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Report for Sequence Feature Glyma.08g027300

Feature Type:gene_model
Chromosome:Gm08
Start:2183054
stop:2187863
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g027300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G35400.1AT JGI N/AIEA
5.4.99.12EC tRNA pseudouridine38-40 synthase JGI N/AIEA
GO:0001522GO-bp pseudouridine synthesis JGI N/AIEA
GO:0009451GO-bp RNA modification JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0009982GO-mf pseudouridine synthase activity JGI N/AIEA
KOG4393 KOG Predicted pseudouridylate synthase JGI N/AIEA
PTHR11142PantherFam PSEUDOURIDYLATE SYNTHASE JGI N/AIEA
PTHR11142:SF10PantherFam TRNA PSEUDOURIDINE SYNTHASE JGI N/AIEA
PF01416Pfam tRNA pseudouridine synthase JGI N/AIEA

Gene model name correspondences to Glyma.08g027300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g03090 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g027300
>Glyma.08g027300.1 sequence-type=CDS polypeptide=Glyma.08g027300.1.p locus=Glyma.08g027300 id=Glyma.08g027300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTCTTTATGCTTAGTGCTTACTCTGTTGGCATTGGCAAACATATATTCATCTGTTTCTCAAGACACCTTCAGCACCATCAACATCAATATCGCTTACTCTTTCATTCCTCCATTTCCATGAATAACCTACGCCAAACTGAAACTCACGTGCATTACAACCACACTCATCCCTCCAAATACGCAAGATGGACCGCTAGAGAGAGCTTCGAATTTATGTATGCAAGGCCTTGGCAACGAGTAAATGATTTTTACTTGAACATTGTCCGTGCCAACTTGTCTCTGCCACTTCTCTTCGGAGCCCAGACACTTGTTGTTGATCACAATGATACTGGAATTGCAGCACTTTCTGGTTCAAGTGAGTTGGAAAGTGTTGCATCTGAGGATCGCAGTGGGAGGTGGGCAAGGACAACCTTTAAAATCATTCTTTCGTATCACGGGGGTTCATTTGATGGGTGGCAAAAGCAGCCAGGCTTGAACACCGTCCAAAGCATAGTTGAAGGGTCACTTGGTAAATTTGTTGATGAAAAGAAAACTCAACTGCTCAAGGACAAAGGTTTGCCTATTGAAGGTTGTGCTATTGTTGCTGGTCGTACAGACAAAGGAGTGACAGGCCTTCAACAAGTCTGTTCTTTCTACACTTGGAAGAAGGATGTTAAACCAAGAGATATTGAGGATGCTATCAATCATGCAGCACCAGGAAAACTTAGGGTCATATCAGTTTCTGAGGTGTCACGTGTCTTTCATCCTAATTTCTCTGCCAAATGGAGGCGTTACCTTTATATTTTTCCACTCACCAATGGAGGGTATACTGACCAAAGTAGTGACAATGGGGAGTTTTATGACAGTTTTAAATATAATGAAATTCATGATTCTGCCAGCAAGGATGAGTTAGAAAACGAAAAGAAATCCTATGCGTTCAGCATAAGCAAGGTAAATCGGCTTTTGCGAAAATTAGAAGGAAAATTGTTATCCTACAAAATGTTTGCCCGTGATACAAAAGCTTCAAGAAATGATGGTCCACCAACTGAGTGTTTTGTTTACCATGCTCGAGCTATGGAAGTCAAACTGCCTGCAACTGATCATGGAGAAGAAACAAAGGTTATGTGCGTTGAGCTGGTAGCTAATCGCTTTTTGCGTAAGATGGTTCGAGTGCTTGTGGCGACCTCAATTAGAGAAGCTGCTGCTGGTGCTGAAGATGATGCATTGATAAAGCTCATGGATGCCACATGTAGGCGTGCTACTGCTCCTCCCGCACCCCCTGATGGTTTATGTCTAGTTGATGTAGGCTATACTGAATTTGAGCCCCAAAAATGCTTCATTCTGATAGAGTAA
Predicted protein sequences of Glyma.08g027300
>Glyma.08g027300.1.p sequence-type=predicted peptide transcript=Glyma.08g027300.1 locus=Glyma.08g027300 id=Glyma.08g027300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLFMLSAYSVGIGKHIFICFSRHLQHHQHQYRLLFHSSISMNNLRQTETHVHYNHTHPSKYARWTARESFEFMYARPWQRVNDFYLNIVRANLSLPLLFGAQTLVVDHNDTGIAALSGSSELESVASEDRSGRWARTTFKIILSYHGGSFDGWQKQPGLNTVQSIVEGSLGKFVDEKKTQLLKDKGLPIEGCAIVAGRTDKGVTGLQQVCSFYTWKKDVKPRDIEDAINHAAPGKLRVISVSEVSRVFHPNFSAKWRRYLYIFPLTNGGYTDQSSDNGEFYDSFKYNEIHDSASKDELENEKKSYAFSISKVNRLLRKLEGKLLSYKMFARDTKASRNDGPPTECFVYHARAMEVKLPATDHGEETKVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDALIKLMDATCRRATAPPAPPDGLCLVDVGYTEFEPQKCFILIE*






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