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Report for Sequence Feature Glyma.08G252100

Feature Type:gene_model
Chromosome:Gm08
Start:22112310
stop:22118088
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.08G252100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G01140.3AT CBL-interacting protein kinase 9 JGI N/AIEA
GO:0006468GO-bp protein phosphorylation EnsemblGenomesN/AIEA
GO:0006468GO-bp protein phosphorylation JGI N/AIEA
GO:0007165GO-bp signal transduction EnsemblGenomesN/AIEA
GO:0007165GO-bp signal transduction JGI N/AIEA
GO:0016310GO-bp phosphorylation EnsemblGenomesN/AIEA
GO:0035556GO-bp intracellular signal transduction EnsemblGenomesN/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0000166GO-mf nucleotide binding EnsemblGenomesN/AIEA
GO:0004672GO-mf protein kinase activity EnsemblGenomesN/AIEA
GO:0004672GO-mf protein kinase activity JGI N/AIEA
GO:0004674GO-mf protein serine/threonine kinase activity EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
GO:0016301GO-mf kinase activity EnsemblGenomesN/AIEA
GO:0016740GO-mf transferase activity EnsemblGenomesN/AIEA
PTHR24345Panther SERINE/THREONINE-PROTEIN KINASE PLK JGI N/AIEA
PTHR24345:SF45Panther JGI N/AIEA
PF00069PFAM Protein kinase domain JGI N/AIEA
PF03822PFAM NAF domain JGI N/AIEA
PF08670PFAM MEKHLA domain JGI N/AIEA

Expression Patterns of Glyma.08G252100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.08G252100 not represented in the dataset
Glyma.08G252100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.



Coding sequences of Glyma.08G252100
>Glyma.08g252100.1 sequence-type=CDS polypeptide=Glyma.08g252100.1.p locus=Glyma.08g252100 ID=Glyma.08g252100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTATCTTACTTCACTCTTCCATGCATCAATAGGCAACTTGAAAGTTGAACCAGAGAATCTTCTTCTGGACTTAAATGGTGTTCTGAAAGTTACAGATTTTGGATTGAGTACATATGCGCAACAGGAGGATGAACTTCTTCGAACTGCTTGTGGAATTCCAAATTATGTTGCTCCTGAGGTGCTTAATGATAGAGGTTATGTTGGTTCTACATCTGATATCTGGTTATGTGGAGTCATCCTCTTTGTGCTTATGGCCGGGTATTTGCCCTTTGTTGAGCCAAATCATGCGAAACTGTACAAAAAAATTGGCAGGGCCCAATTTACATGTCCATCATGGTTTTCTCCTAAGGCAAAGAAACTATTGAAGCTTATTCTTGATCCAAACCCTCTAACAAGGATAAAAGTTCCTGAACTTTTAAAAGATGAATGGTTCAAAAAAGGATACAAACAAACAACTTTTATAATGGAAGAGGATATCAATGTAGATGATGTTGCTGCTGCTTTCAATGATTCTAAGGAAAATCTTGTGACGGAGAGAAAAGAGAAACCAGTGTCAATGAATGCTTTTGAGCACATATCTAGGTCACAAAGCTTCAACCTTGAAAATTTGTTTGAGAAGCAGCAAGGGTCTGTTAAGAGAGAAACACATTTTACCTCACAGCGCCCTACAAATGAAATCATGTCAAAAATTGAGGAAGTTGCCAAGCCTCTGGGATTTAATGTTCACAAGCGAAATTATAAGCATCAACACTGTAATGCCCACTCAGCTGGTGAAAGTGACTTGAATGACTACAACCTTAGGTTGGTCCTCACAATTGCATTCCAATTTACCTTTGAGAACCATTTGCGGGACAATGTGACTGTTATGGCTCGCCAGCATGTGCATAATGTTGTGCGATCTATTCAGAGGGTTGCCATGGCAATTGCTCCCTCTAGGCTCAGTTCACAGTTGGGGTCAAAGTCACTTCCTGGTCCACCCGAGGCTCTTACCTTAGCGAGATGGATCTGCAAAAGCTACAGGTTTGCATTCTTCCGTAAGTCTATTTTTGTTATGATTAATGTAGTTTCCTCAATCATTTTATATCCTTGTCTTCAAGGTTATTTAAAGCTCAGTTTCAGATACAAATTGCACAAATTTTACAATCTTATTTCCTGTGTTTGGTATGATATAGTAAAGATTGTTTCTTTCAGGCTCCACACCTGGACAGAGCTTTTCAGCGTTGAGTCTACATCCGGTGATGCAATCTTGAAACAAGTTTGGCACCATCCAGATGCAGTATTGTGTTGTTCTGTAAAAACAGATGTAAATCACTTGCTGCCTCTATATAATCCTAATCTGCCTCAATTTTTATTTATTTTCCAAAATTTTCTTGTTTTTAGTCCAATAAACTCTATCAAGTAA
Predicted protein sequences of Glyma.08G252100
>Glyma.08g252100.1.p sequence-type=predicted peptide transcript=Glyma.08g252100.1 locus=Glyma.08g252100 ID=Glyma.08g252100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MYLTSLFHASIGNLKVEPENLLLDLNGVLKVTDFGLSTYAQQEDELLRTACGIPNYVAPEVLNDRGYVGSTSDIWLCGVILFVLMAGYLPFVEPNHAKLYKKIGRAQFTCPSWFSPKAKKLLKLILDPNPLTRIKVPELLKDEWFKKGYKQTTFIMEEDINVDDVAAAFNDSKENLVTERKEKPVSMNAFEHISRSQSFNLENLFEKQQGSVKRETHFTSQRPTNEIMSKIEEVAKPLGFNVHKRNYKHQHCNAHSAGESDLNDYNLRLVLTIAFQFTFENHLRDNVTVMARQHVHNVVRSIQRVAMAIAPSRLSSQLGSKSLPGPPEALTLARWICKSYRFAFFRKSIFVMINVVSSIILYPCLQGYLKLSFRYKLHKFYNLISCVWYDIVKIVSFRLHTWTELFSVESTSGDAILKQVWHHPDAVLCCSVKTDVNHLLPLYNPNLPQFLFIFQNFLVFSPINSIK*






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