Glyma.07g178400

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Report for Sequence Feature Glyma.07g178400

Feature Type:	gene_model
Chromosome:	Gm07
Start:	34173696
stop:	34178207
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.07g178400

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G33945.1	AT	ARM repeat superfamily protein	JGI	N/A	IEA
GO:0005488	GO-mf	binding	EnsemblGenomes	N/A	IEA
GO:0005515	GO-mf	protein binding	EnsemblGenomes	N/A	IEA
KOG4199	KOG	Uncharacterized conserved protein	JGI	N/A	IEA
PTHR22895	Panther	UNCHARACTERIZED	JGI	N/A	IEA

Expression Patterns of Glyma.07g178400

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.07g178400 not represented in the dataset	Glyma.07g178400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.07g178400 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma07g29440	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.07g178400

Limit To All Plant Sequences

>Glyma.07g178400.2 sequence-type=transcript locus=Glyma.07g178400 ID=Glyma.07g178400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TCACAAAAGTTAACAGACTCATCATATATAATATATAATATGCTGTGATTGAACAACTGTACAAAGTTATTTTATAATGTTAGTTCATACTTTTTTTTTTTTACAAATTGTGTATTTTTGGGTATAAACAAAGAGCCATAGATACCTGGTGAACGACAATAATTTGGTCGTCGTTTCCTCTCATTTCCCAAATCAGTTCACGCTCGTGTCATGTGCTTCTGTTTCTAGGTTCCCCCAACTGACGCAAGTAGAAAAACTTGAAAATTTgaaacagaagcagaagaaggaaacacagacagaaCTGAGAGTGAGTGAGAGCAGAAGAAGGAACGTAGCAACAATGGGTCCAGCGGCAAAGACGACGACGATGCGTTCGATCTCTCAAGAAGCGTTCGAAGAACTGGTGAATGAGAACATCGACGACCTCGGCATGGACCCCACCGAGGCCCTCCAAGACGCAATCCAAACCCTCACTCTCCAAGGCGTCGATCTCTCAGGCATCGTCACGTGCGTCCCCGGAGAAACCAACCCCGTCATCGAGTGCTTGGACCGCTTAAGACACCTTGAAACCGAACCGGACCAAAACCTAATCGCGCAAGCGTTTAACACCCTCCACGAGTTGTGCGCAAATCCAAATTCTGATTCAAATTCAAATGTGGCTATTGCAACCAAAAACGGCGCCGTTGAGCTAGCTTGTTCGCTCTGTTCCAAAATTTCTCTTGCCGCCGGATCTCACGTTGTTCCCCTTGTCTCCGCATTAAACGCGTTGTCGTCGTTGCTTCACGATGTTCAGAGCACGGGGGCTTTTCATCGCTGCGACGGGCCGAGGATTGTGATGGCTTTTCTGGTTGATAATAAGGGAAATGTGGAGCTTTTGAGCAGTGGATTTCGAGTTGTGGCTTCGGCGGCCACCGGAGATGAGATTGTGAAGGAGGCATTTATGGAGTTGAAGGTTGACGAGCTGATTTTGGAGATCATGTCGTTGCATAGGCACAAGGGGATCCAGAGTTTGTATGACGCTGTTTGCGCGCTTTTGATGCCCGACGACGATCGAGTTGTGGCTTCTCAGGTGTATGGTTATGCACGGAAATTTGCAAAGATTGGAATTGCAGAAGCCCTTGTGGATTCTCTGAGTGCAGGGGTTAGCTCACATGACCTGATTTCAGCATGCATCACTTTGAGGGCCGTTGCTGTAAATGATGAAATATGTAAATCCATTGCTGAGAAAGGTGGTATTGATGCATTACTCAGATGTATAGATGACAGTGGTGAACAAGGCGACAAAGCTGTGGCCAAAGTTTGTTGCTCATTACTTTCAAAGTTAGCAGGAAGTGACGCAAACAAGAGTGCAATTGTTGGGAAAGGAGGTATGGATAAGCTAATCAAACTTTCAGCCAGATTTGCTGATGACCCTTCTGTTTTGCAAGAGGATTGCAATTTTATTGTGGTGATCCAAAGAATGGGCATTTGAAATGTGGAAATGCTGTACTCTGGGTGTCTACAATATTATGTCTATTATTTCGGTGCTTTCTTTAAGATCCCCAGACAATGCAGCCCGTGCCATTGAAGCTGGTGCTGGTGACCTTGCTATTCAAGCCATGGAGAAATTTCCTGCGGCACACCAAATGCAGAGAAACTCCTGTCTTATGATCAGAAATCTTGTAGTGAGAAATCCAGAGAACAGAACTATTCTGCTTAATAATGGAATTGAGAAATACATAAGGAAAGCAAAGCAAACACATACCAACTGTAAGGATGCTGCTACAGATGCGTTGAGGGATCTGGGGCTTGATAATTACAACTTGTAGTTGATAATTTGTTTACCTCTGTATTGTCTTACAATGTAATAATACCCATCAATATTTTTTTGTTACTGAAGAAAAAAAGTGAGTGTATGACTACATATTTTAATCGTCTCGTCTCTATTCTCTACGCGAATATTGGATTTGAGGAATTCAATGTACAAACTGAGGTTGAACCTAATACTATATTTTTTTCTTCCTATCATATTATCTTCTACATGTAAA

>Glyma.07g178400.3 sequence-type=transcript locus=Glyma.07g178400 ID=Glyma.07g178400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
TCACAAAAGTTAACAGACTCATCATATATAATATATAATATGCTGTGATTGAACAACTGTACAAAGTTATTTTATAATGTTAGTTCATACTTTTTTTTTTTTACAAATTGTGTATTTTTGGGTATAAACAAAGAGCCATAGATACCTGGTGAACGACAATAATTTGGTCGTCGTTTCCTCTCATTTCCCAAATCAGTTCACGCTCGTGTCATGTGCTTCTGTTTCTAGGTTCCCCCAACTGACGCAAGTAGAAAAACTTGAAAATTTgaaacagaagcagaagaaggaaacacagacagaaCTGAGAGTGAGTGAGAGCAGAAGAAGGAACGTAGCAACAATGGGTCCAGCGGCAAAGACGACGACGATGCGTTCGATCTCTCAAGAAGCGTTCGAAGAACTGGTGAATGAGAACATCGACGACCTCGGCATGGACCCCACCGAGGCCCTCCAAGACGCAATCCAAACCCTCACTCTCCAAGGCGTCGATCTCTCAGGCATCGTCACGTGCGTCCCCGGAGAAACCAACCCCGTCATCGAGTGCTTGGACCGCTTAAGACACCTTGAAACCGAACCGGACCAAAACCTAATCGCGCAAGCGTTTAACACCCTCCACGAGTTGTGCGCAAATCCAAATTCTGATTCAAATTCAAATGTGGCTATTGCAACCAAAAACGGCGCCGTTGAGCTAGCTTGTTCGCTCTGTTCCAAAATTTCTCTTGCCGCCGGATCTCACGTTGTTCCCCTTGTCTCCGCATTAAACGCGTTGTCGTCGTTGCTTCACGATGTTCAGAGCACGGGGGCTTTTCATCGCTGCGACGGGCCGAGGATTGTGATGGCTTTTCTGGTTGATAATAAGGGAAATGTGGAGCTTTTGAGCAGTGGATTTCGAGTTGTGGCTTCGGCGGCCACCGGAGATGAGATTGTGAAGGAGGCATTTATGGAGTTGAAGGTTGACGAGCTGATTTTGGAGATCATGTCGTTGCATAGGCACAAGGGGATCCAGAGTTTGTATGACGCTGTTTGCGCGCTTTTGATGCCCGACGACGATCGAGTTGTGGCTTCTCAGGTGTATGGTTATGCACGGAAATTTGCAAAGATTGGAATTGCAGAAGCCCTTGTGGATTCTCTGAGTGCAGGGGTTAGCTCACATGACCTGATTTCAGCATGCATCACTTTGAGGGCCGTTGCTGTAAATGATGAAATATGTAAATCCATTGCTGAGAAAGGTGGTATTGATGCATTACTCAGATGTATAGATGACAGTGGTGAACAAGGCGACAAAGCTGTGGCCAAAGTTTGTTGCTCATTACTTTCAAAGTTAGCAGGAAGTGACGCAAACAAGAGTGCAATTGTTGGGAAAGGAGGTATGGATAAGCTAATCAAACTTTCAGCCAGATTTGCTGATGACCCTTCTGTTTTGCAAGAGATTATGTCTATTATTTCGGTGCTTTCTTTAAGATCCCCAGACAATGCAGCCCGTGCCATTGAAGCTGGTGCTGGTGACCTTGCTATTCAAGCCATGGAGAAATTTCCTGCGGCACACCAAATGCAGAGAAACTCCTGTCTTATGATCAGAAATCTTGTAGTGAGAAATCCAGAGAACAGAACTATTCTGCTTAATAATGGAATTGAGAAATACATAAGGAAAGCAAAGCAAACACATACCAACTGTAAGGATGCTGCTACAGATGCGTTGAGGGATCTGGGGCTTGATAATTACAACTTGTAGTTGATAATTTGTTTACCTCTGTATTGTCTTACAATGTAATAATACCCATCAATATTTTTTTGTTACTGAAGAAAAAAAGTGAGTGTATGACTACATATTTTAATCGTCTCGTCTCTATTCTCTACGCGAATATTGGATTTGAGGAATTCAATGTACAAACTGAGGTTGAACCTAATACTATATTTTTTTCTTCCTATCATATTATCTTCTACATGTAAA

Coding sequences of Glyma.07g178400

Limit To All Plant Sequences

>Glyma.07g178400.1 sequence-type=CDS polypeptide=Glyma.07g178400.1.p locus=Glyma.07g178400 ID=Glyma.07g178400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGAACATCGACGACCTCGGCATGGACCCCACCGAGGCCCTCCAAGACGCAATCCAAACCCTCACTCTCCAAGGCGTCGATCTCTCAGGTCAAGTTCTTCTTCTCTTCTCTTCTTCCTTCTCACTCTCTCTTTCTCCTAATCTCAAAACGCCGTCGTTTCGCAGGCATCGTCACGTGCGTCCCCGGAGAAACCAACCCCGTCATCGAGTGCTTGGACCGCTTAAGACACCTTGAAACCGAACCGGACCAAAACCTAATCGCGCAAGCGTTTAACACCCTCCACGAGTTGTGCGCAAATCCAAATTCTGATTCAAATTCAAATGTGGCTATTGCAACCAAAAACGGCGCCGTTGAGCTAGCTTGTTCGCTCTGTTCCAAAATTTCTCTTGCCGCCGGATCTCACGTTGTTCCCCTTGTCTCCGCATTAAACGCGTTGTCGTCGTTGCTTCACGATGTTCAGAGCACGGGGGCTTTTCATCGCTGCGACGGGCCGAGGATTGTGATGGCTTTTCTGGTTGATAATAAGGGAAATGTGGAGCTTTTGAGCAGTGGATTTCGAGTTGTGGCTTCGGCGGCCACCGGAGATGAGATTGTGAAGGAGGCATTTATGGAGTTGAAGGTTGACGAGCTGATTTTGGAGATCATGTCGTTGCATAGGCACAAGGGGATCCAGAGTTTGTATGACGCTGTTTGCGCGCTTTTGATGCCCGACGACGATCGAGTTGTGGCTTCTCAGGTGTATGGTTATGCACGGAAATTTGCAAAGATTGGAATTGCAGAAGCCCTTGTGGATTCTCTGAGTGCAGGGGTTAGCTCACATGACCTGATTTCAGCATGCATCACTTTGAGGGCCGTTGCTGTAAATGATGAAATATGTAAATCCATTGCTGAGAAAGGTGGTATTGATGCATTACTCAGATGTATAGATGACAGTGGTGAACAAGGCGACAAAGCTGTGGCCAAAGTTTGTTGCTCATTACTTTCAAAGTTAGCAGGAAGTGACGCAAACAAGAGTGCAATTGTTGGGAAAGGAGGTATGGATAAGCTAATCAAACTTTCAGCCAGATTTGCTGATGACCCTTCTGTTTTGCAAGAGATTATGTCTATTATTTCGGTGCTTTCTTTAAGATCCCCAGACAATGCAGCCCGTGCCATTGAAGCTGGTGCTGGTGACCTTGCTATTCAAGCCATGGAGAAATTTCCTGCGGCACACCAAATGCAGAGAAACTCCTGTCTTATGATCAGAAATCTTGTAGTGAGAAATCCAGAGAACAGAACTATTCTGCTTAATAATGGAATTGAGAAATACATAAGGAAAGCAAAGCAAACACATACCAACTGTAAGGATGCTGCTACAGATGCGTTGAGGGATCTGGGGCTTGATAATTACAACTTGTAG

>Glyma.07g178400.2 sequence-type=CDS polypeptide=Glyma.07g178400.2.p locus=Glyma.07g178400 ID=Glyma.07g178400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTCCAGCGGCAAAGACGACGACGATGCGTTCGATCTCTCAAGAAGCGTTCGAAGAACTGGTGAATGAGAACATCGACGACCTCGGCATGGACCCCACCGAGGCCCTCCAAGACGCAATCCAAACCCTCACTCTCCAAGGCGTCGATCTCTCAGGCATCGTCACGTGCGTCCCCGGAGAAACCAACCCCGTCATCGAGTGCTTGGACCGCTTAAGACACCTTGAAACCGAACCGGACCAAAACCTAATCGCGCAAGCGTTTAACACCCTCCACGAGTTGTGCGCAAATCCAAATTCTGATTCAAATTCAAATGTGGCTATTGCAACCAAAAACGGCGCCGTTGAGCTAGCTTGTTCGCTCTGTTCCAAAATTTCTCTTGCCGCCGGATCTCACGTTGTTCCCCTTGTCTCCGCATTAAACGCGTTGTCGTCGTTGCTTCACGATGTTCAGAGCACGGGGGCTTTTCATCGCTGCGACGGGCCGAGGATTGTGATGGCTTTTCTGGTTGATAATAAGGGAAATGTGGAGCTTTTGAGCAGTGGATTTCGAGTTGTGGCTTCGGCGGCCACCGGAGATGAGATTGTGAAGGAGGCATTTATGGAGTTGAAGGTTGACGAGCTGATTTTGGAGATCATGTCGTTGCATAGGCACAAGGGGATCCAGAGTTTGTATGACGCTGTTTGCGCGCTTTTGATGCCCGACGACGATCGAGTTGTGGCTTCTCAGGTGTATGGTTATGCACGGAAATTTGCAAAGATTGGAATTGCAGAAGCCCTTGTGGATTCTCTGAGTGCAGGGGTTAGCTCACATGACCTGATTTCAGCATGCATCACTTTGAGGGCCGTTGCTGTAAATGATGAAATATGTAAATCCATTGCTGAGAAAGGTGGTATTGATGCATTACTCAGATGTATAGATGACAGTGGTGAACAAGGCGACAAAGCTGTGGCCAAAGTTTGTTGCTCATTACTTTCAAAGTTAGCAGGAAGTGACGCAAACAAGAGTGCAATTGTTGGGAAAGGAGGTATGGATAAGCTAATCAAACTTTCAGCCAGATTTGCTGATGACCCTTCTGTTTTGCAAGAGGATTGCAATTTTATTGTGGTGATCCAAAGAATGGGCATTTGA

>Glyma.07g178400.3 sequence-type=CDS polypeptide=Glyma.07g178400.3.p locus=Glyma.07g178400 ID=Glyma.07g178400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTCCAGCGGCAAAGACGACGACGATGCGTTCGATCTCTCAAGAAGCGTTCGAAGAACTGGTGAATGAGAACATCGACGACCTCGGCATGGACCCCACCGAGGCCCTCCAAGACGCAATCCAAACCCTCACTCTCCAAGGCGTCGATCTCTCAGGCATCGTCACGTGCGTCCCCGGAGAAACCAACCCCGTCATCGAGTGCTTGGACCGCTTAAGACACCTTGAAACCGAACCGGACCAAAACCTAATCGCGCAAGCGTTTAACACCCTCCACGAGTTGTGCGCAAATCCAAATTCTGATTCAAATTCAAATGTGGCTATTGCAACCAAAAACGGCGCCGTTGAGCTAGCTTGTTCGCTCTGTTCCAAAATTTCTCTTGCCGCCGGATCTCACGTTGTTCCCCTTGTCTCCGCATTAAACGCGTTGTCGTCGTTGCTTCACGATGTTCAGAGCACGGGGGCTTTTCATCGCTGCGACGGGCCGAGGATTGTGATGGCTTTTCTGGTTGATAATAAGGGAAATGTGGAGCTTTTGAGCAGTGGATTTCGAGTTGTGGCTTCGGCGGCCACCGGAGATGAGATTGTGAAGGAGGCATTTATGGAGTTGAAGGTTGACGAGCTGATTTTGGAGATCATGTCGTTGCATAGGCACAAGGGGATCCAGAGTTTGTATGACGCTGTTTGCGCGCTTTTGATGCCCGACGACGATCGAGTTGTGGCTTCTCAGGTGTATGGTTATGCACGGAAATTTGCAAAGATTGGAATTGCAGAAGCCCTTGTGGATTCTCTGAGTGCAGGGGTTAGCTCACATGACCTGATTTCAGCATGCATCACTTTGAGGGCCGTTGCTGTAAATGATGAAATATGTAAATCCATTGCTGAGAAAGGTGGTATTGATGCATTACTCAGATGTATAGATGACAGTGGTGAACAAGGCGACAAAGCTGTGGCCAAAGTTTGTTGCTCATTACTTTCAAAGTTAGCAGGAAGTGACGCAAACAAGAGTGCAATTGTTGGGAAAGGAGGTATGGATAAGCTAATCAAACTTTCAGCCAGATTTGCTGATGACCCTTCTGTTTTGCAAGAGATTATGTCTATTATTTCGGTGCTTTCTTTAAGATCCCCAGACAATGCAGCCCGTGCCATTGAAGCTGGTGCTGGTGACCTTGCTATTCAAGCCATGGAGAAATTTCCTGCGGCACACCAAATGCAGAGAAACTCCTGTCTTATGATCAGAAATCTTGTAGTGAGAAATCCAGAGAACAGAACTATTCTGCTTAATAATGGAATTGAGAAATACATAAGGAAAGCAAAGCAAACACATACCAACTGTAAGGATGCTGCTACAGATGCGTTGAGGGATCTGGGGCTTGATAATTACAACTTGTAG

Predicted protein sequences of Glyma.07g178400

Limit To All Plant Sequences

>Glyma.07g178400.1.p sequence-type=predicted peptide transcript=Glyma.07g178400.1 locus=Glyma.07g178400 ID=Glyma.07g178400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MRTSTTSAWTPPRPSKTQSKPSLSKASISQVKFFFSSLLPSHSLFLLISKRRRFAGIVTCVPGETNPVIECLDRLRHLETEPDQNLIAQAFNTLHELCANPNSDSNSNVAIATKNGAVELACSLCSKISLAAGSHVVPLVSALNALSSLLHDVQSTGAFHRCDGPRIVMAFLVDNKGNVELLSSGFRVVASAATGDEIVKEAFMELKVDELILEIMSLHRHKGIQSLYDAVCALLMPDDDRVVASQVYGYARKFAKIGIAEALVDSLSAGVSSHDLISACITLRAVAVNDEICKSIAEKGGIDALLRCIDDSGEQGDKAVAKVCCSLLSKLAGSDANKSAIVGKGGMDKLIKLSARFADDPSVLQEIMSIISVLSLRSPDNAARAIEAGAGDLAIQAMEKFPAAHQMQRNSCLMIRNLVVRNPENRTILLNNGIEKYIRKAKQTHTNCKDAATDALRDLGLDNYNL*

>Glyma.07g178400.2.p sequence-type=predicted peptide transcript=Glyma.07g178400.2 locus=Glyma.07g178400 ID=Glyma.07g178400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGPAAKTTTMRSISQEAFEELVNENIDDLGMDPTEALQDAIQTLTLQGVDLSGIVTCVPGETNPVIECLDRLRHLETEPDQNLIAQAFNTLHELCANPNSDSNSNVAIATKNGAVELACSLCSKISLAAGSHVVPLVSALNALSSLLHDVQSTGAFHRCDGPRIVMAFLVDNKGNVELLSSGFRVVASAATGDEIVKEAFMELKVDELILEIMSLHRHKGIQSLYDAVCALLMPDDDRVVASQVYGYARKFAKIGIAEALVDSLSAGVSSHDLISACITLRAVAVNDEICKSIAEKGGIDALLRCIDDSGEQGDKAVAKVCCSLLSKLAGSDANKSAIVGKGGMDKLIKLSARFADDPSVLQEDCNFIVVIQRMGI*

>Glyma.07g178400.3.p sequence-type=predicted peptide transcript=Glyma.07g178400.3 locus=Glyma.07g178400 ID=Glyma.07g178400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGPAAKTTTMRSISQEAFEELVNENIDDLGMDPTEALQDAIQTLTLQGVDLSGIVTCVPGETNPVIECLDRLRHLETEPDQNLIAQAFNTLHELCANPNSDSNSNVAIATKNGAVELACSLCSKISLAAGSHVVPLVSALNALSSLLHDVQSTGAFHRCDGPRIVMAFLVDNKGNVELLSSGFRVVASAATGDEIVKEAFMELKVDELILEIMSLHRHKGIQSLYDAVCALLMPDDDRVVASQVYGYARKFAKIGIAEALVDSLSAGVSSHDLISACITLRAVAVNDEICKSIAEKGGIDALLRCIDDSGEQGDKAVAKVCCSLLSKLAGSDANKSAIVGKGGMDKLIKLSARFADDPSVLQEIMSIISVLSLRSPDNAARAIEAGAGDLAIQAMEKFPAAHQMQRNSCLMIRNLVVRNPENRTILLNNGIEKYIRKAKQTHTNCKDAATDALRDLGLDNYNL*

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