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Report for Sequence Feature Glyma.08G079000

Feature Type:gene_model
Chromosome:Gm08
Start:6018699
stop:6019989
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.08G079000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G19940.1AT oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0003942GO-mf N-acetyl-gamma-glutamyl-phosphate reductase activity EnsemblGenomesN/AIEA
ARGSYN-PWYSoyCyc9 L-arginine biosynthesis I (via L-ornithine) Plant Metabolic Network ISS
ARGSYNBSUB-PWYSoyCyc9 L-arginine biosynthesis II (acetyl cycle) Plant Metabolic Network ISS
GLUTORN-PWYSoyCyc9 L-ornithine biosynthesis I Plant Metabolic Network ISS
GN7V-64592SoyCyc9-rxn N-acetyl-γ-glutamyl-phosphate reductase Plant Metabolic Network ISS

Expression Patterns of Glyma.08G079000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.08G079000 not represented in the dataset
Glyma.08G079000 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.08G079000 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.08g079000 Wm82.a4.v1ISS As supplied by JGI


Coding sequences of Glyma.08G079000
>Glyma.08g079000.1 sequence-type=CDS polypeptide=Glyma.08g079000.1.p locus=Glyma.08g079000 ID=Glyma.08g079000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGAGTGGTATGGTCAGTAGCATAGAGCACCAGATTTGCAGAAAGAAGCTATATATGTATGGATTGACAGAGGTTTTAAGGGAGGAAATAAAGAATTCACATCTAGTTGCTAATCCAGGTTGTTATCCAACTTCTGTTGAACTTCCTCTTGTCCCATTGATAAAGATTGGGTTGATTCATTCTCTATATTTTTCATTCACTCAAGGTATTCCTCATTAG
Predicted protein sequences of Glyma.08G079000
>Glyma.08g079000.1.p sequence-type=predicted peptide transcript=Glyma.08g079000.1 locus=Glyma.08g079000 ID=Glyma.08g079000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKSGMVSSIEHQICRKKLYMYGLTEVLREEIKNSHLVANPGCYPTSVELPLVPLIKIGLIHSLYFSFTQGIPH*






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