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Report for Sequence Feature Glyma.07g263800

Feature Type:gene_model
Chromosome:Gm07
Start:43819736
stop:43826175
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.07g263800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G12000.1AT Phosphofructokinase family protein JGI N/AIEA
GO:0006002GO-bp fructose 6-phosphate metabolic process EnsemblGenomesN/AIEA
GO:0006096GO-bp glycolytic process EnsemblGenomesN/AIEA
GO:0006096GO-bp glycolysis JGI N/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0016310GO-bp phosphorylation EnsemblGenomesN/AIEA
GO:0046835GO-bp carbohydrate phosphorylation EnsemblGenomesN/AIEA
GO:0061615GO-bp glycolytic process through fructose-6-phosphate EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0005945GO-cc 6-phosphofructokinase complex JGI N/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
GO:0003872GO-mf 6-phosphofructokinase activity EnsemblGenomesN/AIEA
GO:0003872GO-mf 6-phosphofructokinase activity JGI N/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0016301GO-mf kinase activity EnsemblGenomesN/AIEA
GO:0016740GO-mf transferase activity EnsemblGenomesN/AIEA
GO:0046872GO-mf metal ion binding EnsemblGenomesN/AIEA
GO:0047334GO-mf diphosphate-fructose-6-phosphate 1-phosphotransferase activity EnsemblGenomesN/AIEA
KOG2440 KOG Pyrophosphate-dependent phosphofructo-1-kinase JGI N/AIEA
PTHR13697Panther PHOSPHOFRUCTOKINASE JGI N/AIEA
PF00365PFAM Phosphofructokinase JGI N/AIEA
PWY-1042SoyCyc9 glycolysis IV (plant cytosol) Plant Metabolic Network ISS
PWY-5464SoyCyc9 superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle Plant Metabolic Network ISS
GN7V-44369SoyCyc9-rxn diphosphate-fructose-6-phosphate 1-phosphotransferase Plant Metabolic Network ISS

Expression Patterns of Glyma.07g263800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.07g263800
ParalogEvidenceComments
Glyma.17g010100 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.07g263800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma07g39380 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.07g263800
>Glyma.07g263800.2 sequence-type=transcript locus=Glyma.07g263800 ID=Glyma.07g263800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGGTTACGAAAGAATAGGCTGATGCTTCTATTAACAGCGTAATATCGTATCTTTTTTTCGGTTAATCGTAATATCGTATCAAATCACATAGTTAGATAGCCAGTCATCTTTTTACGCAAAACGATAACGATAATAATAGTATAGTTTGGTAAGCCTAATTTTTTTATTTAAGAGTTAAAGTTAGGTAAGCGCTTGATTTTGCATTTTGCACTGATCACTTCACACAGTAACTTGGACACCAACTCACTCTCTCACCAACAAAACAAAATCCAATGGCGCCGTCTTTCGCAATCAACGGTGGTTTCCCCGGCGCCAGAGTCACTCCTCCTTCCGTCACCGGCCGCTTCGCCGCCGTCTACAGCGAGGTCCAAAACAGCCGCATCGACCACGAACTCCCTCTCCCCTCCGTTCTCAAAAACCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTGAGGAGATCGCGAAGCTGTTCCCGAAACTGTTCGGGCAACCGTCGGCGGCTTTGGTGCCGAGTGATTCCCACGCGCCGCATGCAAATCGGAAGCTGAAGATTGGCGTGGTTCTGTCCGGTGGCCAGGCTCCCGGCGGTCACAATGTTATTTCTGGAATCTTCGattACCTGCAAGACCTTGCAGAAGGAAGCACATTGTATGGTTTCAGGGGTGGTCCAGCTGGCATCATGAAGTGCAAATACGTTGAACTTACCTCAGACTATATTTATCCTTACAGAAATCAGGGTGGTTTTGACATGATTCGCAGTGGGAGGGACAAGATTGAAACTCCAGAGCAGTTTAAACAAGCTGAAGAAACAGTGCAGAAGCTAAACTTGGACGGCCTTGTTGTTATTGGTGGAGATGACTCAAACACAAATGCATGCCTCCTTGCTGAGCATTTCAGGAGTAAAAATATGAAAACTCGTGTGATTGGGTGCCCTAAAACCATTGATGGTGATTTGAAATGCAAAGAAGTTCCCACAAGTTTTGGGTTTGATACAGCATGCAAGATATATGCAGAAATGATTGGCAATGTTATGATAGATGCTCGATCAACTGGAAAATATTACCATTTTGTTCGGCTTATGGGACGTGCAGCTTCGCACATTACACTGGAATGTGCTTTGCAAACTCATCCAAACATTACTATTATTGGAGAAGAGGTTGCTGCCAAGAAGATGACACTGAAGGATGTCACTGACTACATTGTTAATATCATTTCTAAAAGAGCTGAGGATAATTATAACTATGGGGTCATTCTTATCCCTGAAGGTCTAATTGATTTTATTCCTGAGGTCCAACACCTTATTGCAGAACTCAATGAAATTCTGGCAAATGACGCTGTGGATGAGGGAGGGCTATGGAAGAAGAAACTCACCGATCAGTCATTAAAGCTTTTTGAATTTTTACCTAAAGCAATTCAAGAACAATTAATGCTTGAAAGAGATCCGCATGGAAATGTTCAGGTTGCCAAGATAGAAACAGAGAAAATGCTTATTCAAATGGTTGAAACTGAGTTGGAGAAGAGAAAGCAACAGGGCACATATAAAGGAGGATTTAGGGGGCAGTCCCACTTTTTCGGCTATGAAGGGAGATGTGGCTTGCCAACTAATTTTGATTCTACTTACTGCTATGCATTGGGTTATGGTGCTGCAGCCCTCCTTCAAAGTGGGAAGACTGGATTAATATCATCGGTTGGTAATTTATGTGCTCCTGTAGAAGAATGGACTGTTGGTGGAACTGCACTCACTTCATTGATGGACGTGGAGAGGAGACATGGTAAATTCAAGCCTGTGATCAAGAAGGCAATGGTGGAGCTTGAAGGGGCACCCTTCAAAAAGTTTGCCTCCTTGAGGGATGAGTGGGCCCTAAAAAATTGCTACATTAGTCCAGGTATGCATTGACTGTTCCTGCACTCTTTGTTTCTTCTGTCTGCCCCTAAGTCTTGCTCCTCTCTTTAGTTTTTAAACTGTGTTGTCGTCTATGTTAGCTAGAAATCAAATATAAGTTGGAATTTCTTTTAATGTTTTAACTGGAGTAACGTCCTGATGATGATCTTTACTGTAGGTCCAATTCAATTCACTGGCCCAGGATCTGATGCAATTAATCACACTTTACTCTTGGAGCTTGGTGCACAAGCTTAAGACATTCTGAAGCCTTTTTGATGGTGGCAATTCATGTTTTTTGGGAACTACTACAAATATAATAGACCGGAGATTAGTCAAGTGATTGTGTTTTTCACTTTGGAACTTTGCTAGAGAATAGTTTATGCTTTATCAACATCATCGACTTATATTTATGTTTTGGGAATATGTCGTTCCATGATCTTTTAGTTCAATGTTTAATCGTCTCGTCATTTAGGTACGGTAATAGTGATGTAAATAGGAGGTTGAGACATGAGTACCTGAGTGAGAAAATTTTAAGGTGGATTGTGTTTGCATAAGATATGGAAAACCAAATGGTCCTGTTTCAGTGCTTTGTATATTGGAACTCTGCGAGGTTGACCACGGTAACCACAGTAACGAGTAATGTTTCTCGCAATTTACTCGTTCTTTTGTCCATATAGCTAACAACTAGATTTTTGTAAGAGTTTTGAAAAGTT
Coding sequences of Glyma.07g263800
>Glyma.07g263800.1 sequence-type=CDS polypeptide=Glyma.07g263800.1.p locus=Glyma.07g263800 ID=Glyma.07g263800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGCCGTCTTTCGCAATCAACGGTGGTTTCCCCGGCGCCAGAGTCACTCCTCCTTCCGTCACCGGCCGCTTCGCCGCCGTCTACAGCGAGGTCCAAAACAGCCGCATCGACCACGAACTCCCTCTCCCCTCCGTTCTCAAAAACCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTGAGGAGATCGCGAAGCTGTTCCCGAAACTGTTCGGGCAACCGTCGGCGGCTTTGGTGCCGAGTGATTCCCACGCGCCGCATGCAAATCGGAAGCTGAAGATTGGCGTGGTTCTGTCCGGTGGCCAGGCTCCCGGCGGTCACAATGTTATTTCTGGAATCTTCGATTACCTGCAAGACCTTGCAGAAGGAAGCACATTGTATGGTTTCAGGGGTGGTCCAGCTGGCATCATGAAGTGCAAATACGTTGAACTTACCTCAGACTATATTTATCCTTACAGAAATCAGGGTGGTTTTGACATGATTCGCAGTGGGAGGGACAAGATTGAAACTCCAGAGCAGTTTAAACAAGCTGAAGAAACAGTGCAGAAGCTAAACTTGGACGGCCTTGTTGTTATTGGTGGAGATGACTCAAACACAAATGCATGCCTCCTTGCTGAGCATTTCAGGAGTAAAAATATGAAAACTCGTGTGATTGGGTGCCCTAAAACCATTGATGGTGATTTGAAATGCAAAGAAGTTCCCACAAGTTTTGGGTTTGATACAGCATGCAAGATATATGCAGAAATGATTGGCAATGTTATGATAGATGCTCGATCAACTGGAAAATATTACCATTTTGTTCGGCTTATGGGACGTGCAGCTTCGCACATTACACTGGAATGTGCTTTGCAAACTCATCCAAACATTACTATTATTGGAGAAGAGGTTGCTGCCAAGAAGATGACACTGAAGGATGTCACTGACTACATTGTTAATATCATTTCTAAAAGAGCTGAGGATAATTATAACTATGGGGTCATTCTTATCCCTGAAGGTCTAATTGATTTTATTCCTGAGGTCCAACACCTTATTGCAGAACTCAATGAAATTCTGGCAAATGACGCTGTGGATGAGGGAGGGCTATGGAAGAAGAAACTCACCGATCAGTCATTAAAGCTTTTTGAATTTTTACCTAAAGCAATTCAAGAACAATTAATGCTTGAAAGAGATCCGCATGGAAATGTTCAGGTTGCCAAGATAGAAACAGAGAAAATGCTTATTCAAATGGTTGAAACTGAGTTGGAGAAGAGAAAGCAACAGGGCACATATAAAGGAGGATTTAGGGGGCAGTCCCACTTTTTCGGCTATGAAGGGAGATGTGGCTTGCCAACTAATTTTGATTCTACTTACTGCTATGCATTGGGTTATGGTGCTGCAGCCCTCCTTCAAAGTGGGAAGACTGGATTAATATCATCGGTTGGTAATTTATGTGCTCCTGTAGAAGAATGGACTGTTGGTGGAACTGCACTCACTTCATTGATGGACGTGGAGAGGAGACATGGTAAATTCAAGCCTGTGATCAAGAAGGCAATGGTGGAGCTTGAAGGGGCACCCTTCAAAAAGTTTGCCTCCTTGAGGGATGAGTGGGCCCTAAAAAATTGCTACATTAGTCCAGGTCCAATTCAATTCACTGGCCCAGGATCTGATGCAATTAATCACACTTTACTCTTGGAGCTTGGTGCACAAGCTTAA

>Glyma.07g263800.2 sequence-type=CDS polypeptide=Glyma.07g263800.2.p locus=Glyma.07g263800 ID=Glyma.07g263800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGCCGTCTTTCGCAATCAACGGTGGTTTCCCCGGCGCCAGAGTCACTCCTCCTTCCGTCACCGGCCGCTTCGCCGCCGTCTACAGCGAGGTCCAAAACAGCCGCATCGACCACGAACTCCCTCTCCCCTCCGTTCTCAAAAACCCTTTCATCATCGTCGACGGTCCCCAAAGCTCCGCCGCCGGCAACCCTGAGGAGATCGCGAAGCTGTTCCCGAAACTGTTCGGGCAACCGTCGGCGGCTTTGGTGCCGAGTGATTCCCACGCGCCGCATGCAAATCGGAAGCTGAAGATTGGCGTGGTTCTGTCCGGTGGCCAGGCTCCCGGCGGTCACAATGTTATTTCTGGAATCTTCGATTACCTGCAAGACCTTGCAGAAGGAAGCACATTGTATGGTTTCAGGGGTGGTCCAGCTGGCATCATGAAGTGCAAATACGTTGAACTTACCTCAGACTATATTTATCCTTACAGAAATCAGGGTGGTTTTGACATGATTCGCAGTGGGAGGGACAAGATTGAAACTCCAGAGCAGTTTAAACAAGCTGAAGAAACAGTGCAGAAGCTAAACTTGGACGGCCTTGTTGTTATTGGTGGAGATGACTCAAACACAAATGCATGCCTCCTTGCTGAGCATTTCAGGAGTAAAAATATGAAAACTCGTGTGATTGGGTGCCCTAAAACCATTGATGGTGATTTGAAATGCAAAGAAGTTCCCACAAGTTTTGGGTTTGATACAGCATGCAAGATATATGCAGAAATGATTGGCAATGTTATGATAGATGCTCGATCAACTGGAAAATATTACCATTTTGTTCGGCTTATGGGACGTGCAGCTTCGCACATTACACTGGAATGTGCTTTGCAAACTCATCCAAACATTACTATTATTGGAGAAGAGGTTGCTGCCAAGAAGATGACACTGAAGGATGTCACTGACTACATTGTTAATATCATTTCTAAAAGAGCTGAGGATAATTATAACTATGGGGTCATTCTTATCCCTGAAGGTCTAATTGATTTTATTCCTGAGGTCCAACACCTTATTGCAGAACTCAATGAAATTCTGGCAAATGACGCTGTGGATGAGGGAGGGCTATGGAAGAAGAAACTCACCGATCAGTCATTAAAGCTTTTTGAATTTTTACCTAAAGCAATTCAAGAACAATTAATGCTTGAAAGAGATCCGCATGGAAATGTTCAGGTTGCCAAGATAGAAACAGAGAAAATGCTTATTCAAATGGTTGAAACTGAGTTGGAGAAGAGAAAGCAACAGGGCACATATAAAGGAGGATTTAGGGGGCAGTCCCACTTTTTCGGCTATGAAGGGAGATGTGGCTTGCCAACTAATTTTGATTCTACTTACTGCTATGCATTGGGTTATGGTGCTGCAGCCCTCCTTCAAAGTGGGAAGACTGGATTAATATCATCGGTTGGTAATTTATGTGCTCCTGTAGAAGAATGGACTGTTGGTGGAACTGCACTCACTTCATTGATGGACGTGGAGAGGAGACATGGTAAATTCAAGCCTGTGATCAAGAAGGCAATGGTGGAGCTTGAAGGGGCACCCTTCAAAAAGTTTGCCTCCTTGAGGGATGAGTGGGCCCTAAAAAATTGCTACATTAGTCCAGGTATGCATTGA
Predicted protein sequences of Glyma.07g263800
>Glyma.07g263800.1.p sequence-type=predicted peptide transcript=Glyma.07g263800.1 locus=Glyma.07g263800 ID=Glyma.07g263800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAPSFAINGGFPGARVTPPSVTGRFAAVYSEVQNSRIDHELPLPSVLKNPFIIVDGPQSSAAGNPEEIAKLFPKLFGQPSAALVPSDSHAPHANRKLKIGVVLSGGQAPGGHNVISGIFDYLQDLAEGSTLYGFRGGPAGIMKCKYVELTSDYIYPYRNQGGFDMIRSGRDKIETPEQFKQAEETVQKLNLDGLVVIGGDDSNTNACLLAEHFRSKNMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIYAEMIGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKMTLKDVTDYIVNIISKRAEDNYNYGVILIPEGLIDFIPEVQHLIAELNEILANDAVDEGGLWKKKLTDQSLKLFEFLPKAIQEQLMLERDPHGNVQVAKIETEKMLIQMVETELEKRKQQGTYKGGFRGQSHFFGYEGRCGLPTNFDSTYCYALGYGAAALLQSGKTGLISSVGNLCAPVEEWTVGGTALTSLMDVERRHGKFKPVIKKAMVELEGAPFKKFASLRDEWALKNCYISPGPIQFTGPGSDAINHTLLLELGAQA*

>Glyma.07g263800.2.p sequence-type=predicted peptide transcript=Glyma.07g263800.2 locus=Glyma.07g263800 ID=Glyma.07g263800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAPSFAINGGFPGARVTPPSVTGRFAAVYSEVQNSRIDHELPLPSVLKNPFIIVDGPQSSAAGNPEEIAKLFPKLFGQPSAALVPSDSHAPHANRKLKIGVVLSGGQAPGGHNVISGIFDYLQDLAEGSTLYGFRGGPAGIMKCKYVELTSDYIYPYRNQGGFDMIRSGRDKIETPEQFKQAEETVQKLNLDGLVVIGGDDSNTNACLLAEHFRSKNMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIYAEMIGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKMTLKDVTDYIVNIISKRAEDNYNYGVILIPEGLIDFIPEVQHLIAELNEILANDAVDEGGLWKKKLTDQSLKLFEFLPKAIQEQLMLERDPHGNVQVAKIETEKMLIQMVETELEKRKQQGTYKGGFRGQSHFFGYEGRCGLPTNFDSTYCYALGYGAAALLQSGKTGLISSVGNLCAPVEEWTVGGTALTSLMDVERRHGKFKPVIKKAMVELEGAPFKKFASLRDEWALKNCYISPGMH*






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