SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g023900

Feature Type:gene_model
Chromosome:Gm08
Start:1909069
stop:1917504
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g023900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G23940.1AT JGI N/AIEA
GO:0006508GO-bp proteolysis JGI N/AIEA
GO:0004222GO-mf metalloendopeptidase activity JGI N/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
GO:0016887GO-mf ATP hydrolysis activity JGI N/AIEA
PTHR23076PantherFam METALLOPROTEASE M41 FTSH JGI N/AIEA
PF01434Pfam Peptidase family M41 JGI N/AIEA
PF07728Pfam AAA domain (dynein-related subfamily) JGI N/AIEA

Gene model name correspondences to Glyma.08g023900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g02780 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g023900
>Glyma.08g023900.1 sequence-type=CDS polypeptide=Glyma.08g023900.1.p locus=Glyma.08g023900 id=Glyma.08g023900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGAATATTCTCTCCTCGCCCCACTTTCGCATCACCAAATCTCACTCCCCCCACCGCTATGGAACTCCGAAGCGAACTCCGAGGCACGTTCCGACCCAACTTCTTCTCCTACGAAGGTCACCCACAGTGCTCTGCAAATCCTCTTCCGCGACTAACGAACCCGGTTCGGACGATTTCGTGAGCCGGGTTCTGAAGGAAAACCCGAGCCAAGTGCAACCCAAGTATCTAATCGGCGACAAGTTATATACTTTGAAAGAAAAGGAGAATTTGAGAAAATTATCCAATGCGGGTATTTTAGATGTGCTCAAGAGGTTGAAATCAACGAAGCCTCAGAGCAAGAGTGAGAATGTGAGTGAGGCTTCGGGAGAGAGAGATTCTGTGTATTTGAAAGACTTGTTGAAGGAGTATAGAGGGAAACTTTACGTGCCTGAGCAACTTTTTGGCACAGAGTTGTCGGAGGAAGAAGAGTTTAACAGAAATGTAAACGAGTTGCCCAAAATGAGCATTGGGGAGTTCAGGAAGGCTTTGAGCAAAGACAAAATCAAGTTGATAACTTCAAAGGGAGGTGGAGGTCTTTATAGGGATTTTGTTGTGGAGTTGAAGAAAATTCCTGGTGATAAAAGCTTGCACACAACCAAATGGGTTCTCAGGCTGGGTAATGGGGAAGCTCAAGCAATCATGGCTGACTACACTGGACCACGATATGAGATCGAGAGGAGCCATACTATGTCTTGGGTGGGGAAAACACCGGAGTACCCTCATCCAGTTGCAACTTCCATATCTAGTAGAGTAGTGGTTGAGCTTGCAGTGGTGACAGGCTGCGTGGCTGTAGCAGCAGTTATAGCTGGTGGCTTCCTTGCATCAGCATTTTTTGCTGCAACCAGTCTTGTAGCTGTGATGGCTGTCTATGTTGTGTGGCCTATAGCCAAACCGTTCCTCAAGCTTTTTCTTGGTCTCACCCTAGCAATTTTGGAGAAGATTTGGGATAATATTGTTGATTTTTTCAGTGATGGTGGCATTTTGTCTAAGATATCTGAGATTTACACTTTTGGTGGATTTTCTGCTAGCCTTGAGGCATTGAAACCAATTATGATTGTAGTTTTGACTATGGTCCTTCTTGTTCGCTTCACCCTTTCAAGAAGACCTAAAAACTTTAGGAAGTGGGATCTTTGGCAGGGAATAGACTTCTCACGATCTAAAGCTGAGGCTCGTGTTGATGGTTCAACTGGAGTCAAGTTTTGTGATGTAGCTGGAATTGATGAGGCAGTTGAGGAACTTCAAGAGTTGGTGAGATACCTAAAAAATCCCGAGTTGTTTGATAAAATGGGGATCAAACCTCCACATGGTGTTCTTCTTGAGGGCCCTCCTGGATGTGGCAAGACCTTGGTAGCCAAGGCTATTGCTGGTGAAGCTGGCGTTCCATTTTACCAAATGGCCGGATCAGAATTTGTGGAAGTTTTAGTTGGTGTTGGTTCTGCACGTATTAGGGATTTATTTAAGAGAGCCAAGGTAAACAAACCATCAGTTGTATTCATAGATGAAATTGATGCGTTGGCTACTAGGCGCCAAGGTATTTTCAAGGAGAACACAGATCACCTGTATAATGCAGCCACCCAGGAAAGGGAAACTACATTGAACCAATTGTTGATAGAGCTTGATGGTTTTGATACTGGAAAGGGTGTCATATTTCTAGCCGCCACAAATCGTAAGGATTTGTTAGATCCAGCACTTCTTCGTCCAGGTCGCTTCGATCGAAAGATCAGGATTCGCCCACCTAGTGCCAAAGGAAGACATGATATTTTGAAAATCCATTCTAGTAAAGTAAAAATGTCAGAGTCTGTCGATTTATCCAGCTATGCACAGAACCTACCTGGATGGTCTGGAGCGAGATTGGCTCAATTGGTCCAAGAGGCAGCTCTTGTGGCTGTTAGGAAACAGCACAACTCAATTCTTCAGTCAGATATGGATGATGCAGTTGACAGACTTACAGTTGGACCTAAACGTGTTGGAATAGAATTAGGTTACCAAGGGCAATGTCGTAGAGCTACTACTGAATTGGGACTTGCATTAACTTCTCATCTGCTTCGGCGATATGAGCATGCAAAAGTTGAATGCTGTGATCGCATCTCAATAGTACCTCGTGGTCAGACATTGTCTCAATTAGTATTTCATCGACTTGATGATGAATCATATATGTTTGAACGTCGACCTCAATTGCTTCATCGGCTTCAGGTTCTGCTTGGAGGTAGAGCTGCTGAGGAGGTCATCTATGGACGTGACACATCAAAAGCCTCAGTTGATTACCTTGCAGATGCATCCTGGCTTGCACGCAAAATATTAACCATATGGAATTTGGAGAATCCAATGGTCATACATGGTGAACCACCACCTTGGAGGAAGTCAGTTAAATTTGTTGGTCCAAGGCTGGATTTTGAAGGGTCTCTTTATGATGACTACAACTTGATCGAACCCCCACTAAATTTTAAGATGGATGATCAAGTTGCACAAAGGACTGAAGAGTTGATACGGGACATGTACAGAAAGACGGTGTCTCTCCTTAGGAGGCACCATGCTGCTTTGCTCAAAACTATTAAGGTTCTTCTCGATCAGAAGGAGATCAGTGGTGAGGAAATAGAGTTCATTCTGAACAAATACCCTCCACAAACACCTATATATCTTTTGGAAGAGGAATATGCTGGTAACCTTCCATTCACCAGAGAACAAGTGCATGATTTGGAGTATGCCTTAAAAATTCAATCAAACGAAGAAACCATGTGA
Predicted protein sequences of Glyma.08g023900
>Glyma.08g023900.1.p sequence-type=predicted peptide transcript=Glyma.08g023900.1 locus=Glyma.08g023900 id=Glyma.08g023900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMNILSSPHFRITKSHSPHRYGTPKRTPRHVPTQLLLLRRSPTVLCKSSSATNEPGSDDFVSRVLKENPSQVQPKYLIGDKLYTLKEKENLRKLSNAGILDVLKRLKSTKPQSKSENVSEASGERDSVYLKDLLKEYRGKLYVPEQLFGTELSEEEEFNRNVNELPKMSIGEFRKALSKDKIKLITSKGGGGLYRDFVVELKKIPGDKSLHTTKWVLRLGNGEAQAIMADYTGPRYEIERSHTMSWVGKTPEYPHPVATSISSRVVVELAVVTGCVAVAAVIAGGFLASAFFAATSLVAVMAVYVVWPIAKPFLKLFLGLTLAILEKIWDNIVDFFSDGGILSKISEIYTFGGFSASLEALKPIMIVVLTMVLLVRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFCDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVVFIDEIDALATRRQGIFKENTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRKDLLDPALLRPGRFDRKIRIRPPSAKGRHDILKIHSSKVKMSESVDLSSYAQNLPGWSGARLAQLVQEAALVAVRKQHNSILQSDMDDAVDRLTVGPKRVGIELGYQGQCRRATTELGLALTSHLLRRYEHAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGRDTSKASVDYLADASWLARKILTIWNLENPMVIHGEPPPWRKSVKFVGPRLDFEGSLYDDYNLIEPPLNFKMDDQVAQRTEELIRDMYRKTVSLLRRHHAALLKTIKVLLDQKEISGEEIEFILNKYPPQTPIYLLEEEYAGNLPFTREQVHDLEYALKIQSNEETM*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo