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Report for Sequence Feature Glyma.07g242500

Feature Type:gene_model
Chromosome:Gm07
Start:42544995
stop:42554645
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.07g242500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G16144.1AT AMSH3 JGI N/AIEA
3.4.19.12EC ubiquitinyl hydrolase 1 JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K11866KEGG Ubiquitin system JGI N/AIEA
KOG2880 KOG SMAD6 interacting protein AMSH, contains JAB/MPN/Mov34 domain JGI N/AIEA
PTHR12947PantherFam AMSH-LIKE PROTEASE JGI N/AIEA
PTHR12947:SF4PantherFam AMSH-LIKE UBIQUITIN THIOESTERASE 2 JGI N/AIEA
PF01398Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease JGI N/AIEA
PF08969Pfam USP8 dimerisation domain JGI N/AIEA

Gene model name correspondences to Glyma.07g242500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma07g37130 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.07g242500
>Glyma.07g242500.1 sequence-type=CDS polypeptide=Glyma.07g242500.1.p locus=Glyma.07g242500 id=Glyma.07g242500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACCATCGACTTGGATTCGATCGCTCGCAGAGTCGAGGTTGATAATCGCATTCCAATCCGCTATTACTATCGGATTGCCGATAACCTCCTCAAGCAGGCAACTATCTACCGGGAGGAGAATAATGTAGTTGACTTGTACATCATTCTCCTTAGATTTTTAAGTTTGGTTTCTGAAACTATACCATATCATCGAGATTATCAAGCTTCATTGCCCAACGAAAGAGCAGCATATAAGAAGAGATCGCGAGCTGTGTTGGATGAGCTTGAATCTTTGAAGCCTGAATTTAAACGCCGGGTGGAAAAAATGAATGACTCACATGTAAAAGCTCCATTCCCTGAAGAAAATGGCTTCAATAAGGCTTTGCAGAGTTCAGTGAATTCATCTTTGGAATGGCCGGCTGTTAGTAAACAGCCTACTGCTGGATTCAGTTCACACTCTTCATGGAATTATGATAATATGTTATCTTTAGATTCCAGGCCTATTGACAAGCAGTTTCAGAAACTATCTCTTAGTCTACCCCCTCCAAATAAGGAGACTTTGTCCAGACACTCATTTTTAGGACCAAATGGCCTTCGGGGCCAATGGCTTGGACCTAGTGCTGAAATAAAGGTTCAATATCCAAGCAGTAGTGATCTCACACATGCCAAGGATTCAAGCCTGAATCAGGCTGGGCTATATGATCTTGGGGCAATTAAAGATGGCGATCAAGGACCTGTTACATCCACAATGGACTCAGTTCTCTCCTTGGATGATGGAAGTTGGTTGCGTCCTGCTGTTGAGTCCTGTTCTCCTGTTGTAACTGAATCAAGGGAGGACCCCTTACAATTGCTCAACATCAAGCAACCTTTGCCGCCTCCTGTTCTTGCTCAGGTGTACCCAGAACATGCCCCTATTCCTCCTTCAAAAGTTGCAGATCCAAGGCCAGGACCAGCTAAATCATCTCATGATTCTGGACTTGGTTCAACTACATATCAACACCTACATATTCCTGTCAAAATGATGGAAGATTTTTTGAGATTAGCTTCGGAAAACACACGGAAGAACTTAGAGACATGTGGTGTTCTTGCAGGATCCCTGAAAAAAAGGGTATTCCATATCACAACACTTATAATCCCAAAGCAGGAATCAACTTCAGACTCGTGTCAAACATTGAACGAAGAAGAAATATTTGAAGTTCAAGACAGCTTATCACTTTTTCCTTTAGGTTGGATACATACACACCCGTCACAGACTTGTTTCATGTCTTCTGTAGATCTACACACTCATTACTCATACCAGATCATGTTACCAGAGGCAATTGCTATTGTCATGGCCCCTACAGATACTACAAGTCCACATGGCATATTCCATCTGTCTGATCCGGGTGGTGTGTCTGTCATTCGTAACTGTCAACAACGTGGATTTCATCCCCATGAGGAGCCTGAGGATGGGACTCCAATATATGAGCACTGTTCCCATGTCTATATGAATGCTAACTTGAAGTTCGATGTTGTTGACCTTCGAGAGCGATGA
Predicted protein sequences of Glyma.07g242500
>Glyma.07g242500.1.p sequence-type=predicted peptide transcript=Glyma.07g242500.1 locus=Glyma.07g242500 id=Glyma.07g242500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTIDLDSIARRVEVDNRIPIRYYYRIADNLLKQATIYREENNVVDLYIILLRFLSLVSETIPYHRDYQASLPNERAAYKKRSRAVLDELESLKPEFKRRVEKMNDSHVKAPFPEENGFNKALQSSVNSSLEWPAVSKQPTAGFSSHSSWNYDNMLSLDSRPIDKQFQKLSLSLPPPNKETLSRHSFLGPNGLRGQWLGPSAEIKVQYPSSSDLTHAKDSSLNQAGLYDLGAIKDGDQGPVTSTMDSVLSLDDGSWLRPAVESCSPVVTESREDPLQLLNIKQPLPPPVLAQVYPEHAPIPPSKVADPRPGPAKSSHDSGLGSTTYQHLHIPVKMMEDFLRLASENTRKNLETCGVLAGSLKKRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDSLSLFPLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTTSPHGIFHLSDPGGVSVIRNCQQRGFHPHEEPEDGTPIYEHCSHVYMNANLKFDVVDLRER*






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