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Report for Sequence Feature Glyma.08g016400

Feature Type:gene_model
Chromosome:Gm08
Start:1297266
stop:1305291
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g016400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G41370.1AT ATXPB1,XPB1 JGI N/AIEA
3.6.4.12EC DNA helicase JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
GO:0016787GO-mf hydrolase activity JGI N/AIEA
K10843KEGG DNA repair and recombination proteins JGI N/AIEA
PTHR11274PantherFam RAD25/XP-B DNA REPAIR HELICASE JGI N/AIEA
PTHR11274:SF0PantherFam GENERAL TRANSCRIPTION AND DNA REPAIR FACTOR IIH HELICASE SUBUNIT XPB JGI N/AIEA
PF00271Pfam Helicase conserved C-terminal domain JGI N/AIEA
PF04851Pfam Type III restriction enzyme, res subunit JGI N/AIEA
PF13625Pfam Helicase conserved C-terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.08g016400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g01970 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g016400
>Glyma.08g016400.1 sequence-type=CDS polypeptide=Glyma.08g016400.1.p locus=Glyma.08g016400 id=Glyma.08g016400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGATACGGTGAAAAAGGAGGACGACCTCCATTCAAAAAGCACAAGGCCTCAACTAAATTCGAAGATCCCCAAAAAGGAATCGCCTACGATGACGATGGTTATGGCGGCGAAGATGCCTACGACGATGACGATGGTAAAACCAAGGATTTTAGCAAATTAGAGCTGAAACCGGATCACACCAATCGCCCTCTGTGGGCTTGTGGCAATGGCCGCATATTCCTGGAGACTTTCTCGCCTTTGTACAAGCATGCTTATGATTTTCTTATCGCCATCGCTGAGCCTGTTTGCAGGCCGGAGTCTATGCACGAATACAACCTTACTCCACACTCGCTGTATGCGGCTGTTTCGGTTGGTCTGGAAACAGAAACAGTCATAAATGTTTTGAACAAGTTATCCAAGACCAAGCTTCCCAAAGAGATGATTAAATTTATACATGATTCTACTGCAAATTATGGCAAAGTGAAACTCGTCCTCAAGAAGAATCGATATTTCATTGAATCTCCATTTCCAGAGGTATTGAAGACATTGCTCAGGGATGAAACTATATCTCGATCAAGGCTTATTTCTGAGAATGTAAATGGAGATGGATTTACCATCAGCAAAGCAGCAGGTGAAATTGAAGGCACTCATGATGAGTTGCTAAATGAAGCAGAAGTTGCAGCGGTTGCGGAAGAGAAAGAAGCCCATTCATTTGAAATTGATCCTTCTCAGGTTGAAAATGTAAAGCAACGATGCTTGCCAAATGCGTTAAATTATCCCATGTTGGAGGAGTATGACTTCAGAAATGATACTGTGAACCCAGATCTTGACATGGAACTAAAGCCTCAAGCACAACCACGGCCATATCAAGAGAAGAGCCTTAGTAAAATGTTTGGAAATGGTAGAGCAAGATCTGGTATAATAGTTTTACCCTGTGGTGCTGGAAAGTCCTTAGTTGGTGTTTCTGCAGCTTGCCGGATAAAAAAAAGCTGCCTCTGTTTGGCAACAAATGCTGTTTCTGTAGATCAGTGGGCTTTCCAATTTAAACTATGGTCAACTATCCGAGAAGAACAAATATGTCGTTTCACGTCTGATAGCAAAGAGAGATTCCGTGGTAATGCTGGAGTTGTTGTGACAACATATAATATGGTTGCTTTTGGTGGTAAGCGGTCTGAAGAATCTGAAAAGATCATTGAAGAAATAAGAAACAGAGAATGGGGATTGCTCCTCATGGATGAGGTGCATGTGGTACCGGCCCATATGTTTCGTAAAGTCATTAGTATCACTAAATCTCATTGTAAACTTGGGCTCACAGCTACACTTGTCAGAGAGGATGAAAGGATTACAGATCTGAACTTCCTGATTGGTCCCAAGCTGTATGAGGCCAATTGGCTAGATCTAGTAAAAGGTGGATTTATTGCAAATGTACAGTGTGCTGAAGTATGGTGTCCGATGACAAAAGAGTTTTTTGCTGAGTATTTGAAGAAAGAGAACTCCAAGAAGAGGCAGGCACTTTACGTAATGAATCCTAATAAGTTCAGAGCGTGTGAGTTTCTCATAAATTTCCATGAAGGGACACGTGGTGATAAAATTATAGTCTTTGCTGATAATCTGTTTGCTCTCACTGAGTATGCCATGAAACTCCGCAAACCAATGATATATGGTGCTACAAGCCATGTTGAGAGAACAAAAATTTTGCAAGCATTCAAAACTAGCAAAGATATAAATACTATATTTCTTTCCAAGGTGGGCGACAACTCAATTGATATTCCTGAAGCAAACGTAATAATTCAGATCTCTTCACATGCTGGTTCAAGGCGACAAGAAGCCCAGCGTCTGGGTCGTATTCTTAGGGCAAAGGGAAAGCTTGAGGATAGGATGGCAGGGGGCAAGGAGGAGTATAATGCATTTTTTTATTCCCTTGTTTCAATTGATACCCAGGAGATGTATTACTCCACTAAGAGGCAGCAATTTTTAATTGATCAGGGTTACAGCTTTAAGGTAATTACTAGCTTGCCTCCTCCTGATGAAGGGCCTAATTTGAGCTATCATCGTCTTGAGGATCAATTGGCACTTCTTGGAAAGGTGTTGAGTGCTGGTGATGATCAAGTTGGATTAGAGCAACTAGATGAAGATGCAGATGAAATTGCCCTTCAGAGTGCCCGTCGCTCTCAAGGATCCATGAGTGCAATGTCAGGTGCAAAAGGGATGGTTTATATGGAGTACAGTACTGTGCGTAAAGGCCAACAAGGACAGATCAAGAGCAAGCCGAAAGATCCAGCGAAGAGACATTTCTTGTTTAAAAGAAGATATGGGGCAACCTAA

>Glyma.08g016400.3 sequence-type=CDS polypeptide=Glyma.08g016400.3.p locus=Glyma.08g016400 id=Glyma.08g016400.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGATACGGTGAAAAAGGAGGACGACCTCCATTCAAAAAGCACAAGGCCTCAACTAAATTCCAGGAAGATCCCCAAAAAGGAATCGCCTACGATGACGATGGTTATGGCGGCGAAGATGCCTACGACGATGACGATGGTAAAACCAAGGATTTTAGCAAATTAGAGCTGAAACCGGATCACACCAATCGCCCTCTGTGGGCTTGTGGCAATGGCCGCATATTCCTGGAGACTTTCTCGCCTTTGTACAAGCATGCTTATGATTTTCTTATCGCCATCGCTGAGCCTGTTTGCAGGCCGGAGTCTATGCACGAATACAACCTTACTCCACACTCGCTGTATGCGGCTGTTTCGGTTGGTCTGGAAACAGAAACAGTCATAAATGTTTTGAACAAGTTATCCAAGACCAAGCTTCCCAAAGAGATGATTAAATTTATACATGATTCTACTGCAAATTATGGCAAAGTGAAACTCGTCCTCAAGAAGAATCGATATTTCATTGAATCTCCATTTCCAGAGGTATTGAAGACATTGCTCAGGGATGAAACTATATCTCGATCAAGGCTTATTTCTGAGAATGTAAATGGAGATGGATTTACCATCAGCAAAGCAGCAGGTGAAATTGAAGGCACTCATGATGAGTTGCTAAATGAAGCAGAAGTTGCAGCGGTTGCGGAAGAGAAAGAAGCCCATTCATTTGAAATTGATCCTTCTCAGGTTGAAAATGTAAAGCAACGATGCTTGCCAAATGCGTTAAATTATCCCATGTTGGAGGAGTATGACTTCAGAAATGATACTGTGAACCCAGATCTTGACATGGAACTAAAGCCTCAAGCACAACCACGGCCATATCAAGAGAAGAGCCTTAGTAAAATGTTTGGAAATGGTAGAGCAAGATCTGGTATAATAGTTTTACCCTGTGGTGCTGGAAAGTCCTTAGTTGGTGTTTCTGCAGCTTGCCGGATAAAAAAAAGCTGCCTCTGTTTGGCAACAAATGCTGTTTCTGTAGATCAGTGGGCTTTCCAATTTAAACTATGGTCAACTATCCGAGAAGAACAAATATGTCGTTTCACGTCTGATAGCAAAGAGAGATTCCGTGGTAATGCTGGAGTTGTTGTGACAACATATAATATGGTTGCTTTTGGTGGTAAGCGGTCTGAAGAATCTGAAAAGATCATTGAAGAAATAAGAAACAGAGAATGGGGATTGCTCCTCATGGATGAGGTGCATGTGGTACCGGCCCATATGTTTCGTAAAGTCATTAGTATCACTAAATCTCATTGTAAACTTGGGCTCACAGCTACACTTGTCAGAGAGGATGAAAGGATTACAGATCTGAACTTCCTGATTGGTCCCAAGCTGTATGAGGCCAATTGGCTAGATCTAGTAAAAGGTGGATTTATTGCAAATGTACAGTGTGCTGAAGTATGGTGTCCGATGACAAAAGAGTTTTTTGCTGAGTATTTGAAGAAAGAGAACTCCAAGAAGAGGCAGGCACTTTACGTAATGAATCCTAATAAGTTCAGAGCGTGTGAGTTTCTCATAAATTTCCATGAAGGGACACGTGGTGATAAAATTATAGTCTTTGCTGATAATCTGTTTGCTCTCACTGAGTATGCCATGAAACTCCGCAAACCAATGATATATGGTGCTACAAGCCATGTTGAGAGAACAAAAATTTTGCAAGCATTCAAAACTAGCAAAGATATAAATACTATATTTCTTTCCAAGGTGGGCGACAACTCAATTGATATTCCTGAAGCAAACGTAATAATTCAGATCTCTTCACATGCTGGTTCAAGGCGACAAGAAGCCCAGCGTCTGGGTCGTATTCTTAGGGCAAAGGGAAAGCTTGAGGATAGGATGGCAGGGGGCAAGGAGGAGTATAATGCATTTTTTTATTCCCTTGTTTCAATTGATACCCAGGAGATGTATTACTCCACTAAGAGGCAGCAATTTTTAATTGATCAGGGTTACAGCTTTAAGGTAATTACTAGCTTGCCTCCTCCTGATGAAGGGCCTAATTTGAGCTATCATCGTCTTGAGGATCAATTGGCACTTCTTGGAAAGGTGTTGAGTGCTGGTGATGATCAAGTTGGATTAGAGCAACTAGATGAAGATGCAGATGAAATTGCCCTTCAGAGTGCCCGTCGCTCTCAAGGATCCATGAGTGCAATGTCAGGTGCAAAAGGGATGGTTTATATGGAGTACAGTACTGTGCGTAAAGGCCAACAAGGACAGATCAAGAGCAAGCCGAAAGATCCAGCGAAGAGACATTTCTTGTTTAAAAGAAGATATGGGGCAACCTAA
Predicted protein sequences of Glyma.08g016400
>Glyma.08g016400.1.p sequence-type=predicted peptide transcript=Glyma.08g016400.1 locus=Glyma.08g016400 id=Glyma.08g016400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGYGEKGGRPPFKKHKASTKFEDPQKGIAYDDDGYGGEDAYDDDDGKTKDFSKLELKPDHTNRPLWACGNGRIFLETFSPLYKHAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVINVLNKLSKTKLPKEMIKFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISRSRLISENVNGDGFTISKAAGEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKRQALYVMNPNKFRACEFLINFHEGTRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDEGPNLSYHRLEDQLALLGKVLSAGDDQVGLEQLDEDADEIALQSARRSQGSMSAMSGAKGMVYMEYSTVRKGQQGQIKSKPKDPAKRHFLFKRRYGAT*

>Glyma.08g016400.3.p sequence-type=predicted peptide transcript=Glyma.08g016400.3 locus=Glyma.08g016400 id=Glyma.08g016400.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGYGEKGGRPPFKKHKASTKFQEDPQKGIAYDDDGYGGEDAYDDDDGKTKDFSKLELKPDHTNRPLWACGNGRIFLETFSPLYKHAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVINVLNKLSKTKLPKEMIKFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISRSRLISENVNGDGFTISKAAGEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKRQALYVMNPNKFRACEFLINFHEGTRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDEGPNLSYHRLEDQLALLGKVLSAGDDQVGLEQLDEDADEIALQSARRSQGSMSAMSGAKGMVYMEYSTVRKGQQGQIKSKPKDPAKRHFLFKRRYGAT*






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