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Report for Sequence Feature Glyma.07g151500

Feature Type:gene_model
Chromosome:Gm07
Start:18389795
stop:18394398
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.07g151500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G51840.1AT acyl-CoA oxidase 4 JGI N/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0003995GO-mf acyl-CoA dehydrogenase activity EnsemblGenomesN/AIEA
GO:0003995GO-mf acyl-CoA dehydrogenase activity JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
GO:0016627GO-mf oxidoreductase activity, acting on the CH-CH group of donors EnsemblGenomesN/AIEA
GO:0016627GO-mf oxidoreductase activity, acting on the CH-CH group of donors JGI N/AIEA
GO:0050660GO-mf flavin adenine dinucleotide binding EnsemblGenomesN/AIEA
GO:0050660GO-mf flavin adenine dinucleotide binding JGI N/AIEA
KOG0138 KOG Glutaryl-CoA dehydrogenase JGI N/AIEA
PTHR10909Panther ELECTRON TRANSPORT OXIDOREDUCTASE JGI N/AIEA
PTHR10909:SF129Panther JGI N/AIEA
PF00441PFAM Acyl-CoA dehydrogenase, C-terminal domain JGI N/AIEA
PF02770PFAM Acyl-CoA dehydrogenase, middle domain JGI N/AIEA
PF02771PFAM Acyl-CoA dehydrogenase, N-terminal domain JGI N/AIEA
PWY-5136SoyCyc9 fatty acid β-oxidation II (peroxisome) Plant Metabolic Network ISS
PWY-561SoyCyc9 superpathway of glyoxylate cycle and fatty acid degradation Plant Metabolic Network ISS
PWY-6837SoyCyc9 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) Plant Metabolic Network ISS
GN7V-55498SoyCyc9-rxn acyl-CoA oxidase Plant Metabolic Network ISS

Expression Patterns of Glyma.07g151500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.07g151500
ParalogEvidenceComments
Glyma.18g202800 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.07g151500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma07g18370 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.07g151500
>Glyma.07g151500.2 sequence-type=transcript locus=Glyma.07g151500 ID=Glyma.07g151500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGATGCCTTCGTATTTTAATTTGCCAGCACTTGATGTTTCTGTGGCTTTTCCACAAGCCACTCCAGCCTCTAATTTTCCTCCTTGTGCTTCGGATTATTTTCATTTCAATGACTTGTTGAAACCGGAGGAGCAGGCCGTGAGGAACAAAGTGAGAGAGTGTATGGAAAAAGAAATTGCTCCTATAATGACTGAGTACTGGGAGAAGGCTGAATTCCCATTTCATGTTATCCCAAAGTTTGCTGCCCTGCGTATTGCTGGTGGCACAATTAAGGGTTATGGTTGTCCTGGTCTTTCCATAACTGGAAGTGCTGTTGCTACAGCAGAAGTTGCTAGAGTTGATGCAAGCTGTTCAACTTTCTATTTGGTTCATTCTTCCTTGGCAATGCTCACTATTGCATTATGTGGGTCTGAAGCTCAGAAGCAAAAGTATTTGCCTTCTTTGGCTCAAATGAAAACTATAGCATGTTGGGTGGGAGGTGGTTGGATCCTTGATGGCCAAAAGAGATGGATAGGAAACAGTACGTTTGCTGATTTGTTGGTTATCTTTGCTAGGAATACGACAACGAATCAAATAAATGGGTACCTAAAGGAGAGGAAGCAATTTGGAGCACCATTAGCAGCTTTCCAAATCAGTCAACAAAAACTTGTTCAAATGCTAGGTAACATTCAAGCAATGATTCTTGTTGGTTGGCGTCTGTGCAAGTTGTACGAGAGTGGTAAAATGACTCCAGGTCATGCTAGCTTGGGGAAGTCGTGGATTACCCTGAGGGCAAGAGAAACAGCTGCCTTGGGGAGAGAATTGCTTGGTGGCAATGGAATTTTGGCTGATTTTCTAGTGGCAAAGGCATTCTGTGACATAGAACCTATCTACACCTTCGAAGGCACGTATGACATCAACACCTTGGTTACAGGCAGGGAAGTTACTGGTTTTGCCAGCTTTAAGTCGGTTGCTCAGAAAAGTAGGCTGTGAAAGTGTAAAATGTGTTCCTCTATGGACTAATAGACTTCGTTGGTTTATGTATTTATAATAATATGAATCGAATAACAATCCATAAGCATTAAATAATTATACAAATGTGTTAATAACAAAGCAGGGAAATGAAAATTAATGATCTTGAGATATTCTTCCAGTCCATATCCACGCTTTCACTTCTGATAACTTGTAGATGCTGAATGTTTGAAACTGCTGCTTTAGCATTAGTTATTGTCCTGCTCTTGCTGTGTGAATGAACTTATGAACCCCCTGTGTTGAGGAAAGGGCCAAAAAGACCCCTTAGGGAGAAA

>Glyma.07g151500.3 sequence-type=transcript locus=Glyma.07g151500 ID=Glyma.07g151500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGATGCCTTCGTATTTTAATTTGCCAGCACTTGATGTTTCTGTGGCTTTTCCACAAGCCACTCCAGCCTCTAATTTTCCTCCTTGTGCTTCGGATTATTTTCATTTCAATGACTTGTTGAAACCGGAGGAGCAGGCCGTGAGGAACAAAGTGAGAGAGTGTATGGAAAAAGAAATTGCTCCTATAATGACTGAGTACTGGGAGAAGGCTGAATTCCCATTTCATGTTATCCCAAAGTTTGCTGCCCTGCGTATTGCTGGTGGCACAATTAAGGGTTATGGTTGTCCTGGTCTTTCCATAACTGGAAGTGCTGTTGCTACAGCAGAAGTTGCTAGAGTTGATGCAAGCTGTTCAACTTTCTATTTGGTTCATTCTTCCTTGGCAATGCTCACTATTGCATTATGTGGGTCTGAAGCTCAGAAGCAAAAGTATTTGCCTTCTTTGGCTCAAATGAAAACTATAGCATGTTGGGTGGGAGGTGGTTGGATCCTTGATGGCCAAAAGAGATGGATAGGAAACAGTACGTTTGCTGATTTGTTGGTTATCTTTGCTAGGAATACGACAACGAATCAAATAAATGGATATATTGTCAAAAAGGATGCACCAGGATTAACAGTAACAAAAATGGAGAATAAAATTGGACTTAGGATCGTACAAAACGGAGACATAGTTATGAGGAAAGTTTTTGTCCCTGATGATGACAGAATAGAAGGAGTAAATTCTTTTCAGGATACAAACAAGGTACCTAAAGGAGAGGAAGCAATTTGGAGCACCATTAGCAGCTTTCCAAATCAGTCAACAAAAACTTGTTCAAATGCTAGGTAACATTCAAGCAATGATTCTTGTTGGTTGGCGTCTGTGCAAGTTGTACGAGAGTGGTAAAATGACTCCAGGTCATGCTAGCTTGGGGAAGTCGTGGATTACCCTGAGGGCAAGAGAAACAGCTGCCTTGGGGAGAGAATTGCTTGGTGGCAATGGAATTTTGGCTGATTTTCTAGTGGCAAAGGCATTCTGTGACATAGAACCTATCTACACCTTCGAAGGCACGTATGACATCAACACCTTGGTTACAGGCAGGGAAGTTACTGGTTTTGCCAGCTTTAAGTCGGTTGCTCAGAAAAGTAGGCTGTGAAAGTGTAAAATGTGTTCCTCTATGGACTAATAGACTTCGTTGGTTTATGTATTTATAATAATATGAATCGAATAACAATCCATAAGCATTAAATAATTATACAAATGTGTTAATAACAAAGCAGGGAAATGAAAATTAATGATCTTGAGATATTCTTCCAGTCCATATCCACGCTTTCACTTCTGATAACTTGTAGATGCTGAATGTTTGAAACTGCTGCTTTAGCATTAGTTATTGTCCTGCTCTTGCTGTGTGAATGAACTTATGAACCCCCTGTGTTGAGGAAAGGGCCAAAAAGACCCCTTAGGGAGAAA
Coding sequences of Glyma.07g151500
>Glyma.07g151500.1 sequence-type=CDS polypeptide=Glyma.07g151500.1.p locus=Glyma.07g151500 ID=Glyma.07g151500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGATGCCTTCGTATTTTAATTTGCCAGCACTTGATGTTTCTGTGGCTTTTCCACAAGCCACTCCAGCCTCTAATTTTCCTCCTTGTGCTTCGGATTATTTTCATTTCAATGACTTGTTGAAACCGGAGGAGCAGGCCGTGAGGAACAAAGTGAGAGAGTGTATGGAAAAAGAAATTGCTCCTATAATGACTGAGTACTGGGAGAAGGCTGAATTCCCATTTCATGTTATCCCAAAGTTTGCTGCCCTGCGTATTGCTGGTGGCACAATTAAGGGTTATGGTTGTCCTGGTCTTTCCATAACTGGAAGTGCTGTTGCTACAGCAGAAGTTGCTAGAGTTGATGCAAGCTGTTCAACTTTCTATTTGGTTCATTCTTCCTTGGCAATGCTCACTATTGCATTATGTGGGTCTGAAGCTCAGAAGCAAAAGTATTTGCCTTCTTTGGCTCAAATGAAAACTATAGCATGTTGGGTGGGAGGTGGTTGGATCCTTGATGGCCAAAAGAGATGGATAGGAAACAGTACGTTTGCTGATTTGTTGGTTATCTTTGCTAGGAATACGACAACGAATCAAATAAATGGATATATTGTCAAAAAGGATGCACCAGGATTAACAGTAACAAAAATGGAGAATAAAATTGGACTTAGGATCGTACAAAACGGAGACATAGTTATGAGGAAAGTTTTTGTCCCTGATGATGACAGAATAGAAGGAGTAAATTCTTTTCAGGATACAAACAAGGTACTTGCTGTTTCACGTGTAATGGTTGCTTGGCAACCTATTGGTTTATCAATGGGCATCTATGATATGTGTCATAGGTACCTAAAGGAGAGGAAGCAATTTGGAGCACCATTAGCAGCTTTCCAAATCAGTCAACAAAAACTTGTTCAAATGCTAGGTAACATTCAAGCAATGATTCTTGTTGGTTGGCGTCTGTGCAAGTTGTACGAGAGTGGTAAAATGACTCCAGGTCATGCTAGCTTGGGGAAGTCGTGGATTACCCTGAGGGCAAGAGAAACAGCTGCCTTGGGGAGAGAATTGCTTGGTGGCAATGGAATTTTGGCTGATTTTCTAGTGGCAAAGGCATTCTGTGACATAGAACCTATCTACACCTTCGAAGGCACGTATGACATCAACACCTTGGTTACAGGCAGGGAAGTTACTGGTTTTGCCAGCTTTAAGTCGGTTGCTCAGAAAAGTAGGCTGTGA

>Glyma.07g151500.2 sequence-type=CDS polypeptide=Glyma.07g151500.2.p locus=Glyma.07g151500 ID=Glyma.07g151500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGATGCCTTCGTATTTTAATTTGCCAGCACTTGATGTTTCTGTGGCTTTTCCACAAGCCACTCCAGCCTCTAATTTTCCTCCTTGTGCTTCGGATTATTTTCATTTCAATGACTTGTTGAAACCGGAGGAGCAGGCCGTGAGGAACAAAGTGAGAGAGTGTATGGAAAAAGAAATTGCTCCTATAATGACTGAGTACTGGGAGAAGGCTGAATTCCCATTTCATGTTATCCCAAAGTTTGCTGCCCTGCGTATTGCTGGTGGCACAATTAAGGGTTATGGTTGTCCTGGTCTTTCCATAACTGGAAGTGCTGTTGCTACAGCAGAAGTTGCTAGAGTTGATGCAAGCTGTTCAACTTTCTATTTGGTTCATTCTTCCTTGGCAATGCTCACTATTGCATTATGTGGGTCTGAAGCTCAGAAGCAAAAGTATTTGCCTTCTTTGGCTCAAATGAAAACTATAGCATGTTGGGTGGGAGGTGGTTGGATCCTTGATGGCCAAAAGAGATGGATAGGAAACAGTACGTTTGCTGATTTGTTGGTTATCTTTGCTAGGAATACGACAACGAATCAAATAAATGGGTACCTAAAGGAGAGGAAGCAATTTGGAGCACCATTAGCAGCTTTCCAAATCAGTCAACAAAAACTTGTTCAAATGCTAGGTAACATTCAAGCAATGATTCTTGTTGGTTGGCGTCTGTGCAAGTTGTACGAGAGTGGTAAAATGACTCCAGGTCATGCTAGCTTGGGGAAGTCGTGGATTACCCTGAGGGCAAGAGAAACAGCTGCCTTGGGGAGAGAATTGCTTGGTGGCAATGGAATTTTGGCTGATTTTCTAGTGGCAAAGGCATTCTGTGACATAGAACCTATCTACACCTTCGAAGGCACGTATGACATCAACACCTTGGTTACAGGCAGGGAAGTTACTGGTTTTGCCAGCTTTAAGTCGGTTGCTCAGAAAAGTAGGCTGTGA

>Glyma.07g151500.3 sequence-type=CDS polypeptide=Glyma.07g151500.3.p locus=Glyma.07g151500 ID=Glyma.07g151500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGATGCCTTCGTATTTTAATTTGCCAGCACTTGATGTTTCTGTGGCTTTTCCACAAGCCACTCCAGCCTCTAATTTTCCTCCTTGTGCTTCGGATTATTTTCATTTCAATGACTTGTTGAAACCGGAGGAGCAGGCCGTGAGGAACAAAGTGAGAGAGTGTATGGAAAAAGAAATTGCTCCTATAATGACTGAGTACTGGGAGAAGGCTGAATTCCCATTTCATGTTATCCCAAAGTTTGCTGCCCTGCGTATTGCTGGTGGCACAATTAAGGGTTATGGTTGTCCTGGTCTTTCCATAACTGGAAGTGCTGTTGCTACAGCAGAAGTTGCTAGAGTTGATGCAAGCTGTTCAACTTTCTATTTGGTTCATTCTTCCTTGGCAATGCTCACTATTGCATTATGTGGGTCTGAAGCTCAGAAGCAAAAGTATTTGCCTTCTTTGGCTCAAATGAAAACTATAGCATGTTGGGTGGGAGGTGGTTGGATCCTTGATGGCCAAAAGAGATGGATAGGAAACAGTACGTTTGCTGATTTGTTGGTTATCTTTGCTAGGAATACGACAACGAATCAAATAAATGGATATATTGTCAAAAAGGATGCACCAGGATTAACAGTAACAAAAATGGAGAATAAAATTGGACTTAGGATCGTACAAAACGGAGACATAGTTATGAGGAAAGTTTTTGTCCCTGATGATGACAGAATAGAAGGAGTAAATTCTTTTCAGGATACAAACAAGGTACCTAAAGGAGAGGAAGCAATTTGGAGCACCATTAGCAGCTTTCCAAATCAGTCAACAAAAACTTGTTCAAATGCTAGGTAA
Predicted protein sequences of Glyma.07g151500
>Glyma.07g151500.1.p sequence-type=predicted peptide transcript=Glyma.07g151500.1 locus=Glyma.07g151500 ID=Glyma.07g151500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKMPSYFNLPALDVSVAFPQATPASNFPPCASDYFHFNDLLKPEEQAVRNKVRECMEKEIAPIMTEYWEKAEFPFHVIPKFAALRIAGGTIKGYGCPGLSITGSAVATAEVARVDASCSTFYLVHSSLAMLTIALCGSEAQKQKYLPSLAQMKTIACWVGGGWILDGQKRWIGNSTFADLLVIFARNTTTNQINGYIVKKDAPGLTVTKMENKIGLRIVQNGDIVMRKVFVPDDDRIEGVNSFQDTNKVLAVSRVMVAWQPIGLSMGIYDMCHRYLKERKQFGAPLAAFQISQQKLVQMLGNIQAMILVGWRLCKLYESGKMTPGHASLGKSWITLRARETAALGRELLGGNGILADFLVAKAFCDIEPIYTFEGTYDINTLVTGREVTGFASFKSVAQKSRL*

>Glyma.07g151500.2.p sequence-type=predicted peptide transcript=Glyma.07g151500.2 locus=Glyma.07g151500 ID=Glyma.07g151500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKMPSYFNLPALDVSVAFPQATPASNFPPCASDYFHFNDLLKPEEQAVRNKVRECMEKEIAPIMTEYWEKAEFPFHVIPKFAALRIAGGTIKGYGCPGLSITGSAVATAEVARVDASCSTFYLVHSSLAMLTIALCGSEAQKQKYLPSLAQMKTIACWVGGGWILDGQKRWIGNSTFADLLVIFARNTTTNQINGYLKERKQFGAPLAAFQISQQKLVQMLGNIQAMILVGWRLCKLYESGKMTPGHASLGKSWITLRARETAALGRELLGGNGILADFLVAKAFCDIEPIYTFEGTYDINTLVTGREVTGFASFKSVAQKSRL*

>Glyma.07g151500.3.p sequence-type=predicted peptide transcript=Glyma.07g151500.3 locus=Glyma.07g151500 ID=Glyma.07g151500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKMPSYFNLPALDVSVAFPQATPASNFPPCASDYFHFNDLLKPEEQAVRNKVRECMEKEIAPIMTEYWEKAEFPFHVIPKFAALRIAGGTIKGYGCPGLSITGSAVATAEVARVDASCSTFYLVHSSLAMLTIALCGSEAQKQKYLPSLAQMKTIACWVGGGWILDGQKRWIGNSTFADLLVIFARNTTTNQINGYIVKKDAPGLTVTKMENKIGLRIVQNGDIVMRKVFVPDDDRIEGVNSFQDTNKVPKGEEAIWSTISSFPNQSTKTCSNAR*






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