SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research



Report for Sequence Feature Glyma.08g031100

Feature Type:gene_model
Chromosome:Gm08
Start:2456510
stop:2459693
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G56680.1AT EMB2755,SYNC1,SYNC1 ARATH JGI N/AIEA
6.1.1.22EC asparagine-tRNA ligase JGI N/AIEA
GO:0006418GO-bp tRNA aminoacylation for protein translation JGI N/AIEA
GO:0000166GO-mf nucleotide binding JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0004812GO-mf aminoacyl-tRNA ligase activity JGI N/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
K01893KEGG Transfer RNA biogenesis JGI N/AIEA
PTHR22594PantherFam ASPARTYL/LYSYL-TRNA SYNTHETASE JGI N/AIEA
PTHR22594:SF34PantherFam ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED JGI N/AIEA
PF00152Pfam tRNA synthetases class II (D, K and N) JGI N/AIEA
PF00458Pfam WHEP-TRS domain JGI N/AIEA
PF01336Pfam OB-fold nucleic acid binding domain JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma08g03500 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.08g031100.1 sequence-type=CDS polypeptide=Glyma.08g031100.1.p locus=Glyma.08g031100 id=Glyma.08g031100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAGACTCATCTTCTCCGCCGACGAACCAACTCGCTGCCACCACCCTCGACGAGGTTCCCAAAGCCAATTTCTCCGACCGCGTCCCCATTCGATCCATCATCTCCCGCCCCGACGGCGGCTCGGGCCTCGCCGGCAGCAAGGCGCGCGTCGGCGGCTGGGTGAAAACGGGACGCAAAGCCGACAAGGACGCTTTCGCCTTCCTAGAAATCAACGACGGAAGCTGCGCCGGCAACCTCCAGGTCATCGTCGAAGCCGCGCTCGGCGAACTCGGCCAACTCGTTCCCACCGGAACATGTGTCGTCTTCGACGGCCACCTGAAGCTCCCTCCTTCCGGCACCAAACAGAAGATCGAACTCCGCGCCGATAAGGTCCTCCACGTCGGCCCGGTCGATCCCGCCAAGTATCCTCTGCCCAAAATGAGACTCACTCTCGAGTTCCTCAGAGATTTCGTTCACCTTCGTTCCAGAACCAACACGATATCTGCTGTGGCTAGAATTAGAAATGCTCTTGCGTATGCTACACACACATTTTTCAACAAGGAAGGGTTTCTTTACGTGCACACGCCCATTGTTACCACGAGTGATTGTGAGGGTGCGGGTGAGATGTTTCAGGTGACAACTTTGCTGAGTGAGGCTGAGAGATTGGAGAAGGAGTTCTTGCAGAATCCGCCTCCGTCGGAGGCAGATGTGGAGGTGGCTAGGTTTGTTGTTCAGGAGAAAGGGGAGGTTGTGTCTCAGTTGAAAGCTGCCAAGGCGAGTAAGCAGGAGATCGGTGCTGCTGTGGATCAGCTTAAGAAGGCAAAGGAGAGTTTTGCTAAGGTGGAGGAGAGGTCTAAGCTTAAGCCTGGGATTCCCAGGAAGGATGATGGAAAGGTGGATTATGGGAAAGATTTCTTTGCACGTCAAGCATTTTTGACGGTTTCGGGTCAGCTTCAAGTTGAGTCTTATGTATGTGCTCTCAGTAGTGTGTATACCTTTGGACCAACATTTCGGGCGGAGAATTCTCACACTTCCAGGCATTTGGCTGAGTTTTGGATGGTAGAACCCGAGATTGCATTTGCAGAGTTGAAGGATGATATGAACTGTGCCGAGGCATATGTGAAATTCATGTGTCAGTGGTTACTTGACAACTGTCTCGAGGATATGGAGTTTATGGCTGATAAGTTTGATAAAGGTTGCATTGACCGTTTGAAATTGGTTGCTTCCACACCCTTCATTCGAGTTACATATACAGAAGCAGTGGAATTACTAGAAGATGCTGTGAAGAATGGTAAGAAATTTGAAAATGAAGTGAAATGGGGAATTGATTTAGCATCTGAGCATGAAAGATACCTAACAGAGGTGAAGTTTCAGAAGCCCGTCATTGTATACAACTATCCAAAAGATATCAAAGCATTCTACATGCGGCTCAATGATGACTTAAAGACAGTGGCGGCAATGGATGTGCTTGTACCCAAGGTTGGAGAGCTAATTGGTGGAAGCCAAAGGGAAGAGCGTTGTGATGTCATTCAGACAAGAATAAAGGAGATGGGTTTGCCTATTGAGCCATATGAGTGGTACCTTGATCTGAGGCGGTATGGAACAGTAAAACATGCCGGATTTGGGCTTGGCTTTGAAAGGATGATTCTCTTTGTCACCGGCCTGGAGAATATTAGAGATGTGATTCCCTTCCCACGATATCCTGGCAGAGCAGATCTATGA

>Glyma.08g031100.1.p sequence-type=predicted peptide transcript=Glyma.08g031100.1 locus=Glyma.08g031100 id=Glyma.08g031100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MADSSSPPTNQLAATTLDEVPKANFSDRVPIRSIISRPDGGSGLAGSKARVGGWVKTGRKADKDAFAFLEINDGSCAGNLQVIVEAALGELGQLVPTGTCVVFDGHLKLPPSGTKQKIELRADKVLHVGPVDPAKYPLPKMRLTLEFLRDFVHLRSRTNTISAVARIRNALAYATHTFFNKEGFLYVHTPIVTTSDCEGAGEMFQVTTLLSEAERLEKEFLQNPPPSEADVEVARFVVQEKGEVVSQLKAAKASKQEIGAAVDQLKKAKESFAKVEERSKLKPGIPRKDDGKVDYGKDFFARQAFLTVSGQLQVESYVCALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFAELKDDMNCAEAYVKFMCQWLLDNCLEDMEFMADKFDKGCIDRLKLVASTPFIRVTYTEAVELLEDAVKNGKKFENEVKWGIDLASEHERYLTEVKFQKPVIVYNYPKDIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERCDVIQTRIKEMGLPIEPYEWYLDLRRYGTVKHAGFGLGFERMILFVTGLENIRDVIPFPRYPGRADL*







Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo