SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.08g002100

Feature Type:gene_model
Chromosome:Gm08
Start:141748
stop:148834
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.08g002100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G52430.1AT ATPAD4,PAD4 JGI N/AIEA
3.1.1.1EC carboxylesterase JGI N/AIEA
GO:0006629GO-bp lipid metabolic process JGI N/AIEA
PTHR21493PantherFam CGI-141-RELATED/LIPASE CONTAINING PROTEIN JGI N/AIEA
PF01764Pfam Lipase (class 3) JGI N/AIEA

Proteins Associated with Glyma.08g002100
LocusGene SymbolProtein Name
PAD4 uncharacterized LOC100788725
PAD4 phytoalexin deficient 4

Gene model name correspondences to Glyma.08g002100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma08g00420 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.08g002100
>Glyma.08g002100.1 sequence-type=CDS polypeptide=Glyma.08g002100.1.p locus=Glyma.08g002100 id=Glyma.08g002100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCGCATGGCTTCCAACGAAACTTCACCGTTTGAGTCTCGCGAGATGCTCGCATCCTTCGTCTCGTCCACGCCCCTGCTGTCGGACTCATGGCGCCTCTGCACCCAGGCCAACGCCACTCCCTTCCTGACCTTCGTGACTGAGCGTGTCGGCGCCTCCGTGTATGTGGCTTTCTCCGGCGTCCATATGGCCGGCGAGTCCGACCCGAACTGGAGAAATTTGACTCCTTTGTACAGCATCGGCGGCCTGCCTCTGTTTTCGTCTCGGCGGAGCAAGGAATGGGAGGAACCGGTCATGGTTCATGCTGGCATCCTCAATCTCTTCTTTTCACTTTTCAATTCTTTCCAGAACCAGATGTTGGAAATAGTGGGAAACAAAGACACTAAATCAGTTGTCATCACTGGCCATTCCATTGGAGGAGCCACTGCTTCTTTGTGCACTCTTTGGCTTCTGTCTTACCTCCAATCCATCTCTTCATCTGTGTCAATATTGTGCATCACTTATGGGGCACCGTTGATTGGGAACGAGTCCTTTTCCCAAACCATTTTCAAAGAAAGATGGGGTGGCAACTTCTGCCACGTGGTGTCAAAGCATGACATAATGCCAAGGTTGCTCTTTGCCCCTATAACCTCTCTCTCTACCCAGCTAAATTCCCTGCTACAGTTTTGGCACTTGTCCATGACTTCACCAGATTTTGGGAAGCTTGCAAATCAGATATCTGAAAAAGAGAAAGATAAGTTGTTCACTGCTGTAATGGATTACTTGGAAGCAGCAACACAAGATGGAGAAAAATCAGCGCCAATTTTGTTTCACCCTTTTGGGAGCTACTTTTTTGTCTCAGAAGAAGGAGCAGTGTGTGTGGATAGTCCATCCGCTATTATAAAGATGATGCACTTGATGCTTGCAACTAGTTCTCCAGCTAGTAGTATTGAGGACCATCTGAAGTACGGAGATTATGTTAATAAAATGTCTGCACAAACATTGTATCAGAGCAACTCCATGCAAAAGAACATCCCTGACTCAAGCTATGAAGCAGGGCTTGAATTGGCCATTCAGTCCTCTGGCATAGCAAACCAGGAACCAGCTATTACATCCGCCAAGGAATGTCTGAAGACAACAAGGAGAATGGGTCCTTCACCAACCCTGAATGCTGCAAGCCTGGCAGTTAGCTTATCCAAGGTGGTACCTTATAGAGCGCAAATAGAATGGTACAAGACTTGGTGCGATGAGCAAGACGACCAAATGGGTTATTACGACTCATTCAAAAGCAGGGACTCTTCCAGTTCCAAAAGGGACATGAAAATCAACATCAACCGTTGCAAGCTTGCCAGGTTTTGGAACAACGTTATTGACATGTTGGAAAGGGGAGAGCTACCTCATGATTTTGACAAGAGAGCCAAGTGGGTGAATACTTCACACTTCTATAAGCTATTGGTTGAGCCACTAGACATTGCTGAATATTATGGGAAGGGGATGCATAGAACCAAGGGCCATTACATGCAGCATGGTAGAGAGAGAAGATATGAGATTTTTGATAGGTGGTGGAAGGATAAAACGGTTACTACTGGTAGAGAAGAAAACAAGGAGAGGAGCAAATTTGCTAGTTTGACCCAAGATTCATGCTTTTGGGCCAGAGTGGAGGAAGCAAGGGACTGGTTGAATTGTGTTAGAAGCGAGAGAGACACTAACAAGTTGGCTCTATTGTGGGATAAGATTGAAAATTTTGAGAAATATGCCATAGATTTAATTGAAAATAAGGAAGTGTCTGGTGATGTTCTCTTTAAGAATTCAAGTTACAGTATATGGGTGGAGGATTTAAGAGAATTGAAACAACTGAAAGCTAAGGTGCAAAGGTTTCCTCGTCAGTTTACCGGTTTTCTAGATGGGGAAGTAGTTCCTTAG

>Glyma.08g002100.2 sequence-type=CDS polypeptide=Glyma.08g002100.2.p locus=Glyma.08g002100 id=Glyma.08g002100.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTCGCATCCTTCGTCTCGTCCACGCCCCTGCTGTCGGACTCATGGCGCCTCTGCACCCAGGCCAACGCCACTCCCTTCCTGACCTTCGTGACTGAGCGTGTCGGCGCCTCCGTGTATGTGGCTTTCTCCGGCGTCCATATGGCCGGCGAGTCCGACCCGAACTGGAGAAATTTGACTCCTTTGTACAGCATCGGCGGCCTGCCTCTGTTTTCGTCTCGGCGGAGCAAGGAATGGGAGGAACCGGTCATGGTTCATGCTGGCATCCTCAATCTCTTCTTTTCACTTTTCAATTCTTTCCAGAACCAGATGTTGGAAATAGTGGGAAACAAAGACACTAAATCAGTTGTCATCACTGGCCATTCCATTGGAGGAGCCACTGCTTCTTTGTGCACTCTTTGGCTTCTGTCTTACCTCCAATCCATCTCTTCATCTGTGTCAATATTGTGCATCACTTATGGGGCACCGTTGATTGGGAACGAGTCCTTTTCCCAAACCATTTTCAAAGAAAGATGGGGTGGCAACTTCTGCCACGTGGTGTCAAAGCATGACATAATGCCAAGGTTGCTCTTTGCCCCTATAACCTCTCTCTCTACCCAGCTAAATTCCCTGCTACAGTTTTGGCACTTGTCCATGACTTCACCAGATTTTGGGAAGCTTGCAAATCAGATATCTGAAAAAGAGAAAGATAAGTTGTTCACTGCTGTAATGGATTACTTGGAAGCAGCAACACAAGATGGAGAAAAATCAGCGCCAATTTTGTTTCACCCTTTTGGGAGCTACTTTTTTGTCTCAGAAGAAGGAGCAGTGTGTGTGGATAGTCCATCCGCTATTATAAAGATGATGCACTTGATGCTTGCAACTAGTTCTCCAGCTAGTAGTATTGAGGACCATCTGAAGTACGGAGATTATGTTAATAAAATGTCTGCACAAACATTGTATCAGAGCAACTCCATGCAAAAGAACATCCCTGACTCAAGCTATGAAGCAGGGCTTGAATTGGCCATTCAGTCCTCTGGCATAGCAAACCAGGAACCAGCTATTACATCCGCCAAGGAATGTCTGAAGACAACAAGGAGAATGGGTCCTTCACCAACCCTGAATGCTGCAAGCCTGGCAGTTAGCTTATCCAAGGTGGTACCTTATAGAGCGCAAATAGAATGGTACAAGACTTGGTGCGATGAGCAAGACGACCAAATGGGTTATTACGACTCATTCAAAAGCAGGGACTCTTCCAGTTCCAAAAGGGACATGAAAATCAACATCAACCGTTGCAAGCTTGCCAGGTTTTGGAACAACGTTATTGACATGTTGGAAAGGGGAGAGCTACCTCATGATTTTGACAAGAGAGCCAAGTGGGTGAATACTTCACACTTCTATAAGCTATTGGTTGAGCCACTAGACATTGCTGAATATTATGGGAAGGGGATGCATAGAACCAAGGGCCATTACATGCAGCATGGTAGAGAGAGAAGATATGAGATTTTTGATAGGTGGTGGAAGGATAAAACGGTTACTACTGGTAGAGAAGAAAACAAGGAGAGGAGCAAATTTGCTAGTTTGACCCAAGATTCATGCTTTTGGGCCAGAGTGGAGGAAGCAAGGGACTGGTTGAATTGTGTTAGAAGCGAGAGAGACACTAACAAGTTGGCTCTATTGTGGGATAAGATTGAAAATTTTGAGAAATATGCCATAGATTTAATTGAAAATAAGGAAGTGTCTGGTGATGTTCTCTTTAAGAATTCAAGTTACAGTATATGGGTGGAGGATTTAAGAGAATTGAAACAACTGAAAGCTAAGGTGCAAAGGTTTCCTCGTCAGTTTACCGGTTTTCTAGATGGGGAAGTAGTTCCTTAG
Predicted protein sequences of Glyma.08g002100
>Glyma.08g002100.1.p sequence-type=predicted peptide transcript=Glyma.08g002100.1 locus=Glyma.08g002100 id=Glyma.08g002100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MRMASNETSPFESREMLASFVSSTPLLSDSWRLCTQANATPFLTFVTERVGASVYVAFSGVHMAGESDPNWRNLTPLYSIGGLPLFSSRRSKEWEEPVMVHAGILNLFFSLFNSFQNQMLEIVGNKDTKSVVITGHSIGGATASLCTLWLLSYLQSISSSVSILCITYGAPLIGNESFSQTIFKERWGGNFCHVVSKHDIMPRLLFAPITSLSTQLNSLLQFWHLSMTSPDFGKLANQISEKEKDKLFTAVMDYLEAATQDGEKSAPILFHPFGSYFFVSEEGAVCVDSPSAIIKMMHLMLATSSPASSIEDHLKYGDYVNKMSAQTLYQSNSMQKNIPDSSYEAGLELAIQSSGIANQEPAITSAKECLKTTRRMGPSPTLNAASLAVSLSKVVPYRAQIEWYKTWCDEQDDQMGYYDSFKSRDSSSSKRDMKININRCKLARFWNNVIDMLERGELPHDFDKRAKWVNTSHFYKLLVEPLDIAEYYGKGMHRTKGHYMQHGRERRYEIFDRWWKDKTVTTGREENKERSKFASLTQDSCFWARVEEARDWLNCVRSERDTNKLALLWDKIENFEKYAIDLIENKEVSGDVLFKNSSYSIWVEDLRELKQLKAKVQRFPRQFTGFLDGEVVP*

>Glyma.08g002100.2.p sequence-type=predicted peptide transcript=Glyma.08g002100.2 locus=Glyma.08g002100 id=Glyma.08g002100.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLASFVSSTPLLSDSWRLCTQANATPFLTFVTERVGASVYVAFSGVHMAGESDPNWRNLTPLYSIGGLPLFSSRRSKEWEEPVMVHAGILNLFFSLFNSFQNQMLEIVGNKDTKSVVITGHSIGGATASLCTLWLLSYLQSISSSVSILCITYGAPLIGNESFSQTIFKERWGGNFCHVVSKHDIMPRLLFAPITSLSTQLNSLLQFWHLSMTSPDFGKLANQISEKEKDKLFTAVMDYLEAATQDGEKSAPILFHPFGSYFFVSEEGAVCVDSPSAIIKMMHLMLATSSPASSIEDHLKYGDYVNKMSAQTLYQSNSMQKNIPDSSYEAGLELAIQSSGIANQEPAITSAKECLKTTRRMGPSPTLNAASLAVSLSKVVPYRAQIEWYKTWCDEQDDQMGYYDSFKSRDSSSSKRDMKININRCKLARFWNNVIDMLERGELPHDFDKRAKWVNTSHFYKLLVEPLDIAEYYGKGMHRTKGHYMQHGRERRYEIFDRWWKDKTVTTGREENKERSKFASLTQDSCFWARVEEARDWLNCVRSERDTNKLALLWDKIENFEKYAIDLIENKEVSGDVLFKNSSYSIWVEDLRELKQLKAKVQRFPRQFTGFLDGEVVP*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo