SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.07g144300

Feature Type:gene_model
Chromosome:Gm07
Start:17068306
stop:17072484
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.07g144300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G01160.1AT JGI N/AIEA
K15685KEGG Ubiquitin system JGI N/AIEA
KOG2932 KOG E3 ubiquitin ligase involved in ubiquitination of E-cadherin complex JGI N/AIEA
PTHR13480PantherFam E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED JGI N/AIEA

Gene model name correspondences to Glyma.07g144300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma07g17390 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.07g144300
>Glyma.07g144300.1 sequence-type=CDS polypeptide=Glyma.07g144300.1.p locus=Glyma.07g144300 id=Glyma.07g144300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTTCAGATTCGGCTTAGTAAGGCTCCTGCATCAGAAGGTTCGGCAGGGTTGAAGCTGTCGCCGGTTGAGACTGTTACAGTTGCGTGCCCCGATCATCTTGTCCTTGCTGATCTTCCAGTTGCAAAGGGCATTGGCGCCGCCACTGTTGCCTCCCTTGTTAAGACTTTGGGCCGTAGATCTCGCCGCCAGCTTGGCGAGCGAGTCCATTTCTGTGTTCGCTGTGATTTCCCGATCGCTGTTTATGGACGCCTGAGCCCTTGTGAGCATGCCTTTTGTCTGGATTGTGCTAGAAGTGATTCAATGTGCTACCTGTGTGATGATCGAATCCAGAAGATTCAAACAATAAAAATGATGGAAGGAATCCTCATTTGTGCAGCTCCTCACTGTCTCAAGTCTTTCTTGAAGAAAGCTGATTTTGAATCTCATATCCAAGACAGCCACGCCAGCCTTCTTCGACCCAATGCAGATAAAGAAGATGGAAATGAGTCGGAGGCACAGAGTGTTAGGCAATCGACAGCCTCAGATTCCACTGCTCGAGGTCCCCAAAGACCAGTTTTTTCTCCTGGTTCAAATTCCCAGCAACATGATCTGGAAGAGAAATCTCGTAGACAGACACCTAGAGAGCAACCACCTTCAAGGCAAACCATGCAGCCAAAGCCACCATATTATAGTCAACAACAACACCCTTCCGATACCATGTCTGGCTCTGTTGGAGGTGGACAACAGGGCTTTCATCAACAAAGTTTTGACATACAGCATCCCCCACAAGAATCTTCCCAGTTTGCTGACAGACAACAAGCAGTTGGTCCAGAGACCCCATTTCCTGAGTATCCAACAATGCACCCAGCACAACCTTCCAATGTTCCCTCACTGGTTACTTCAAACCCAATGCTGAACCCTCCCATGCCATTTGGTTATCCCCCATACCCAAACGAACGAGCTCAGCCATTTTATGGTGCTCCATATGATATGCCTAGGCAGGACTCGGGTTCTGATATAGGTGGGGACCAAAGTTCATTACTGGGTTTCCCACAAGGTGTCCCAAGTGGCCCAAATTTTCCAGGAAATTATCTCCAGCCCTGGAATTCAGGAATGGGTGGTGTGCCTTTTGAACAAGCGCAGGGTGGTATGGTCGTGGATCCAAGGGAGGGCAAAGGTATATTGGCACCACAGCCCATGCCCCTCCCACCGCCACCTCCACCTCCATCCCACATGTCACATGGGAAACAGAACTACTATTCTGGGGAGGTTGGGCATGATGGTCAGGGTTATGGGTGGCAGCATGATAACCGTGATAACTTTGGTAACCAAGTCTAG
Predicted protein sequences of Glyma.07g144300
>Glyma.07g144300.1.p sequence-type=predicted peptide transcript=Glyma.07g144300.1 locus=Glyma.07g144300 id=Glyma.07g144300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLQIRLSKAPASEGSAGLKLSPVETVTVACPDHLVLADLPVAKGIGAATVASLVKTLGRRSRRQLGERVHFCVRCDFPIAVYGRLSPCEHAFCLDCARSDSMCYLCDDRIQKIQTIKMMEGILICAAPHCLKSFLKKADFESHIQDSHASLLRPNADKEDGNESEAQSVRQSTASDSTARGPQRPVFSPGSNSQQHDLEEKSRRQTPREQPPSRQTMQPKPPYYSQQQHPSDTMSGSVGGGQQGFHQQSFDIQHPPQESSQFADRQQAVGPETPFPEYPTMHPAQPSNVPSLVTSNPMLNPPMPFGYPPYPNERAQPFYGAPYDMPRQDSGSDIGGDQSSLLGFPQGVPSGPNFPGNYLQPWNSGMGGVPFEQAQGGMVVDPREGKGILAPQPMPLPPPPPPPSHMSHGKQNYYSGEVGHDGQGYGWQHDNRDNFGNQV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo