SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g028900

Feature Type:gene_model
Chromosome:Gm08
Start:2309187
stop:2311261
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g028900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G29680.1AT JGI N/AIEA
3.6.1.9EC nucleotide diphosphatase JGI N/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
K01513KEGG Glycosylphosphatidylinositol (GPI)-anchored proteins JGI N/AIEA
KOG2645 KOG Type I phosphodiesterase/nucleotide pyrophosphatase JGI N/AIEA
PTHR10151PantherFam ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE JGI N/AIEA
PF01663Pfam Type I phosphodiesterase / nucleotide pyrophosphatase JGI N/AIEA

Gene model name correspondences to Glyma.08g028900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g03270 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g028900
>Glyma.08g028900.1 sequence-type=CDS polypeptide=Glyma.08g028900.1.p locus=Glyma.08g028900 id=Glyma.08g028900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTTCCAATCCTTTGTCTGCATTGACTTCCACAATGCCCGCGCCAATCTCAACCCAAGACCATGACGACCAAGAAGACTCTCCTTCATCAAAAGCTCTTCTTTCCTTCAGCACCGACTCTTCTTCTTCTTTTTCTTCTTCTTCTTCCTCTTCTCACAAACCCCTCTTCATCACCCTCATCCTCATCACTTTCATTGCCTTATCAACATCCTTCGCCTTCGCCTTTCTCTACTTCTCTTCAAAACCACCACTTTCACCTTCTCCTTCTTCTCTCTCTCTCTTCTCATCAAAAGCTCGTCCTCTCTCCAAACTCAAACGCCCCGTCGTCCTCCTAGTCTCCTCCGACGGCTTTCGTTTCGGTTACCAATTCAAAGCCCCAACTCCCCACATTTCCCGTTTGATCGCTAACGGAACCGAAGCTGAATCCGGTTTGATTCCGGTTTTCCCCTCTCTCACTTTCCCCAACCATTACTCCATCGCCACTGGCCTCTACCCTGCTTACCACGGCATCATCAATAACCACTTCACCGATCCACTCTCCGGGGAACCCTTTTACATGGGTAACAGCCATGACCCCAAGTGGTGGCTCGGGGAACCCTTGTGGGAAACTGTTCTCAAAAACGGATTAAAGGCTGCAACTTATTTCTGGCCTGGTTCTGAGGTAAATAAGGGTCCTTGGACTTGTCCTTTCAATTTTTGTATCCGCTATAATGCTTCTGTTTCATTTGAGGATAGGGTTGATGCGGTTTTGGGGTACTTTGATTTGCCTAGTGATCAGATTCCTGATTTCATGACGCTTTATTTTGAGGACCCTGATCATCAGGGTCACAAGGTTGGTGCTGATGATCCTCTGATCACTGAGGCTGTTGCTAGGATTGATAGAATGGTGGGGAGGTTGATTAGGGGTTTGGAGGAAAGAGGGGTTTTCGAGGATGTTAGTATTATTATGGTTGGAGATCATGGAATGGTTGGTACTTGTGATAAGAAGTTGATTTTTCTTGATGATTTGGCTCCTTGGATTGATGTTCCTAAAGATTGGGTTGTCACGCATACTCCTGTGCTTGCAATTCGTCCGCCTTCTGGTAATGATCCTGCGGATGTTGTTGCTAAGATGAATGAAGGGTTGAGCTCGGGGAAAGTTGACAATGGGAAGTTTTTGAGGGTGTATTTGAAAGAGGATCTGCCTAGTCGGCTTCATTATGCTGCGAGTGATCGGATTGCACCGATTATTGGGTTGATCGAGGAAGGTTTTAAGGTTGAGCAGAAGAGAACAAAGCGCCAAGAGTGTGGCGGTTCGCACGGTTATGACAATGCGGTTTTCTCCATGAGGACTATTTTCATTGGACATGGTCCTCGATTTGCTAGAGGGAGGAAGATACCGTCGTTTGAAAATGTTGAGATTTATAATTTGATTACTTCTATTCTCAAGATAAAGGGAGCACCTAATAATGGCTCTGCCTCATTTGCAGAGTCTGTTCTTCTATCTGCTGCATAA
Predicted protein sequences of Glyma.08g028900
>Glyma.08g028900.1.p sequence-type=predicted peptide transcript=Glyma.08g028900.1 locus=Glyma.08g028900 id=Glyma.08g028900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGSNPLSALTSTMPAPISTQDHDDQEDSPSSKALLSFSTDSSSSFSSSSSSSHKPLFITLILITFIALSTSFAFAFLYFSSKPPLSPSPSSLSLFSSKARPLSKLKRPVVLLVSSDGFRFGYQFKAPTPHISRLIANGTEAESGLIPVFPSLTFPNHYSIATGLYPAYHGIINNHFTDPLSGEPFYMGNSHDPKWWLGEPLWETVLKNGLKAATYFWPGSEVNKGPWTCPFNFCIRYNASVSFEDRVDAVLGYFDLPSDQIPDFMTLYFEDPDHQGHKVGADDPLITEAVARIDRMVGRLIRGLEERGVFEDVSIIMVGDHGMVGTCDKKLIFLDDLAPWIDVPKDWVVTHTPVLAIRPPSGNDPADVVAKMNEGLSSGKVDNGKFLRVYLKEDLPSRLHYAASDRIAPIIGLIEEGFKVEQKRTKRQECGGSHGYDNAVFSMRTIFIGHGPRFARGRKIPSFENVEIYNLITSILKIKGAPNNGSASFAESVLLSAA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo