACTTGTGTCAACCAAGAAACTGGAGTGGTTGAGCCACATTTGTTTCCTATGCTTGCTAATTGGCAAAGAGAGTGTACAATGGAAGACATTTTGATGCAATTGAAGAAAGAAATGATGTCTCCACAAAATCGGAAGCTAGCTCAGCCACCTGAAGGCAATGAAGATGGCAGGATTGATCAAAAGGGGCTGGTGCTGAGATGTTGTATCATGTAA
Predicted protein sequences of Glyma.08g042500
>Glyma.08g042500.1.p sequence-type=predicted peptide transcript=Glyma.08g042500.1 locus=Glyma.08g042500 id=Glyma.08g042500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGSEGSTVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGGVHEGRIYQLKLFCGKDYPDNPPTVRFQTRINMTCVNQETGVVEPHLFPMLANWQRECTMEDILMQLKKEMMSPQNRKLAQPPEGNEDGRIDQKGLVLRCCIM*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo