Glyma.07g231900

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Report for Sequence Feature Glyma.07g231900

Feature Type:	gene_model
Chromosome:	Gm07
Start:	41273386
stop:	41278819
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.07g231900

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G49420.1	AT	Got1/Sft2-like vescicle transport protein family	JGI	N/A	IEA
GO:0016192	GO-bp	vesicle-mediated transport	EnsemblGenomes	N/A	IEA
GO:0016192	GO-bp	vesicle-mediated transport	JGI	N/A	IEA
GO:0016020	GO-cc	membrane	EnsemblGenomes	N/A	IEA
GO:0016021	GO-cc	integral component of membrane	EnsemblGenomes	N/A	IEA
KOG1743	KOG	Ferric reductase-like proteins	JGI	N/A	IEA
PTHR21493	Panther	CGI-141-RELATED/LIPASE CONTAINING PROTEIN	JGI	N/A	IEA
PTHR21493:SF10	Panther		JGI	N/A	IEA
PF04178	PFAM	Got1/Sft2-like family	JGI	N/A	IEA

Expression Patterns of Glyma.07g231900

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.07g231900 not represented in the dataset	Glyma.07g231900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.07g231900

Paralog	Evidence	Comments
Glyma.20g040900	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.07g231900 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments

Transcripts of Glyma.07g231900

Limit To All Plant Sequences

>Glyma.07g231900.2 sequence-type=transcript locus=Glyma.07g231900 ID=Glyma.07g231900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAAATCTCTCATTCTATTGGCCGAAAAACATCATCATTACAATTCTGATTTTGCAATATAGTAGTAATAAAAAACGAATCAACGAACAAAGCAAAATCAACAAAAGAAACTGAAAAACAGTGAAAACCATAACACAATACCTCACGTACCTCTCCATAACTTCCATCTTCGCCGAATCACAACTTTCACCACCGTCACCGGCACCGATCACCGCCCTACGACAACCGTGAAGGCAAGACACTTGGACATCTGAATCATTGGTATAAAATGGTTTCGTTTGAAATGAATGATCGGAAGAAGATTGGATTAGGCTTAACGGGATTTGGTATATTTTTCTCATTCCTTGGCCTTATCTTCTTCTTTGACAAGGGATTGCTAGCAATGGGAAATATACTCTTTGTTTCTGGAGTATCCCTGACCATTGGACTGAAATCCACTATGCAATTCTTCATGAAACGTAGTAATTTCAAGGGAACAATTTCATTTGGTATTGGGTTCTTTATTCTTATCTTGGGGTGGCCTATTCTGGGCATGATTGTGGAGTCTTATGGGTTCATCATACTCTTCAGTGGTTTCTGGCCTACACTGGCTGTTTTCTTGCAGAAGATCCCTGTTCTCGGTTGGTTGTTTCAACAGCCATATGTTCGATCGTTATTGGACCGCTACAGAGGCAGACGAGTGCCTGTGTAACTCGTGGAATTTTAGAACATTATGTAGCTGCTAGGAAGCGCATATGTAAGTCAGTGTAAAGAAAACACTCTCGTATGGAGACCTAACTCTGAATTCTGATGGTATAAAATTGTCATAATCATTTTATTCAAAGGAAAATGGAAAGGAAAAAGTTTTTGTATTCATTTTACAACTCCTTTTTAGGCCCCTTTTTGATTCTCATGCCTCATGGAAAATCAATCAATTGATCTTTGGAGTTTTCAGTTCTTCAACTTCTTCTACATTACTGTCCAATTCAGACGACATCATTGGAAAGGTTTCTGTACGTAGGGTGTTATGGTGACATTTGTTTACAATTCGTCAGAGGAATATAATGATTTTAAGTGATATCAAATGGTGTTAGTGCAACAATATGGTGCTTGACATTTTTATTTCTTTATTTGAAATATATTCTTCTAGTGAGAGTTGGGATTGGCTGTGGAATGTTTTTTTTTTTTTT

>Glyma.07g231900.3 sequence-type=transcript locus=Glyma.07g231900 ID=Glyma.07g231900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AACAAAGCAAAATCAACAAAAGAAACTGAAAAACAGTGAAAACCATAACACAATACCTCACGTACCTCTCCATAACTTCCATCTTCGCCGAATCACAACTTTCACCACCGTCACCGGCACCGATCACCGCCCTACGACAACCGATCCAACTCGTCAATAGTCTTTTCCCTTAATTGTTCGGATCAATTTCTTCGCCTTCTATTTTGGAGTTCGTGTTGCGAATCGCGAAACTGTGGCGTGTGGTTGCTTGTTTGAAGGCAAGACACTTGGACATCTGAATCATTGGTATAAAATGGTTTCGTTTGAAATGAATGATCGGAAGAAGATTGGATTAGGCTTAACGGGATTTGGTATATTTTTCTCATTCCTTGGCCTTATCTTCTTCTTTGACAAGGGATTGCTAGCAATGGGAAATATACTCTTTGTTTCTGGAGTATCCCTGACCATTGGACTGAAATCCACTATGCAATTCTTCATGAAACGTAGTAATTTCAAGGGAACAATTTCATTTGGTATTGGGTTCTTTATTCTTATCTTGGGGTGGCCTATTCTGGGCATGATTGTGGAGTCTTATGGGTTCATCATACTCTTCAGTGGTTTCTGGCCTACACTGGCTGTTTTCTTGCAGAAGATCCCTGTTCTCGGTTGGTTGTTTCAACAGCCATATGTTCGATCGTTATTGGACCGCTACAGAGGCAGACGAGTGCCTGTGTAACTCGTGGAATTTTAGAACATTATGTAGCTGCTAGGAAGCGCATATGTAAGTCAGTGTAAAGAAAACACTCTCGTATGGAGACCTAACTCTGAATTCTGATGGTATAAAATTGTCATAATCATTTTATTCAAAGGAAAATGGAAAGGAAAAAGTTTTTGTATTCATTTTACAACTCCTTTTTAGGCCCCTTTTTGATTCTCATGCCTCATGGAAAATCAATCAATTGATCTTTGGAGTTTTCAGTTCTTCAACTTCTTCTACATTACTGTCCAATTCAGACGACATCATTGGAAAGGTTTCTGTACGTAGGGTGTTATGGTGACATTTGTTTACAATTCGTCAGAGGAATATAATGATTTTAAGTGATATCAAATGGTGTTAGTGCAACAATATG

>Glyma.07g231900.4 sequence-type=transcript locus=Glyma.07g231900 ID=Glyma.07g231900.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAGCAAAATCAACAAAAGAAACTGAAAAACAGTGAAAACCATAACACAATACCTCACGTACCTCTCCATAACTTCCATCTTCGCCGAATCACAACTTTCACCACCGTCACCGGCACCGATCACCGCCCTACGACAACCGGCAAGACACTTGGACATCTGAATCATTGGTATAAAATGGTTTCGTTTGAAATGAATGATCGGAAGAAGATTGGATTAGGCTTAACGGGATTTGGTATATTTTTCTCATTCCTTGGCCTTATCTTCTTCTTTGACAAGGGATTGCTAGCAATGGGAAATATACTCTTTGTTTCTGGAGTATCCCTGACCATTGGACTGAAATCCACTATGCAATTCTTCATGAAACGTAGTAATTTCAAGGGAACAATTTCATTTGGTATTGGGTTCTTTATTCTTATCTTGGGGTGGCCTATTCTGGGCATGATTGTGGAGTCTTATGGGTTCATCATACTCTTCAGTGGTTTCTGGCCTACACTGGCTGTTTTCTTGCAGAAGATCCCTGTTCTCGGTTGGTTGTTTCAACAGCCATATGTTCGATCGTTATTGGACCGCTACAGAGGCAGACGAGTGCCTGTGTAACTCGTGGAATTTTAGAACATTATGTAGCTGCTAGGAAGCGCATATGTAAGTCAGTGTAAAGAAAACACTCTCGTATGGAGACCTAACTCTGAATTCTGATGGTATAAAATTGTCATAATCATTTTATTCAAAGGAAAATGGAAAGGAAAAAGTTTTTGTATTCATTTTACAACTCCTTTTTAGGCCCCTTTTTGATTCTCATGCCTCATGGAAAATCAATCAATTGATCTTTGGAGTTTTCAGTTCTTCAACTTCTTCTACATTACTGTCCAATTCAGACGACATCATTGGAAAGGTTTCTGTACGTAGGGTGTTATGGTGACATTTGTTTACAATTCGTCAGAGGAATATAATGATTTTAAGTG

Coding sequences of Glyma.07g231900

Limit To All Plant Sequences

>Glyma.07g231900.1 sequence-type=CDS polypeptide=Glyma.07g231900.1.p locus=Glyma.07g231900 ID=Glyma.07g231900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTTCGTTTGAAATGAATGATCGGAAGAAGATTGGATTAGGCTTAACGGGATTTGGTATATTTTTCTCATTCCTTGGCCTTATCTTCTTCTTTGACAAGGGATTGCTAGCAATGGGAAATATACTCTTTGTTTCTGGAGTATCCCTGACCATTGGACTGAAATCCACTATGCAATTCTTCATGAAACGTAGTAATTTCAAGGGAACAATTTCATTTGGTATTGGGTTCTTTATTCTTATCTTGGGGTGGCCTATTCTGGGCATGATTGTGGAGTCTTATGGGTTCATCATACTCTTCAGTGGTTTCTGGCCTACACTGGCTGTTTTCTTGCAGAAGATCCCTGTTCTCGGTTGGTTGTTTCAACAGCCATATGTTCGATCGTTATTGGACCGCTACAGAGGCAGACGAGTGCCTGTGTAA

>Glyma.07g231900.2 sequence-type=CDS polypeptide=Glyma.07g231900.2.p locus=Glyma.07g231900 ID=Glyma.07g231900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTTCGTTTGAAATGAATGATCGGAAGAAGATTGGATTAGGCTTAACGGGATTTGGTATATTTTTCTCATTCCTTGGCCTTATCTTCTTCTTTGACAAGGGATTGCTAGCAATGGGAAATATACTCTTTGTTTCTGGAGTATCCCTGACCATTGGACTGAAATCCACTATGCAATTCTTCATGAAACGTAGTAATTTCAAGGGAACAATTTCATTTGGTATTGGGTTCTTTATTCTTATCTTGGGGTGGCCTATTCTGGGCATGATTGTGGAGTCTTATGGGTTCATCATACTCTTCAGTGGTTTCTGGCCTACACTGGCTGTTTTCTTGCAGAAGATCCCTGTTCTCGGTTGGTTGTTTCAACAGCCATATGTTCGATCGTTATTGGACCGCTACAGAGGCAGACGAGTGCCTGTGTAA

>Glyma.07g231900.3 sequence-type=CDS polypeptide=Glyma.07g231900.3.p locus=Glyma.07g231900 ID=Glyma.07g231900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTTCGTTTGAAATGAATGATCGGAAGAAGATTGGATTAGGCTTAACGGGATTTGGTATATTTTTCTCATTCCTTGGCCTTATCTTCTTCTTTGACAAGGGATTGCTAGCAATGGGAAATATACTCTTTGTTTCTGGAGTATCCCTGACCATTGGACTGAAATCCACTATGCAATTCTTCATGAAACGTAGTAATTTCAAGGGAACAATTTCATTTGGTATTGGGTTCTTTATTCTTATCTTGGGGTGGCCTATTCTGGGCATGATTGTGGAGTCTTATGGGTTCATCATACTCTTCAGTGGTTTCTGGCCTACACTGGCTGTTTTCTTGCAGAAGATCCCTGTTCTCGGTTGGTTGTTTCAACAGCCATATGTTCGATCGTTATTGGACCGCTACAGAGGCAGACGAGTGCCTGTGTAA

>Glyma.07g231900.4 sequence-type=CDS polypeptide=Glyma.07g231900.4.p locus=Glyma.07g231900 ID=Glyma.07g231900.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTTCGTTTGAAATGAATGATCGGAAGAAGATTGGATTAGGCTTAACGGGATTTGGTATATTTTTCTCATTCCTTGGCCTTATCTTCTTCTTTGACAAGGGATTGCTAGCAATGGGAAATATACTCTTTGTTTCTGGAGTATCCCTGACCATTGGACTGAAATCCACTATGCAATTCTTCATGAAACGTAGTAATTTCAAGGGAACAATTTCATTTGGTATTGGGTTCTTTATTCTTATCTTGGGGTGGCCTATTCTGGGCATGATTGTGGAGTCTTATGGGTTCATCATACTCTTCAGTGGTTTCTGGCCTACACTGGCTGTTTTCTTGCAGAAGATCCCTGTTCTCGGTTGGTTGTTTCAACAGCCATATGTTCGATCGTTATTGGACCGCTACAGAGGCAGACGAGTGCCTGTGTAA

Predicted protein sequences of Glyma.07g231900

Limit To All Plant Sequences

>Glyma.07g231900.1.p sequence-type=predicted peptide transcript=Glyma.07g231900.1 locus=Glyma.07g231900 ID=Glyma.07g231900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVSFEMNDRKKIGLGLTGFGIFFSFLGLIFFFDKGLLAMGNILFVSGVSLTIGLKSTMQFFMKRSNFKGTISFGIGFFILILGWPILGMIVESYGFIILFSGFWPTLAVFLQKIPVLGWLFQQPYVRSLLDRYRGRRVPV*

>Glyma.07g231900.2.p sequence-type=predicted peptide transcript=Glyma.07g231900.2 locus=Glyma.07g231900 ID=Glyma.07g231900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVSFEMNDRKKIGLGLTGFGIFFSFLGLIFFFDKGLLAMGNILFVSGVSLTIGLKSTMQFFMKRSNFKGTISFGIGFFILILGWPILGMIVESYGFIILFSGFWPTLAVFLQKIPVLGWLFQQPYVRSLLDRYRGRRVPV*

>Glyma.07g231900.3.p sequence-type=predicted peptide transcript=Glyma.07g231900.3 locus=Glyma.07g231900 ID=Glyma.07g231900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVSFEMNDRKKIGLGLTGFGIFFSFLGLIFFFDKGLLAMGNILFVSGVSLTIGLKSTMQFFMKRSNFKGTISFGIGFFILILGWPILGMIVESYGFIILFSGFWPTLAVFLQKIPVLGWLFQQPYVRSLLDRYRGRRVPV*

>Glyma.07g231900.4.p sequence-type=predicted peptide transcript=Glyma.07g231900.4 locus=Glyma.07g231900 ID=Glyma.07g231900.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVSFEMNDRKKIGLGLTGFGIFFSFLGLIFFFDKGLLAMGNILFVSGVSLTIGLKSTMQFFMKRSNFKGTISFGIGFFILILGWPILGMIVESYGFIILFSGFWPTLAVFLQKIPVLGWLFQQPYVRSLLDRYRGRRVPV*

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