SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g002400

Feature Type:gene_model
Chromosome:Gm08
Start:172251
stop:176164
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g002400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G09220.1AT AAP2 JGI N/AIEA
KOG1303 KOG Amino acid transporters JGI N/AIEA
PTHR22950PantherFam AMINO ACID TRANSPORTER JGI N/AIEA
PF01490Pfam Transmembrane amino acid transporter protein JGI N/AIEA

Gene model name correspondences to Glyma.08g002400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g00460 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g002400
>Glyma.08g002400.1 sequence-type=CDS polypeptide=Glyma.08g002400.1.p locus=Glyma.08g002400 id=Glyma.08g002400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCTGAGAACCCTGCAGCCACAACCAACCTTCAAGTTTTTGGCATCGAAGATGATCTGCCTTCGCACTCACAGAATAACTCCAAATGCTATGATGATGATGGCCGTCTCAAACGAACTGGAAATGTTTGGACAGCAAGCAGCAGTGATAGGATCAGGGGTGCTTGGGCCATAGCTCAGCTAGGTGGAGCCAATGTTACGTTCTGTGGAATATTTCAGTACCTGAATCTATTGGGAATTGTAATAGGATACACAATTGCCGCTTCTATTAGCATGAGGGCAATCAAAAGGTCAAACTGTTTCCATAAATCTGGGGGCAAAAACCCATGTCACATGCCAAGCAACCTATACATGATAATTTTTGGCGCAACCGAAATGTTTCTTTCTCAAATTCCCGATTTTGATCAAATATGGTGGCTCTCAACAGTTGCTGCAATCATGTCTTTCACCTATTCCATAATTGGTCTCTCTCTTGGAATTGCCAAAGTTGCAGAAACGGGTCCCTTCAAGGGTGGCCTCACTGGAGTCAGCATTGGACCAGTGTCAGAGACCCAAAAAATATGGAGGACTTCCCAAGCTCTTGGTGACATAGCCTTTGCCTATTCGTATGCTGTGGTTCTCATAGAAATTCAGGACACCATAAAATCTCCACCATCTGAAGCAGAAACAATGAAGAAGGCCACATTGATAAGTATTGCAGTGACCACAACATTTTACATGCTCTGTGGCTGCATGGGGTATGCTGCTTTTGGAGATGCTGCACCTGGGAATCTGCTCACTGGCTTTGGCTTCTATAACCCATATTGGCTTATAGACATTGCAAATGCTGCTATAGTAATTCACCTTGTGGGAGCATACCAAGTGTTTTCCCAACCCATCTTTGCCTTTGTGGAGAAAGAGGTAACACAAAGATGGCCCAACTTTAACAGGGAGTTCAAGATTCCAATTCCTGGTTTCTCCCCATACAAACTAAAGGTGTTTAGATTAGTTTTGAGGACAGTGTTTGTTGTCCTAACAACTGTGATATCAATGTTGCTTCCATTCTTCAATGACATTGTTGGAGTGATTGGGGCATTGGGATTTTGGCCATTAACAGTTTACTTTCCTGTGGAGATGTATATTTCACAGAAGAAGATACCAAAATGGAGTAACAGATGGATTAGTCTCAAAATATTTAGCATGGCCTGCCTCATAGTATCAGTTGTTGCTGCTGTTGGCTCAGTGGCAGGAGTCTTGCTTGACCTTAAGAAATACAAACCATTCCACTCAAACTATTAA

>Glyma.08g002400.2 sequence-type=CDS polypeptide=Glyma.08g002400.2.p locus=Glyma.08g002400 id=Glyma.08g002400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATCATTAATGGGTTTGATTCTGTTTCGTTGATTTTGATTGACAGGGCAATCAAAAGGTCAAACTGTTTCCATAAATCTGGGGGCAAAAACCCATGTCACATGCCAAGCAACCTATACATGATAATTTTTGGCGCAACCGAAATGTTTCTTTCTCAAATTCCCGATTTTGATCAAATATGGTGGCTCTCAACAGTTGCTGCAATCATGTCTTTCACCTATTCCATAATTGGTCTCTCTCTTGGAATTGCCAAAGTTGCAGAAACGGGTCCCTTCAAGGGTGGCCTCACTGGAGTCAGCATTGGACCAGTGTCAGAGACCCAAAAAATATGGAGGACTTCCCAAGCTCTTGGTGACATAGCCTTTGCCTATTCGTATGCTGTGGTTCTCATAGAAATTCAGGACACCATAAAATCTCCACCATCTGAAGCAGAAACAATGAAGAAGGCCACATTGATAAGTATTGCAGTGACCACAACATTTTACATGCTCTGTGGCTGCATGGGGTATGCTGCTTTTGGAGATGCTGCACCTGGGAATCTGCTCACTGGCTTTGGCTTCTATAACCCATATTGGCTTATAGACATTGCAAATGCTGCTATAGTAATTCACCTTGTGGGAGCATACCAAGTGTTTTCCCAACCCATCTTTGCCTTTGTGGAGAAAGAGGTAACACAAAGATGGCCCAACTTTAACAGGGAGTTCAAGATTCCAATTCCTGGTTTCTCCCCATACAAACTAAAGGTGTTTAGATTAGTTTTGAGGACAGTGTTTGTTGTCCTAACAACTGTGATATCAATGTTGCTTCCATTCTTCAATGACATTGTTGGAGTGATTGGGGCATTGGGATTTTGGCCATTAACAGTTTACTTTCCTGTGGAGATGTATATTTCACAGAAGAAGATACCAAAATGGAGTAACAGATGGATTAGTCTCAAAATATTTAGCATGGCCTGCCTCATAGTATCAGTTGTTGCTGCTGTTGGCTCAGTGGCAGGAGTCTTGCTTGACCTTAAGAAATACAAACCATTCCACTCAAACTATTAA
Predicted protein sequences of Glyma.08g002400
>Glyma.08g002400.1.p sequence-type=predicted peptide transcript=Glyma.08g002400.1 locus=Glyma.08g002400 id=Glyma.08g002400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPENPAATTNLQVFGIEDDLPSHSQNNSKCYDDDGRLKRTGNVWTASSSDRIRGAWAIAQLGGANVTFCGIFQYLNLLGIVIGYTIAASISMRAIKRSNCFHKSGGKNPCHMPSNLYMIIFGATEMFLSQIPDFDQIWWLSTVAAIMSFTYSIIGLSLGIAKVAETGPFKGGLTGVSIGPVSETQKIWRTSQALGDIAFAYSYAVVLIEIQDTIKSPPSEAETMKKATLISIAVTTTFYMLCGCMGYAAFGDAAPGNLLTGFGFYNPYWLIDIANAAIVIHLVGAYQVFSQPIFAFVEKEVTQRWPNFNREFKIPIPGFSPYKLKVFRLVLRTVFVVLTTVISMLLPFFNDIVGVIGALGFWPLTVYFPVEMYISQKKIPKWSNRWISLKIFSMACLIVSVVAAVGSVAGVLLDLKKYKPFHSNY*

>Glyma.08g002400.2.p sequence-type=predicted peptide transcript=Glyma.08g002400.2 locus=Glyma.08g002400 id=Glyma.08g002400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MIINGFDSVSLILIDRAIKRSNCFHKSGGKNPCHMPSNLYMIIFGATEMFLSQIPDFDQIWWLSTVAAIMSFTYSIIGLSLGIAKVAETGPFKGGLTGVSIGPVSETQKIWRTSQALGDIAFAYSYAVVLIEIQDTIKSPPSEAETMKKATLISIAVTTTFYMLCGCMGYAAFGDAAPGNLLTGFGFYNPYWLIDIANAAIVIHLVGAYQVFSQPIFAFVEKEVTQRWPNFNREFKIPIPGFSPYKLKVFRLVLRTVFVVLTTVISMLLPFFNDIVGVIGALGFWPLTVYFPVEMYISQKKIPKWSNRWISLKIFSMACLIVSVVAAVGSVAGVLLDLKKYKPFHSNY*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo