SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g025500

Feature Type:gene_model
Chromosome:Gm08
Start:2014050
stop:2017726
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g025500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G23920.1AT BAM1,BMY7,TR-BAMY JGI N/AIEA
3.2.1.2EC beta-amylase JGI N/AIEA
GO:0000272GO-bp polysaccharide catabolic process JGI N/AIEA
GO:0016161GO-mf beta-amylase activity JGI N/AIEA
K01177KEGG Starch and sucrose metabolism JGI N/AIEA
PTHR31352PantherFam FAMILY NOT NAMED JGI N/AIEA
PTHR31352:SF7PantherFam BETA-AMYLASE JGI N/AIEA
PF01373Pfam Glycosyl hydrolase family 14 JGI N/AIEA

Proteins Associated with Glyma.08g025500
LocusGene SymbolProtein Name
BMY1-3 Beta-amylase 1 gene 3

Gene model name correspondences to Glyma.08g025500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g02920 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g025500
>Glyma.08g025500.1 sequence-type=CDS polypeptide=Glyma.08g025500.1.p locus=Glyma.08g025500 id=Glyma.08g025500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCATCCTGTCCCAATCCACCGCCAGCTTCTCCTTCGTCTCCACTCGGACCGATTCCACTCACCTAACTCGCTTCCCCTGCCGCGTCACCTTCCGAGCCCGCTCTCCCCCTCTCCGCCCCGCCCTCGTCTCTTCGCGCCTCAACTCCTCCAGGTCCCCCGACGCCGGCGGCTCCCTCTCGCCGGACAACGGCGGCGGCGACGTCGCCTACCAGCTCCACCACGACTTCTCTCCGCAGCGCCGTCGCCGCGGCTCGCCGGTCTTCGTCACGCTGCCGGTGAATTCCATCGGTCGGGATGGCCGTGTCGCGAGGCCCAAGGCGATGATGTTCTCGCTTAAGGCGCTTGCCACGGCCGGCGTGGAAGGCGTGGTTATTGAAATTTGGTGGGGATTGGTTGAGAAGAAGAAACCTAGGGTTTACGATTGGAGAGGGTATGAGGAACTCGTCGCGATGGCGTGCAAGTGTGGCCTTAAGGTTCGGGCGGTTCTCGCCTTTCATCAGCATGGCACGGGACCTGATGATCCCAATTGGATGCCACTTCCTCTATGGGTGCTTGATGAGATACAGAAAGATACAGAGTTAGCGTATTGTGACAGGTTTGGACAAAGAAATATTGAATACATTTCCCTTGGATGTGATATTCTGCCTGTGTTATGTGGGCGTTCTCCTATTCAAGCATATGCAGATTTTATGAGGAATTTTAGGGACACTTTTGAGTCTTTGCTTGGCGTTGTCATCACAGGTGTACAGATTGGCATGGGTCCTGGTGGTGAACTAAGATATCCTTCATTCTCTTCACAGGAGCCAAATTTGGCTTGGTCTCATGAACTTGGAGAGTTTCAGTGCTATGATAAGTATATGCTTGCTTCTCTGAATGCCTCTGCAAGAAATATTGGAAAGCGTGAATGGGGAAATGGTGGTCCATTTGGTAGTGAAAGTTTGATGCAAAATCCTGAGCATACTGATTTTTTCAGAAATGACGGTGGCTCTTGGGACACACCATATGGTAAATTTTTTCTTGAATGGTACTCAGATATGCTGCTGCTGCATGGGGAGAGGATTTGTAGGGAAGCTGAAACTATATTTAGGGGTACAGAAGTCCATATATCAGCAAAATTGGCTGCCATTCACTGGCATTATGCCATGCAATCCCACCCATCAGAGTTAACAGCTGGCTATTATAATACTTCTAACAGGGACGGATACTTACCCATTGCTCGTATGTTTAGCAAGTATGGATTCTCAATGTGCTGCTCTTGTTTTGAAATGCAAGATGCTGTAACGCAGAAGATCAATCCAGATGGTAGTCCTGAAGGTTTTCTTAGACAGCTTTTGCTGGTTGCTAGGCTCTGTGATATATCACTCGAAGGTCAAAATTTTTCAACTAATTTGGATGATGGTGCATTCACCCAGGTGCTTAAGATGTCAAAATTTTACTCAGATGGGATTGAGAAGCGACCTTTCTCATTCAACTTTGTAAGAATGGACAAAAGATTGTTTGAATCCCGAAATTGGGATCGGTTTACTCGTTTTGTGAGACAATTGTCTAATGGAAACATTTTTCGAGCCAGATTAAATTCTGTTCGTGAAGTACGGTTGAAGACCACACCAGTGGTAGCAGCAGTGGGACTGTTGTACCACCTATATCAGCACTCTTGA
Predicted protein sequences of Glyma.08g025500
>Glyma.08g025500.1.p sequence-type=predicted peptide transcript=Glyma.08g025500.1 locus=Glyma.08g025500 id=Glyma.08g025500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAILSQSTASFSFVSTRTDSTHLTRFPCRVTFRARSPPLRPALVSSRLNSSRSPDAGGSLSPDNGGGDVAYQLHHDFSPQRRRRGSPVFVTLPVNSIGRDGRVARPKAMMFSLKALATAGVEGVVIEIWWGLVEKKKPRVYDWRGYEELVAMACKCGLKVRAVLAFHQHGTGPDDPNWMPLPLWVLDEIQKDTELAYCDRFGQRNIEYISLGCDILPVLCGRSPIQAYADFMRNFRDTFESLLGVVITGVQIGMGPGGELRYPSFSSQEPNLAWSHELGEFQCYDKYMLASLNASARNIGKREWGNGGPFGSESLMQNPEHTDFFRNDGGSWDTPYGKFFLEWYSDMLLLHGERICREAETIFRGTEVHISAKLAAIHWHYAMQSHPSELTAGYYNTSNRDGYLPIARMFSKYGFSMCCSCFEMQDAVTQKINPDGSPEGFLRQLLLVARLCDISLEGQNFSTNLDDGAFTQVLKMSKFYSDGIEKRPFSFNFVRMDKRLFESRNWDRFTRFVRQLSNGNIFRARLNSVREVRLKTTPVVAAVGLLYHLYQHS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo