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Report for Sequence Feature Glyma.07g170900

Feature Type:gene_model
Chromosome:Gm07
Start:29474917
stop:29476456
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.07g170900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G16050.1AT Cysteine/Histidine-rich C1 domain family protein JGI N/AIEA
GO:0098869GO-bp cellular oxidant detoxification EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0004791GO-mf thioredoxin-disulfide reductase activity EnsemblGenomesN/AIEA

Expression Patterns of Glyma.07g170900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.07g170900 not represented in the dataset
Glyma.07g170900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.07g170900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma07g26560 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.07g170900
>Glyma.07g170900.1 sequence-type=CDS polypeptide=Glyma.07g170900.1.p locus=Glyma.07g170900 ID=Glyma.07g170900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAATGAGTACTAAGAAGGGTTGTCCAAGCCATGCACAACCAATGCAACTGAAGCCACCAGGTGCACCATTCAAATGCAGTGGATGTAAACAAATGGGGTTAGGATGCAGTTACCACTGCGAAAGCAGCAACTGCAGTTACACCCTCCATGAAGAGTGTGCGAAAGCTGTTTCTCTAGCCTTCCATTCCTTTTTCCCCAAGAGCGATTTCGAGTTTCATGAGAAAGCACCGGGGAACCGCACTAGGTATTGTGATGGCTGTGGAAAAGATGTGCTGGGGTTTGTGTACCACTGCTCTACCACAGGATATGACCTACATCCATGCTGCTTGAAGCTGAAACATAGCCTTTCTGATGAAGAAGGGCGCGTGACGCTTGAACTGTGCCAGAAGGTTCCCTCCAAGTGTGGGAAGTGTAAGCATAGGAATGTTGTGGAGGGAGTTAAAGGGTGGTCTTATGTGTCTTCTGGGGGGAATTATTGTTACCATGTGTCGTGTGTGAAGGAACTGATTTTTGAGAATTGGAAGAGGGGTTATTTCTCTCAAGAAACAAATTCAACTGGGATGCGTAGTGATAGCGAGAACACTCAAATTGCACTGAGAAGCATGGCGATGGTGCAAAGTGGAAGAAGGTCAAGAAGAATCAAGAAGTACACTAAGATTGCTGTGTTGGTGTTCAAGTTAGTAGTTTCAGCTATTTTTGGAAATCCTATATCTGCCATTGCTGCCCTTGTGGAAGCCCTTGTTTCTGATTGA
Predicted protein sequences of Glyma.07g170900
>Glyma.07g170900.1.p sequence-type=predicted peptide transcript=Glyma.07g170900.1 locus=Glyma.07g170900 ID=Glyma.07g170900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEMSTKKGCPSHAQPMQLKPPGAPFKCSGCKQMGLGCSYHCESSNCSYTLHEECAKAVSLAFHSFFPKSDFEFHEKAPGNRTRYCDGCGKDVLGFVYHCSTTGYDLHPCCLKLKHSLSDEEGRVTLELCQKVPSKCGKCKHRNVVEGVKGWSYVSSGGNYCYHVSCVKELIFENWKRGYFSQETNSTGMRSDSENTQIALRSMAMVQSGRRSRRIKKYTKIAVLVFKLVVSAIFGNPISAIAALVEALVSD*






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