Glyma.07g181900

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Report for Sequence Feature Glyma.07g181900

Feature Type:	gene_model
Chromosome:	Gm07
Start:	34999770
stop:	35003281
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.07g181900

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G14110.1	AT	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	JGI	N/A	IEA
GO:0016311	GO-bp	dephosphorylation	EnsemblGenomes	N/A	IEA
GO:0016791	GO-mf	phosphatase activity	EnsemblGenomes	N/A	IEA
GO:0016791	GO-mf	phosphatase activity	JGI	N/A	IEA
KOG4549	KOG	Magnesium-dependent phosphatase	JGI	N/A	IEA
PTHR17901	Panther	FAMILY NOT NAMED	JGI	N/A	IEA
PTHR17901:SF6	Panther		JGI	N/A	IEA

Expression Patterns of Glyma.07g181900

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.07g181900 not represented in the dataset	Glyma.07g181900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.07g181900

Paralog	Evidence	Comments
Glyma.08g067900	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.07g181900 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma07g30070	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.07g181900

Limit To All Plant Sequences

>Glyma.07g181900.2 sequence-type=transcript locus=Glyma.07g181900 ID=Glyma.07g181900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CATCATCCAGTTGGAGAGATAACAATGGAGGACGTAGAACGGGTGAAGGCCGAGGCACTGCAAATAATGGGAGTATTTTCACTGCTCCCAAGGCTCGTCGTTTTCGATCTCGATTACACTCTCTGGCCTTTCTACTGTGAGTGCCGGTCGAAGCACGACACGCCTTCTCTGTTTCCACATTCAAGAGGGATATTGCATGCACTCAAACAGGAGAGGATTGATGTTGCCATTGCTTCCAAGTCGCCAACTCCCGACATCGCAACAACGTATCTTGACAAACTCAGCATCAGGTCAATGTTTGCTGCCGAGGCCTCAGAACTTGGAGTGACAAGCATTTTGGTTAGAAATGGGGTAAATCTTGGAGCATTCAGAGACGGCCTCACAAAATTTTCTCAAAACAAGGATGCATCAAAGAAGAACAGACCGAAAAGGCCCAAGTAATACTCTCAGAAGGAAGATACTCTCAACGATGATGCTGAAATTGAATATCCTACTGAAATTTCTCTCTGTGTATTTATTCAGAACCACATCGATTGACGATTTCAAATCTGTTGCCTCTATTACTCCCAATTCCCAGGAGGAAAATTTAAGTGTACCTGGAGCATTTTTAATATGAAAGTTAAATGTTTATCTACTATAATAAGAATCTCAACAAAGCAAACAGAAATAGCTTACATAGTACTACGAGAAGCCAAATATGATACATAAGATATAATATTGAAGTTGAGAATTTAGATTTCAACTGAGTAAACAAATTCAGACAATTTGGTTTACTGTAAAAGTGCACAAATAAAGATGCATGCTTTTATCTTAGGATTTGGTTTAGAGCTTAACTCAAACTCACAAAATTGGCTTGTAAGATAATAATTGCACAAGCCTTATAAGGACTATATTGATCATATCTTTTGTTTTGTTGATGTGAGATTTCAGCATTGCCCATAGATGATTATTTATAGGACATGGTTGAAAATTTCCAATGATTACCCTGAAGGTAGAACTCCACTTTTTTCTCTTATTGACACATTGCACTTGTCCCTCGTACAATAGCCAAGGATAAAGTTATTAAAAAGAAAATGCAAGATGCATTTGTTCTTGAATTAAATAGAAGACCGTTTTTAAGAGTTTTTTCCTGTCTTGAGTTCAATGTTGAGATTCACGCGTCTGAAAGAAAAAAATTGTTGGGAAGGACCTTCACTTTAGCGCTTGATCACACATTGAGATATTAGTTTCATACTTATTCAGTGAATACGTACCCCCGGACACTAAGAACAAAAAACTGGATGATAATGACAACGTTCTACACAAAATTCTAATATCAGTTCTCATATGATCCTTAGATGTAACATTAGTGAATTAATATGATCTACGTTCAAAATACCTTGAACCAATCACAGAATCAAAATTTAACTTTTACAACAGAAACTGCTCTTACAAACTGAAGAGTTAATTATATAACGTCTGTAATAATTGAATTCAAGCCTCTATAAAATCTGAGACAATTTTAAATATTGCTTTATATATTTACAAACAACAGGCCAAATAGCCTAGCTTTAATGGCTAACATTACATCTAAGAACATAACCCAATAGTTACAAAGAATGAACATGCAATTTTGTAAGCAATACTAACATAAACAGAGATTCATAGGTTTGCAGTAGACTTATCTTCACTGCAGATTAATTTCAGCGCTACGCTCAAAATGTTTTAAACTCTATCAGCAAGCAGTAGTTGTTCAAGCTCCTCTCTGCGGCGTTCCAACTCC

Coding sequences of Glyma.07g181900

Limit To All Plant Sequences

>Glyma.07g181900.1 sequence-type=CDS polypeptide=Glyma.07g181900.1.p locus=Glyma.07g181900 ID=Glyma.07g181900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGGACGTAGAACGGGTGAAGGCCGAGGCACTGCAAATAATGGGAGTATTTTCACTGCTCCCAAGGCTCGTCGTTTTCGATCTCGATTACACTCTCTGGCCTTTCTACTGTGAGTGCCGGTCGAAGCACGACACGCCTTCTCTGTTTCCACATTCAAGAGGGATATTGCATGCACTCAAACAGGAGAGGATTGATGTTGCCATTGCTTCCAAGTCGCCAACTCCCGACATCGCAACAACGTATCTTGACAAACTCAGCATCAGGTCAATGTTTGCTGCCGAGGAAATATTTTACACCTGGAAGGACAAAACTGAGCATTTTCAGAGAATTCATTCAAAGACTGGGGTCCCCTATAACTCTATGCTCTTCTTTGACGATGATAATAATAACATCCCAGGGGCCTCAGAACTTGGAGTGACAAGCATTTTGGTTAGAAATGGGGTAAATCTTGGAGCATTCAGAGACGGCCTCACAAAATTTTCTCAAAACAAGGATGCATCAAAGAAGAACAGACCGAAAAGGCCCAAGTAA

>Glyma.07g181900.2 sequence-type=CDS polypeptide=Glyma.07g181900.2.p locus=Glyma.07g181900 ID=Glyma.07g181900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGGACGTAGAACGGGTGAAGGCCGAGGCACTGCAAATAATGGGAGTATTTTCACTGCTCCCAAGGCTCGTCGTTTTCGATCTCGATTACACTCTCTGGCCTTTCTACTGTGAGTGCCGGTCGAAGCACGACACGCCTTCTCTGTTTCCACATTCAAGAGGGATATTGCATGCACTCAAACAGGAGAGGATTGATGTTGCCATTGCTTCCAAGTCGCCAACTCCCGACATCGCAACAACGTATCTTGACAAACTCAGCATCAGGTCAATGTTTGCTGCCGAGGCCTCAGAACTTGGAGTGACAAGCATTTTGGTTAGAAATGGGGTAAATCTTGGAGCATTCAGAGACGGCCTCACAAAATTTTCTCAAAACAAGGATGCATCAAAGAAGAACAGACCGAAAAGGCCCAAGTAA

Predicted protein sequences of Glyma.07g181900

Limit To All Plant Sequences

>Glyma.07g181900.1.p sequence-type=predicted peptide transcript=Glyma.07g181900.1 locus=Glyma.07g181900 ID=Glyma.07g181900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEDVERVKAEALQIMGVFSLLPRLVVFDLDYTLWPFYCECRSKHDTPSLFPHSRGILHALKQERIDVAIASKSPTPDIATTYLDKLSIRSMFAAEEIFYTWKDKTEHFQRIHSKTGVPYNSMLFFDDDNNNIPGASELGVTSILVRNGVNLGAFRDGLTKFSQNKDASKKNRPKRPK*

>Glyma.07g181900.2.p sequence-type=predicted peptide transcript=Glyma.07g181900.2 locus=Glyma.07g181900 ID=Glyma.07g181900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEDVERVKAEALQIMGVFSLLPRLVVFDLDYTLWPFYCECRSKHDTPSLFPHSRGILHALKQERIDVAIASKSPTPDIATTYLDKLSIRSMFAAEASELGVTSILVRNGVNLGAFRDGLTKFSQNKDASKKNRPKRPK*

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