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Report for Sequence Feature Glyma.07g151400

Feature Type:gene_model
Chromosome:Gm07
Start:18358899
stop:18370164
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.07g151400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G05570.2AT transducin family protein / WD-40 repeat family protein JGI N/AIEA
GO:0016192GO-bp vesicle-mediated transport EnsemblGenomesN/AIEA
GO:0016192GO-bp vesicle-mediated transport JGI N/AIEA
GO:0017157GO-bp regulation of exocytosis EnsemblGenomesN/AIEA
GO:0043547GO-bp positive regulation of GTPase activity EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0005886GO-cc plasma membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
GO:0005096GO-mf GTPase activator activity EnsemblGenomesN/AIEA
GO:0005515GO-mf protein binding EnsemblGenomesN/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
GO:0017137GO-mf Rab GTPase binding EnsemblGenomesN/AIEA
GO:0019905GO-mf syntaxin binding EnsemblGenomesN/AIEA
KOG1983 KOG Tomosyn and related SNARE-interacting proteins JGI N/AIEA
PTHR10241Panther LETHAL(2) GIANT LARVAE PROTEIN JGI N/AIEA
PTHR10241:SF11Panther JGI N/AIEA
PF00400PFAM WD domain, G-beta repeat JGI N/AIEA
PF00957PFAM Synaptobrevin JGI N/AIEA

Expression Patterns of Glyma.07g151400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.07g151400 not represented in the dataset
Glyma.07g151400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.07g151400
ParalogEvidenceComments
Glyma.18g202700 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.07g151400 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma07g18361 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.07g151400
>Glyma.07g151400.1 sequence-type=CDS polypeptide=Glyma.07g151400.1.p locus=Glyma.07g151400 ID=Glyma.07g151400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTTGCCAAGAGGTTGTTGCACAAGGCTGTGCAGCACCATTCCAACCACAAGTTGCAGCATGGTGGTTTGCAAGGGAGTGAGTTGGATCCCAGAATTGTGATTCACTATGGCATTCCATCCACTGCTTCAGTTCTCGCTTTTGACCCCATTCAGCGACTTTTGGCTATTGGGACTTTGGATGGAAGACTTAAGGTGATTGGGGGTGATAATATAGAAGGACTATTGGTTTCTCCTAAGCAATTGCCTTACAAATACTTGGAGTTCCTTCAAAACCAGGGGCATTTAGTTGGTGTCTTAAATGACAATGATATCCAGGTTTGGAATCTTGAGAGCCGGAGCCTTGTTTGTTCTTTACAATGGGAGTTCGATATTACTGCTTTTTCTGTAATCAGCGGTTCACATTTCATTTATGTTGGAGATCAGCATGGCTTATTTTCTGTGATAAAGTTCGAAGCTGAGGAAGGACAACTTTTGAAGTCATCATACTATTTGTCTGCAAAATTTTTAAGGGAAGCTGCAGGCTTTCCAGAACCCAGTGAGCAACCAATTGTTGGAGTTCTTTTGCAACCTTCTTCTTTCGGGAACAGACTCTTAATTGCGTTTGAGGATGGACTGCTTATTCTTTGGGATGTTTCTGAATCTAGAATTGTGTTTCTTGGTGGTGGAAAAGATCTCCAATTGAAGGATGAAGATGGTAACTCTTCTTCCGAAACGGGCACCAATCCTCCAGCTGATATTGTAGAACAAAATCTAGGTGACAAAGAGATAACTGCTCTTTGCTGGGCATCTTCTACTGGGTCCATTCTTGCCGTGGGATACTTAGATGGAGATATCCTTCTCTGGAACTTGTCATCAGCAACAGCTTCTAAAGGCCAACAAACTTCTAAAAATGTTGTTAAGCTACAACTTTCAACTGCAGAAAGAAGACTCCCAGTCATTGTCTTACAATGGTCCAACAGCCATAAATCCCAAAGTGATAGTTTTGGGCAGTTGTTTGTCTATGGTGGCGATGAAATTGGATCTGAAGAAGTTTTGACTGTTTTAACTCTCGAATGGTCATCCGGGATGGAGTCCGTAAAATGCACCAATCGTGCAGACCTTACACTTAGTGGCTCTTTTGCAGACTTGATTTTACTGCCAAGTCCTGGAACGATGGGGTTGAGCAGCAAAGATGAACTTTTTGTACTGGCAAACCCTGGACAACTACATTTGTATGATAATGATAGCCTTTCCGCATTAACATCTCAGCTGACGAGAACGCCATCCGTTTCTGCTTTGGAGTTTCCAGTGCTAGTACCTATTTCTGATCCATGTTTGACTGTTGCAATACTTATCAGGTTGCCCAGTAACTCAAATTCATCAAAAAATTTCACTGAGGTAGCCTCAGCTCTGAGAACTGGCTCAAGGCATGGATCAGCTCCTTCAAATTGGCCCTTGACTGGGGGTGTTCCCAGTCTGTCATCCACAGCTAAAGGTGCTGTGGTTGAGAGAGTTTATTTTGTGGGTTATTCCAATGGATCTGTCCTTGTGTGTGATGCCACACATGCAGTCTTATCTTATATTTGCTACATAGAGGGAGAAGTGAATGGTATAAAAGTGGCTGGTTCAGATGCTCAAGTGACAAAATTGGACTTCTGCTCTGTTTCTTTACTGTTGGCTGTGGGCAATGAATGTGGTCTTGTTCGCATTTATGACCTCAAAAGCCACTCTGGTGGACGAAATTTCCATTTTTTCACAGAAACAAAAAGTGAAGTTCTTGACACTCCAGAAGGAAAAGGATCTTACTGTAGCGCTGTCTTTTCTGTTCTGGATTCCCCTGTGCAAGCATTATCATTTGCAAATTCTGGAACTAAACTTGCTATTGGATTTTCAAGTGGTAGTATTGCAGTCTGTAATGTGACTTCATTGTCAGTTTTGTTCTTGATTGATGGTGTACCTAGCTCTAGTTCACCAATTACTTCATTGGTTTGGAAACAAGAAGCATATTTTCAAAGTGAAGTGAATAGTTTAAAGCCATCAGAAACAGATTCAGGCAACTCTCTTGAAGAAATACTATTTGTGTTATCCCGGGATGGAAAAATTAATATAGTTGATGGTGATAGTGGAAAAATTATCTGCAGTCGGCCATTACAAGTGAAGGAATCCACTGCAATTTCAATGTATGTTATAGAGGGTAGCATCTCAGCATCTGAAGCATCAAATGACAAGCTGCAGGAAGAAACTGTGAAGAATACTGCTGATGCTAGCCCTGATGAGGAGGAAGAACCCTTATCAACTAGGGTAAATTCATCAGAAGCTGGTCTTTCCTCTTCAGAAAGCTCACACTCTGGAGATTTGCTGTTGGATCCACTTGTTCTGCTATGCTGCGAGAATTCATTGCGTTTGTTCTCTGCAAAATCTTTGATACAGGGACATAAGAGACCAATTAAAAAAGTGAAACATTCTAAATCTTGTTATTGGACTACAATTTTTAAGAAAGATGGCAAAGTTTATGGGCTTTTATCATTGCTTCAGACTGGAACATTTGAAATCAGGTCTTTACCAGATTTGGAATTGGTTGCAGAAAGCTCTTTATTGTCAATTTTAAGATGGAATTATAAAGTGAATATGGATAAAACCATGTGTTCTGATGATTATGGAGAGATAGTGCTGGCTAACAGTTCTGAATTGGCCTTCATGTCATTACTGGCTGGCAAAGATGAATTCAGTAATCTGGAGCATCTGCCTTGTCTTCACGATAAAGTTCTTGCAGCCGCTGCTGATGCTGCCTTTAAATTCTCTTCAAATCAGAAGAAAAAACAGACTGTGGTGCCGGGGATTCTAGGTGGTATTGTCAAAGGGTTTAAAGGAGGAAAAACCACTCCAACAGATGTGACTAAAATTCCAACCTCCAATTTTGGTCATTTGGAAGACATTTTCTTTAAGCCCCCCTTGCCTGATTCCCCTACAACAGTGGCAATCCCAGATAAGAAAGAAGCGGAGCTTGATATAGATGACATTGAAATAGACGAGCCCCATCAGCCCATACCTAAGGCTTCTACTTCCTCTCCTGATGTTAAAAATAAACAGAAAGATAAGTTACAAGATAGGGAGAAACTATTTGAAGGTGGGACCAACAATGATGATTTAAAGCCAAGACTTAGAAAACCTGAAGAAATTATGGCTACTTATAGAAAAACTGAGGATGCTGCTTCAGTTGCTGCCCAAGCAAGAAACAAGCTTATGGAGAGGCATGAAAAATTGGAGAGAATCAGCCAACGTACTGCTGAACTGCAAAGTGGAGCTGAAAATTTTGCGTCATTAGCAAATGAGCTTGTTAAGACCATGGAAAGGAGGAAATGGTGGCAAATATAG
Predicted protein sequences of Glyma.07g151400
>Glyma.07g151400.1.p sequence-type=predicted peptide transcript=Glyma.07g151400.1 locus=Glyma.07g151400 ID=Glyma.07g151400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MFAKRLLHKAVQHHSNHKLQHGGLQGSELDPRIVIHYGIPSTASVLAFDPIQRLLAIGTLDGRLKVIGGDNIEGLLVSPKQLPYKYLEFLQNQGHLVGVLNDNDIQVWNLESRSLVCSLQWEFDITAFSVISGSHFIYVGDQHGLFSVIKFEAEEGQLLKSSYYLSAKFLREAAGFPEPSEQPIVGVLLQPSSFGNRLLIAFEDGLLILWDVSESRIVFLGGGKDLQLKDEDGNSSSETGTNPPADIVEQNLGDKEITALCWASSTGSILAVGYLDGDILLWNLSSATASKGQQTSKNVVKLQLSTAERRLPVIVLQWSNSHKSQSDSFGQLFVYGGDEIGSEEVLTVLTLEWSSGMESVKCTNRADLTLSGSFADLILLPSPGTMGLSSKDELFVLANPGQLHLYDNDSLSALTSQLTRTPSVSALEFPVLVPISDPCLTVAILIRLPSNSNSSKNFTEVASALRTGSRHGSAPSNWPLTGGVPSLSSTAKGAVVERVYFVGYSNGSVLVCDATHAVLSYICYIEGEVNGIKVAGSDAQVTKLDFCSVSLLLAVGNECGLVRIYDLKSHSGGRNFHFFTETKSEVLDTPEGKGSYCSAVFSVLDSPVQALSFANSGTKLAIGFSSGSIAVCNVTSLSVLFLIDGVPSSSSPITSLVWKQEAYFQSEVNSLKPSETDSGNSLEEILFVLSRDGKINIVDGDSGKIICSRPLQVKESTAISMYVIEGSISASEASNDKLQEETVKNTADASPDEEEEPLSTRVNSSEAGLSSSESSHSGDLLLDPLVLLCCENSLRLFSAKSLIQGHKRPIKKVKHSKSCYWTTIFKKDGKVYGLLSLLQTGTFEIRSLPDLELVAESSLLSILRWNYKVNMDKTMCSDDYGEIVLANSSELAFMSLLAGKDEFSNLEHLPCLHDKVLAAAADAAFKFSSNQKKKQTVVPGILGGIVKGFKGGKTTPTDVTKIPTSNFGHLEDIFFKPPLPDSPTTVAIPDKKEAELDIDDIEIDEPHQPIPKASTSSPDVKNKQKDKLQDREKLFEGGTNNDDLKPRLRKPEEIMATYRKTEDAASVAAQARNKLMERHEKLERISQRTAELQSGAENFASLANELVKTMERRKWWQI*






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