Glyma.07g221300

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Report for Sequence Feature Glyma.07g221300

Feature Type:	gene_model
Chromosome:	Gm07
Start:	39663346
stop:	39666151
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.07g221300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G35120.1	AT	Single hybrid motif superfamily protein	JGI	N/A	IEA
GO:0006546	GO-bp	glycine catabolic process	JGI	N/A	IEA
GO:0019464	GO-bp	glycine decarboxylation via glycine cleavage system	EnsemblGenomes	N/A	IEA
GO:0005739	GO-cc	mitochondrion	EnsemblGenomes	N/A	IEA
GO:0005960	GO-cc	glycine cleavage complex	EnsemblGenomes	N/A	IEA
GO:0005960	GO-cc	glycine cleavage complex	JGI	N/A	IEA
KOG3373	KOG	Glycine cleavage system H protein (lipoate-binding)	JGI	N/A	IEA
PTHR11715	Panther	GLYCINE CLEAVAGE SYSTEM H PROTEIN	JGI	N/A	IEA
PF01597	PFAM	Glycine cleavage H-protein	JGI	N/A	IEA
GLYCLEAV-PWY	SoyCyc9	glycine cleavage	Plant Metabolic Network		ISS
PWY-181	SoyCyc9	photorespiration	Plant Metabolic Network		ISS
PWY-3841	SoyCyc9	folate transformations II	Plant Metabolic Network		ISS
GN7V-49832	SoyCyc9-rxn	gcv system	Plant Metabolic Network		ISS

Expression Patterns of Glyma.07g221300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.07g221300 not represented in the dataset	Glyma.07g221300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.07g221300

Paralog	Evidence	Comments
Glyma.20g019600	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.07g221300 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma07g34690	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.07g221300

Limit To All Plant Sequences

>Glyma.07g221300.2 sequence-type=transcript locus=Glyma.07g221300 ID=Glyma.07g221300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAACTTTCACCAACCCCCTCAATATAAATAAATGGATGCTCAGCATGACCACAGCATAAGTGTagagagagagagagagagagagagagagagagagagagaAATGGCTTGCAGGCAATTGTGGGCTTCAAGAGCTGCCTCTTACCTGAGGATCTCTGTGTTTCACAGAGGCTTTTCTAATGTTGTTAAAGATTTGAAGTATGCTGATTCTCATGAGTGGGTGAAAGTTGATGAAAATTCTGCAACCGTCGGCATAACTGATCATGCCCAAGATCATTTAGGTGATGTTGTATATGTTGAATTGCCAGAAGTGGGAGCAGCTGTAACACAAGGAGGTAGTTTTGGTGCAGTTGAAAGTGTGAAGGCAACTAGTGACATTAACTCTCCTGTTTCAGGAAAAGTTGTTGAAGTTAATGAAGCGCTTAACAGCTCTCCTGCTTTGGTGAGTTTTATTGCCTAATTCTTAAAGAACTTTTTACATGAAATACAAGTTGTGTATGCTGAGTTTATGTGCATTAACTATTTTTTTCTCCTTTAAGTACTTTGTAGTTTCTACATGCTACATCTTGGATCAGTATGCCTATGCAATGCTGAAGTATTGCAATGAATTCTTTTTTTTTTTATGAACACCAAGTGTTTTCATGTTGTCCTACATTTCTGCATACAGATCAATTCAAGCCCTTATAAAGATGGATGGATAATTAAAGTTGAAATAAGTGACAATGGTGAACTAAACAACTTGATGGATTCAGATCAATACTCCAAATTCTGTGAAGAAGAAGATTCCAAGCACTGATGATCTTGGCAAGATCTTTCAGCACTCTTCAATCTCCATGGTGTAGATCATGTTTTAATTGGGAAAGCTCAATTGCTTATTCCATTTTCTCCTTGTGTTATGTCTTGACTGCTCTATTTTTATTTTTCGAGGGCTTATGATTCAGTGGAATGATATTTTTCACTCTTTGCAATGGAAAAATGAATTTGACAACGTGGCAAATTGATGATGATAATAATAATAACTTAAATAGTTTTATTTTAAAGTTATGCTATTGTTGTTAGATGACGGCTATAATAGTTTGATAAATAAGATGGACAGTAGTTATC

Coding sequences of Glyma.07g221300

Limit To All Plant Sequences

>Glyma.07g221300.1 sequence-type=CDS polypeptide=Glyma.07g221300.1.p locus=Glyma.07g221300 ID=Glyma.07g221300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATGCTCAGCATGACCACAGCATAAGTGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATGGCTTGCAGGCAATTGTGGGCTTCAAGAGCTGCCTCTTACCTGAGGATCTCTGTGTTTCACAGAGGCTTTTCTAATGTTGTTAAAGATTTGAAGTATGCTGATTCTCATGAGTGGGTGAAAGTTGATGAAAATTCTGCAACCGTCGGCATAACTGATCATGCCCAAGATCATTTAGGTGATGTTGTATATGTTGAATTGCCAGAAGTGGGAGCAGCTGTAACACAAGGAGGTAGTTTTGGTGCAGTTGAAAGTGTGAAGGCAACTAGTGACATTAACTCTCCTGTTTCAGGAAAAGTTGTTGAAGTTAATGAAGCGCTTAACAGCTCTCCTGCTTTGATCAATTCAAGCCCTTATAAAGATGGATGGATAATTAAAGTTGAAATAAGTGACAATGGTGAACTAAACAACTTGATGGATTCAGATCAATACTCCAAATTCTGTGAAGAAGAAGATTCCAAGCACTGA

>Glyma.07g221300.2 sequence-type=CDS polypeptide=Glyma.07g221300.2.p locus=Glyma.07g221300 ID=Glyma.07g221300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATGCTCAGCATGACCACAGCATAAGTGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATGGCTTGCAGGCAATTGTGGGCTTCAAGAGCTGCCTCTTACCTGAGGATCTCTGTGTTTCACAGAGGCTTTTCTAATGTTGTTAAAGATTTGAAGTATGCTGATTCTCATGAGTGGGTGAAAGTTGATGAAAATTCTGCAACCGTCGGCATAACTGATCATGCCCAAGATCATTTAGGTGATGTTGTATATGTTGAATTGCCAGAAGTGGGAGCAGCTGTAACACAAGGAGGTAGTTTTGGTGCAGTTGAAAGTGTGAAGGCAACTAGTGACATTAACTCTCCTGTTTCAGGAAAAGTTGTTGAAGTTAATGAAGCGCTTAACAGCTCTCCTGCTTTGGTGAGTTTTATTGCCTAA

Predicted protein sequences of Glyma.07g221300

Limit To All Plant Sequences

>Glyma.07g221300.1.p sequence-type=predicted peptide transcript=Glyma.07g221300.1 locus=Glyma.07g221300 ID=Glyma.07g221300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDAQHDHSISVEREREREREREREMACRQLWASRAASYLRISVFHRGFSNVVKDLKYADSHEWVKVDENSATVGITDHAQDHLGDVVYVELPEVGAAVTQGGSFGAVESVKATSDINSPVSGKVVEVNEALNSSPALINSSPYKDGWIIKVEISDNGELNNLMDSDQYSKFCEEEDSKH*

>Glyma.07g221300.2.p sequence-type=predicted peptide transcript=Glyma.07g221300.2 locus=Glyma.07g221300 ID=Glyma.07g221300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDAQHDHSISVEREREREREREREMACRQLWASRAASYLRISVFHRGFSNVVKDLKYADSHEWVKVDENSATVGITDHAQDHLGDVVYVELPEVGAAVTQGGSFGAVESVKATSDINSPVSGKVVEVNEALNSSPALVSFIA*

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