Glyma.07g224800

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Report for Sequence Feature Glyma.07g224800

Feature Type:	gene_model
Chromosome:	Gm07
Start:	40197389
stop:	40200858
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.07g224800

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G56350.1	AT	Pyruvate kinase family protein	JGI	N/A	IEA
GO:0006096	GO-bp	glycolytic process	EnsemblGenomes	N/A	IEA
GO:0006096	GO-bp	glycolysis	JGI	N/A	IEA
GO:0016310	GO-bp	phosphorylation	EnsemblGenomes	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0000287	GO-mf	magnesium ion binding	EnsemblGenomes	N/A	IEA
GO:0000287	GO-mf	magnesium ion binding	JGI	N/A	IEA
GO:0003824	GO-mf	catalytic activity	EnsemblGenomes	N/A	IEA
GO:0004743	GO-mf	pyruvate kinase activity	EnsemblGenomes	N/A	IEA
GO:0004743	GO-mf	pyruvate kinase activity	JGI	N/A	IEA
GO:0016301	GO-mf	kinase activity	EnsemblGenomes	N/A	IEA
GO:0016740	GO-mf	transferase activity	EnsemblGenomes	N/A	IEA
GO:0030955	GO-mf	potassium ion binding	EnsemblGenomes	N/A	IEA
GO:0030955	GO-mf	potassium ion binding	JGI	N/A	IEA
KOG2323	KOG	Pyruvate kinase	JGI	N/A	IEA
PTHR11817	Panther	PYRUVATE KINASE	JGI	N/A	IEA
PF00224	PFAM	Pyruvate kinase, barrel domain	JGI	N/A	IEA
PF02887	PFAM	Pyruvate kinase, alpha/beta domain	JGI	N/A	IEA
GLYCOLYSIS	SoyCyc9	glycolysis I (from glucose 6-phosphate)	Plant Metabolic Network		ISS
PWY-1042	SoyCyc9	glycolysis IV (plant cytosol)	Plant Metabolic Network		ISS
PWY-5464	SoyCyc9	superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle	Plant Metabolic Network		ISS
PWY-5484	SoyCyc9	glycolysis II (from fructose 6-phosphate)	Plant Metabolic Network		ISS
PWY-5723	SoyCyc9	Rubisco shunt	Plant Metabolic Network		ISS
PWY-7345	SoyCyc9	superpathway of anaerobic sucrose degradation	Plant Metabolic Network		ISS
GN7V-67889	SoyCyc9-rxn	pyruvate kinase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.07g224800

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.07g224800 not represented in the dataset	Glyma.07g224800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.07g224800

Paralog	Evidence	Comments
Glyma.20g024800	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.07g224800 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma07g35110	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.07g224800

Limit To All Plant Sequences

>Glyma.07g224800.2 sequence-type=transcript locus=Glyma.07g224800 ID=Glyma.07g224800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTTTTTTATTATTATTTAAAAAAAAGGTGAATAGGTCAGTGAATGGCATCGCAGAGGCAGAGCATAACAACACAAGAGTCGCATCTCAAGCTTTTGTCTTTCTCTACTTTTCTTCTTCTTTCTGTGTATCGTATCGTATTGGAGAGAAGAGATGGCGACGAGGGTGGTGGCGGAACAGAAGCCGAAGACGAAGATTGTGTGCACGCTGGGGCCCGCATCGCGCTCTGTCCCAATGATCGAGAAGCTTCTGCGGGCGGGCATGAACGTGGCTCGCTTCAACTTCTCCCATGGGTCCCACGAGTACCACCAGGAAACCCTCGACAACCTCCGCGCCGCCATGGAGAACACCGGTATTCTCTGCGCCGTCATGCTCGACACCAAGGGGCCTGAGATTCGAACTGGGTTTCTCAAGGACAGTAAGCCTATCCAACTGAAACAAGGTAATGAAATAACCATTTCCACTGACTATGACCTAAAGGGTGATGAGAAGACGATTTGTATGAGCTACAAAAAGCTGCCTGAGGATGTGAGGCCTGGGATGGTCATACTCTGCGCGGATGGCACCATATCATTTACAGTTTTATCATGTGACAAACAAGCGGGTTTGGTTCAATGCCGATGCGAGAACTCTGCCACTCTTGGTGAGAGGAAGAATGTTAATTTGCCTGGAGTGATAGTGGATCTCCCAACTTTGACAGACAAAGACAAGGAAGATATCTTGGCCTGGGGAGTTCCCAATAAAATTGACATGATTGCTCTTTCTTTTGTTCGAAAAGGTTCTGACCTGGTGGAAGTCAGGAAAGTTCTGGGAAAACATGCCAAGAACATTATGCTCATGTCTAAGGTTGAAAACCAAGAAGGGGTTGCAAATTTTGATGAAATCCTTGCAAATTCAGATGCATTTATGGTGGCACGTGGTGACCTTGGAATGGAAATTCCAATAGAGAAGATATTTCTTGCACAGAAAGTGATGATTTACAAGTGCAACATCCAAGGAAAACCAGTTGTCACTGCAACCCAGATGTTGGAGTCAATGATCAAATCTCCCAGGCCAACCAGGGCTGAAGCTACTGATGTTGCCAATGCAGTTCTGGATGGCACAGACTGTGTGATGCTTAGTGGTGAAACCGCTGCTGGAGCCTATCCAGACCTTGCTGTTCGAACAATGGCTAAAATATGCATTGAAGCAGAGAGCACCCTTGACTATGGAGATGTGTTCAAAAGGATTATGGAGCACTCACCAGTACCCATGAGCCCATTGGAGAGTCTAGCTTCTTCTGCTGTTAGAACAGCCAACTCGGCTAGAGCAGCTCTTATCTTGGTTTTAACTAGAGGAGGGAGTACTGCAAAATTGGTGGCTAAATACAGGCCAGGCATGCCAATTCTTTCTGTGGTTGTTCCCGAGCTTAAGACCGATACCTTTGACTGGGCATGCAGTGATGAGGCCCCTGCAAGACATAGCCTTATATTCCGCGGGTTGGTTCCCGTATTGAGTGCAGCTTCTGCTAGAGCTTCTCATGCTGAAACAACTGAAGAAGCAATAGAATTCGCCATGCAACATGCCAAGTCCAAGGGTCTCTGCCACAACGGGGATTCGGTTGTGGCACTTCATCGTGTGGGCACTGCTTCTGTCATCAAGATCTTGACTGTGAAATGATCACCCCATTACAGGGAATTCTTCTGCTGTTTTTGGCAAATTTTTTAGATGGTGCAAAAGAGGTCTCGTTATACCTCTTCATATCTACATTGGATGCAAACTTCAATCAAAAGCATTTATCAGGATGGGTTACCTGTTTTTCACATATCTTATATTACTGTTTTTTTTTTTTTTTGTTACATTTGCCTTATCATTGTGGCGAGCAGCCACCTGCTTTCATTTGTTAAGATTTTGTATGAGGCTTTTGGTGAACCAAAAAACTAGCCACTTCTGGATTTTGAATTCTACGGTCTAAAGTTGTTTTAATTGAGAAGTGTATGCCTTTTCGTAGCATTGGCAAAGCGGGTT

Coding sequences of Glyma.07g224800

Limit To All Plant Sequences

>Glyma.07g224800.1 sequence-type=CDS polypeptide=Glyma.07g224800.1.p locus=Glyma.07g224800 ID=Glyma.07g224800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGACGAGGGTGGTGGCGGAACAGAAGCCGAAGACGAAGATTGTGTGCACGCTGGGGCCCGCATCGCGCTCTGTCCCAATGATCGAGAAGCTTCTGCGGGCGGGCATGAACGTGGCTCGCTTCAACTTCTCCCATGGGTCCCACGAGTACCACCAGGAAACCCTCGACAACCTCCGCGCCGCCATGGAGAACACCGGTATTCTCTGCGCCGTCATGCTCGACACCAAGGGGCCTGAGATTCGAACTGGGTTTCTCAAGGACAGTAAGCCTATCCAACTGAAACAAGGTAATGAAATAACCATTTCCACTGACTATGACCTAAAGGGTGATGAGAAGACGATTTGTATGAGCTACAAAAAGCTGCCTGAGGATGTGAGGCCTGGGATGGTCATACTCTGCGCGGATGGCACCATATCATTTACAGTTTTATCATGTGACAAACAAGCGGGTTTGGTTCAATGCCGATGCGAGAACTCTGCCACTCTTGGTGAGAGGAAGAATGTTAATTTGCCTGGAGTGATAGTGGATCTCCCAACTTTGACAGACAAAGACAAGGAAGATATCTTGGCCTGGGGAGTTCCCAATAAAATTGACATGATTGCTCTTTCTTTTGTTCGAAAAGGTTCTGACCTGGTGGAAGTCAGGAAAGTTCTGGGAAAACATGCCAAGAACATTATGCTCATGTCTAAGGTTGAAAACCAAGAAGGGGTTGCAAATTTTGATGAAATCCTTGCAAATTCAGATGCATTTATGGTGGCACGTGGTGACCTTGGAATGGAAATTCCAATAGAGAAGATATTTCTTGCACAGAAAGTGATGATTTACAAGTGCAACATCCAAGGAAAACCAGTTGTCACTGCAACCCAGATGTTGGAGTCAATGATCAAATCTCCCAGGCCAACCAGGGCTGAAGCTACTGATGTTGCCAATGCAGTTCTGGATGGCACAGACTGTGTGATGCTTAGTGGTGAAACCGCTGCTGGAGCCTATCCAGACCTTGCTGTTCGAACAATGGCTAAAATATGCATTGAAGCAGAGAGCACCCTTGACTATGGAGATGTGTTCAAAAGGATTATGGAGCACTCACCAGTACCCATGAGCCCATTGGAGAGTCTAGCTTCTTCTGCTGTTAGAACAGCCAACTCGGCTAGAGCAGCTCTTATCTTGGTTTTAACTAGAGGAGGGAGTACTGCAAAATTGGTGGCTAAATACAGGCCAGGCATGCCAATTCTTTCTGTGGTTGTTCCCGAGCTTAAGACCGATACCTTTGACTGGGCATGCAGTGATGAGGCCCCTGCAAGACATAGCCTTATATTCCGCGGGTTGGTTCCCGTATTGAGTGCAGCTTCTGCTAGAGCTTCTCATGCTGAAACAACTGAAGAAGCAATAGAATTCGCCATGCAACATGCCAAGTCCAAGGGTCTCTGCCACAACGGGGATTCGGTTGTGGCACTTCATCGTGTGGGCACTGCTTCTGTCATCAAGATCTTGACTGTGAAATGA

>Glyma.07g224800.2 sequence-type=CDS polypeptide=Glyma.07g224800.2.p locus=Glyma.07g224800 ID=Glyma.07g224800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGACGAGGGTGGTGGCGGAACAGAAGCCGAAGACGAAGATTGTGTGCACGCTGGGGCCCGCATCGCGCTCTGTCCCAATGATCGAGAAGCTTCTGCGGGCGGGCATGAACGTGGCTCGCTTCAACTTCTCCCATGGGTCCCACGAGTACCACCAGGAAACCCTCGACAACCTCCGCGCCGCCATGGAGAACACCGGTATTCTCTGCGCCGTCATGCTCGACACCAAGGGGCCTGAGATTCGAACTGGGTTTCTCAAGGACAGTAAGCCTATCCAACTGAAACAAGGTAATGAAATAACCATTTCCACTGACTATGACCTAAAGGGTGATGAGAAGACGATTTGTATGAGCTACAAAAAGCTGCCTGAGGATGTGAGGCCTGGGATGGTCATACTCTGCGCGGATGGCACCATATCATTTACAGTTTTATCATGTGACAAACAAGCGGGTTTGGTTCAATGCCGATGCGAGAACTCTGCCACTCTTGGTGAGAGGAAGAATGTTAATTTGCCTGGAGTGATAGTGGATCTCCCAACTTTGACAGACAAAGACAAGGAAGATATCTTGGCCTGGGGAGTTCCCAATAAAATTGACATGATTGCTCTTTCTTTTGTTCGAAAAGGTTCTGACCTGGTGGAAGTCAGGAAAGTTCTGGGAAAACATGCCAAGAACATTATGCTCATGTCTAAGGTTGAAAACCAAGAAGGGGTTGCAAATTTTGATGAAATCCTTGCAAATTCAGATGCATTTATGGTGGCACGTGGTGACCTTGGAATGGAAATTCCAATAGAGAAGATATTTCTTGCACAGAAAGTGATGATTTACAAGTGCAACATCCAAGGAAAACCAGTTGTCACTGCAACCCAGATGTTGGAGTCAATGATCAAATCTCCCAGGCCAACCAGGGCTGAAGCTACTGATGTTGCCAATGCAGTTCTGGATGGCACAGACTGTGTGATGCTTAGTGGTGAAACCGCTGCTGGAGCCTATCCAGACCTTGCTGTTCGAACAATGGCTAAAATATGCATTGAAGCAGAGAGCACCCTTGACTATGGAGATGTGTTCAAAAGGATTATGGAGCACTCACCAGTACCCATGAGCCCATTGGAGAGTCTAGCTTCTTCTGCTGTTAGAACAGCCAACTCGGCTAGAGCAGCTCTTATCTTGGTTTTAACTAGAGGAGGGAGTACTGCAAAATTGGTGGCTAAATACAGGCCAGGCATGCCAATTCTTTCTGTGGTTGTTCCCGAGCTTAAGACCGATACCTTTGACTGGGCATGCAGTGATGAGGCCCCTGCAAGACATAGCCTTATATTCCGCGGGTTGGTTCCCGTATTGAGTGCAGCTTCTGCTAGAGCTTCTCATGCTGAAACAACTGAAGAAGCAATAGAATTCGCCATGCAACATGCCAAGTCCAAGGGTCTCTGCCACAACGGGGATTCGGTTGTGGCACTTCATCGTGTGGGCACTGCTTCTGTCATCAAGATCTTGACTGTGAAATGA

Predicted protein sequences of Glyma.07g224800

Limit To All Plant Sequences

>Glyma.07g224800.1.p sequence-type=predicted peptide transcript=Glyma.07g224800.1 locus=Glyma.07g224800 ID=Glyma.07g224800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MATRVVAEQKPKTKIVCTLGPASRSVPMIEKLLRAGMNVARFNFSHGSHEYHQETLDNLRAAMENTGILCAVMLDTKGPEIRTGFLKDSKPIQLKQGNEITISTDYDLKGDEKTICMSYKKLPEDVRPGMVILCADGTISFTVLSCDKQAGLVQCRCENSATLGERKNVNLPGVIVDLPTLTDKDKEDILAWGVPNKIDMIALSFVRKGSDLVEVRKVLGKHAKNIMLMSKVENQEGVANFDEILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPDLAVRTMAKICIEAESTLDYGDVFKRIMEHSPVPMSPLESLASSAVRTANSARAALILVLTRGGSTAKLVAKYRPGMPILSVVVPELKTDTFDWACSDEAPARHSLIFRGLVPVLSAASARASHAETTEEAIEFAMQHAKSKGLCHNGDSVVALHRVGTASVIKILTVK*

>Glyma.07g224800.2.p sequence-type=predicted peptide transcript=Glyma.07g224800.2 locus=Glyma.07g224800 ID=Glyma.07g224800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MATRVVAEQKPKTKIVCTLGPASRSVPMIEKLLRAGMNVARFNFSHGSHEYHQETLDNLRAAMENTGILCAVMLDTKGPEIRTGFLKDSKPIQLKQGNEITISTDYDLKGDEKTICMSYKKLPEDVRPGMVILCADGTISFTVLSCDKQAGLVQCRCENSATLGERKNVNLPGVIVDLPTLTDKDKEDILAWGVPNKIDMIALSFVRKGSDLVEVRKVLGKHAKNIMLMSKVENQEGVANFDEILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPDLAVRTMAKICIEAESTLDYGDVFKRIMEHSPVPMSPLESLASSAVRTANSARAALILVLTRGGSTAKLVAKYRPGMPILSVVVPELKTDTFDWACSDEAPARHSLIFRGLVPVLSAASARASHAETTEEAIEFAMQHAKSKGLCHNGDSVVALHRVGTASVIKILTVK*

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