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Report for Sequence Feature Glyma.07g133500

Feature Type:gene_model
Chromosome:Gm07
Start:15809992
stop:15813498
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.07g133500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G02230.1AT Haloacid dehalogenase-like hydrolase (HAD) superfamily protein JGI N/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0016787GO-mf hydrolase activity EnsemblGenomesN/AIEA
KOG3109 KOG Haloacid dehalogenase-like hydrolase JGI N/AIEA
PTHR12725Panther HALOACID DEHALOGENASE-LIKE HYDROLASE JGI N/AIEA
PTHR12725:SF15Panther JGI N/AIEA
PTHR18901Panther 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 JGI N/AIEA
PWY-7204SoyCyc9 pyridoxal 5'-phosphate salvage II (plants) Plant Metabolic Network ISS
GN7V-65276SoyCyc9-rxn pyridoxal phosphatase Plant Metabolic Network ISS

Expression Patterns of Glyma.07g133500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.07g133500
ParalogEvidenceComments
Glyma.18g182800 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.07g133500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma07g16020 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.07g133500
>Glyma.07g133500.2 sequence-type=transcript locus=Glyma.07g133500 ID=Glyma.07g133500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AATTAATCTAATATTATAGCCATATAAGCCAATGGTGCACTTGTCCATCTATAAATACTCATCATTGCCTTAGCTTTTTTCCTCCCCCTCCTCCTTTCATCTTTCAATACAATATTGCTCTCTAAGCTTTGATTCTTCTTAATTCATACCCTTCCCACACTCATTCATTGTTGTGCGTCTGGTTTTCTGCCTGAAATGGAGTACATGAACCAGAGACCAAAATATGATTGCCTTCTTTTTGatttagatgatactttgtatccactaagcactggtcttgcaaaagcatgtggccaaaacattaaagACTATATGGCCGAAAAGCTTGGCATAGAGAAAAGCAAAATTGATGACTTGTCCAACCTCCTCTACAAGAACTATGGAACAACTATGGCTGGTTTAAGGGCAATTGGATATGACTTTGACTACGATGAATATCACAGTTTTGTTCATGGGAGATTACCTTATGAGAATTTGAAACCAGACCCAGTTCTGAGGAACCTCTTGCTGAGCCTACCCTATAGGAGACTGATCTTCACAAACTCAGACAAAGTCCATGCAGTTAAGGCACTAAGCAGGCTAGGATTAGAAGACTGCTTTGAAGGAATCATATGCTTTGAGACCCTTAATCCCATCCACAAAAGCACTGTCTCTGATGATGAAGATGACATTGAATTTGTGGGGGGTTCAGGCACAACCAATCCAACCACAAAAAAAGATGCTAGCAGCTTTCAAATCTTTGACATCATTGGCCATTTTGCTCAACCCAATCCCCACACAGTTTTGCCAAAGACACCAATTATTTGCAAACCATCAGAAAATGCCATTGAGTTGGCCCTCAAGATAGCCAACCTTAATCCACAAAGAACTTTGTTCTTTGAGGATAGTGTCCGCAACACACAAGCTGGAAAACGTGTGGGTCTTCACACTGTGCTGGTTGGAAAATCTCAGAGAATTAAAGGAGCAGATTATGCATTAGAAAGCATCCACAACCTTAGGGAGGCAGTGCCAGAACTATGGGAAGATGACATAAAATCAGAAGTTGCTTATCCTGGCAAGCTTGCTGTGGAGACATCTGTGACTGCTTAGATCATTGATGaacaaaaaaataaaataaaaaaataagaaaaaGAGAGAGAAAGAGAGAAGTCCTTTGTGAATTTCCCGAGTTGGGATGTAGTAATTGTATGTAGTTGATGTAGATGCTTTGATCATATTACAATTATAATAAAATAATATGTGTAGTTGACGTAGATGCTTTGATAAGATAATAATAAAAAATTAATATAAAATATTAAATTCTCCA

>Glyma.07g133500.3 sequence-type=transcript locus=Glyma.07g133500 ID=Glyma.07g133500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AATTAATCTAATATTATAGCCATATAAGCCAATGGTGCACTTGTCCATCTATAAATACTCATCATTGCCTTAGCTTTTTTCCTCCCCCTCCTCCTTTCATCTTTCAATACAATATTGCTCTCTAAGCTTTGATTCTTCTTAATTCATACCCTTCCCACACTCATTCATTGTTGTGCGTCTGGTTTTCTGCCTGAAATGGAGTACATGAACCAGAGACCAAAATATGATTGCCTTCTTTTTGatttagatgatactttgtatccactaagcactggtcttgcaaaagcatgtggccaaaacattaaagACTATATGGCCGAAAAGCTTGGCATAGAGAAAAGCAAAATTGATGACTTGTCCAACCTCCTCTACAAGAACTATGGAACAACTATGGCTGGTTTAAGGGCAATTGGATATGACTTTGACTACGATGAATATCACAGTTTTGTTCATGGGAGATTACCTTATGAGAATTTGAAACCAGACCCAGTTCTGAGGAACCTCTTGCTGAGCCTACCCTATAGGAGACTGATCTTCACAAACTCAGACAAAGTCCATGCAGTTAAGGCACTAAGCAGGCTAGGATTAGAAGACTGCTTTGAAGGAATCATATGCTTTGAGACCCTTAATCCCATCCACAAAAGCACTGTCTCTGATGATGAAGATGACATTGAATTTGTGGGGGGTTCAGGCACAACCAATCCAACCACAAAAAAAGATGCTAGCAGCTTTCAAATCTTTGACATCATTGGCCATTTTGCTCAACCCAATCCCCACACAGTTTTGCCAAAGACACCAATTATTTGCAAACCATCAGAAAATGCCATTGAGTTGGCCCTCAAGATAGCCAACCTTAATCCACAAAGAACTTTGTTCTTTGAGGATAGTGTCCGCAACACACAAGCTGGAAAACGTGTGGGTCTTCACACTGTGCTGGTAAGTCATTGGTAGTTTTGTTCAGTAGTAGGAACACTGCCAAACGAATAATGAGGAATCCAAGAATTTTAAGGTGTGGAACTTCACACACATATAATTATGGGGGATACAATGAGAAATTATCAGATAGCTAATTTTTATGTGATTTGTAATTAAGTTTTTTAATTTATGGGAGAAAAAATTAATAACACTTCATTATGTGTTATGTATAAAATAATTGTGATCAAAGGAGTACTAACAACACTCTCTAATACACACTCTATTATTAGTTTAAATTTATTAAAAAAAATTTACAAAATCAAGATAAAAATTTGTTAGTAAAAAAAATGAGATATATCAAATTTTTGTGAATCTCAAGAAATTTTGATACGTAATAAAAAAATGTGTTGAAAAAAGTATCTTAAAGAATATGTTAACATTTCTTTTTGAGAATGTAATAACTTCTCAAGTAAAACACACAATATCCACATAACACATGTAGTATTATGAATAAAAAGAAAAAAAAAATTGTGGGGATAGTTGCTCCCACAAGGCAATCCTTATTGCGTGCCAAACTTATATGAGCCTCTAATTTATTGATTACTACTTTTAGGTTGGAAAATCTCAGAGAATTAAAGGAGCAGATTATGCATTAGAAAGCATCCACAACCTTAGGGAGGCAGTGCCAGAACTATGGGAAGATGACATAAAATCAGAAGTTGCTTATCCTGGCAAGCTTGCTGTGGAGACATCTGTGACTGCTTAGATCATTGATGaacaaaaaaataaaataaaaaaataagaaaaaGAGAGAGAAAGAGAGAAGTCCTTTGTGAATTTCCCGAGTTGGGATGTAGTAATTGTATGTAGTTGATGTAGATGCTTTGATCATATTACAATTATAATAAAATAATATGTGTAGTTGACGTAGATGCTTTGATAAGATAATAATAAAAAATTAATATAAAATATTAAATTCTCCA
Coding sequences of Glyma.07g133500
>Glyma.07g133500.1 sequence-type=CDS polypeptide=Glyma.07g133500.1.p locus=Glyma.07g133500 ID=Glyma.07g133500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGTACATGAACCAGAGACCAAAATATGATTGCCTTCTTTTTGATTTAGATGATACTTTGTATCCACTAAGCACTGGTCTTGCAAAAGCATGTGGCCAAAACATTAAAGACTATATGGCCGAAAAGCTTGGCATAGAGAAAAGCAAAATTGATGACTTGTCCAACCTCCTCTACAAGAACTATGGAACAACTATGGCTGGTTTAAGGGCAATTGGATATGACTTTGACTACGATGAATATCACAGTTTTGTTCATGGGAGATTACCTTATGAGAATTTGAAACCAGACCCAGTTCTGAGGAACCTCTTGCTGAGCCTACCCTATAGGAGACTGATCTTCACAAACTCAGACAAAGTCCATGCAGTTAAGGCACTAAGCAGGCTAGGATTAGAAGACTGCTTTGAAGGAATCATATGCTTTGAGACCCTTAATCCCATCCACAAAAGCACTGTCTCTGATGATGAAGATGACATTGAATTTGTGGGGGGTTCAGGCACAACCAATCCAACCACAAAAAAAGATGCTAGCAGCTTTCAAATCTTTGACATCATTGGCCATTTTGCTCAACCCAATCCCCACACAGTTTTGCCAAAGACACCAATTATTTGCAAACCATCAGAAAATGCCATTGAGTTGGCCCTCAAGATAGCCAACCTTAATCCACAAAGAACTTTGTTCTTTGAGGATAGTGTCCGCAACACACAAGCTGGAAAACGTGTGGGTCTTCACACTGTGCTGGTTGGAAAATCTCAGAGAATTAAAGGAGCAGATTATGCATTAGAAAGCATCCACAACCTTAGGGAGGCAGTGCCAGAACTATGGGAAGATGACATAAAATCAGAAGTTGCTTATCCTGGCAAGCTTGCTGTGGAGACATCTGTGACTGCTTAG

>Glyma.07g133500.2 sequence-type=CDS polypeptide=Glyma.07g133500.2.p locus=Glyma.07g133500 ID=Glyma.07g133500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGTACATGAACCAGAGACCAAAATATGATTGCCTTCTTTTTGATTTAGATGATACTTTGTATCCACTAAGCACTGGTCTTGCAAAAGCATGTGGCCAAAACATTAAAGACTATATGGCCGAAAAGCTTGGCATAGAGAAAAGCAAAATTGATGACTTGTCCAACCTCCTCTACAAGAACTATGGAACAACTATGGCTGGTTTAAGGGCAATTGGATATGACTTTGACTACGATGAATATCACAGTTTTGTTCATGGGAGATTACCTTATGAGAATTTGAAACCAGACCCAGTTCTGAGGAACCTCTTGCTGAGCCTACCCTATAGGAGACTGATCTTCACAAACTCAGACAAAGTCCATGCAGTTAAGGCACTAAGCAGGCTAGGATTAGAAGACTGCTTTGAAGGAATCATATGCTTTGAGACCCTTAATCCCATCCACAAAAGCACTGTCTCTGATGATGAAGATGACATTGAATTTGTGGGGGGTTCAGGCACAACCAATCCAACCACAAAAAAAGATGCTAGCAGCTTTCAAATCTTTGACATCATTGGCCATTTTGCTCAACCCAATCCCCACACAGTTTTGCCAAAGACACCAATTATTTGCAAACCATCAGAAAATGCCATTGAGTTGGCCCTCAAGATAGCCAACCTTAATCCACAAAGAACTTTGTTCTTTGAGGATAGTGTCCGCAACACACAAGCTGGAAAACGTGTGGGTCTTCACACTGTGCTGGTTGGAAAATCTCAGAGAATTAAAGGAGCAGATTATGCATTAGAAAGCATCCACAACCTTAGGGAGGCAGTGCCAGAACTATGGGAAGATGACATAAAATCAGAAGTTGCTTATCCTGGCAAGCTTGCTGTGGAGACATCTGTGACTGCTTAG

>Glyma.07g133500.3 sequence-type=CDS polypeptide=Glyma.07g133500.3.p locus=Glyma.07g133500 ID=Glyma.07g133500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGTACATGAACCAGAGACCAAAATATGATTGCCTTCTTTTTGATTTAGATGATACTTTGTATCCACTAAGCACTGGTCTTGCAAAAGCATGTGGCCAAAACATTAAAGACTATATGGCCGAAAAGCTTGGCATAGAGAAAAGCAAAATTGATGACTTGTCCAACCTCCTCTACAAGAACTATGGAACAACTATGGCTGGTTTAAGGGCAATTGGATATGACTTTGACTACGATGAATATCACAGTTTTGTTCATGGGAGATTACCTTATGAGAATTTGAAACCAGACCCAGTTCTGAGGAACCTCTTGCTGAGCCTACCCTATAGGAGACTGATCTTCACAAACTCAGACAAAGTCCATGCAGTTAAGGCACTAAGCAGGCTAGGATTAGAAGACTGCTTTGAAGGAATCATATGCTTTGAGACCCTTAATCCCATCCACAAAAGCACTGTCTCTGATGATGAAGATGACATTGAATTTGTGGGGGGTTCAGGCACAACCAATCCAACCACAAAAAAAGATGCTAGCAGCTTTCAAATCTTTGACATCATTGGCCATTTTGCTCAACCCAATCCCCACACAGTTTTGCCAAAGACACCAATTATTTGCAAACCATCAGAAAATGCCATTGAGTTGGCCCTCAAGATAGCCAACCTTAATCCACAAAGAACTTTGTTCTTTGAGGATAGTGTCCGCAACACACAAGCTGGAAAACGTGTGGGTCTTCACACTGTGCTGGTAAGTCATTGGTAG
Predicted protein sequences of Glyma.07g133500
>Glyma.07g133500.1.p sequence-type=predicted peptide transcript=Glyma.07g133500.1 locus=Glyma.07g133500 ID=Glyma.07g133500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEYMNQRPKYDCLLFDLDDTLYPLSTGLAKACGQNIKDYMAEKLGIEKSKIDDLSNLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRNLLLSLPYRRLIFTNSDKVHAVKALSRLGLEDCFEGIICFETLNPIHKSTVSDDEDDIEFVGGSGTTNPTTKKDASSFQIFDIIGHFAQPNPHTVLPKTPIICKPSENAIELALKIANLNPQRTLFFEDSVRNTQAGKRVGLHTVLVGKSQRIKGADYALESIHNLREAVPELWEDDIKSEVAYPGKLAVETSVTA*

>Glyma.07g133500.2.p sequence-type=predicted peptide transcript=Glyma.07g133500.2 locus=Glyma.07g133500 ID=Glyma.07g133500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEYMNQRPKYDCLLFDLDDTLYPLSTGLAKACGQNIKDYMAEKLGIEKSKIDDLSNLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRNLLLSLPYRRLIFTNSDKVHAVKALSRLGLEDCFEGIICFETLNPIHKSTVSDDEDDIEFVGGSGTTNPTTKKDASSFQIFDIIGHFAQPNPHTVLPKTPIICKPSENAIELALKIANLNPQRTLFFEDSVRNTQAGKRVGLHTVLVGKSQRIKGADYALESIHNLREAVPELWEDDIKSEVAYPGKLAVETSVTA*

>Glyma.07g133500.3.p sequence-type=predicted peptide transcript=Glyma.07g133500.3 locus=Glyma.07g133500 ID=Glyma.07g133500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEYMNQRPKYDCLLFDLDDTLYPLSTGLAKACGQNIKDYMAEKLGIEKSKIDDLSNLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRNLLLSLPYRRLIFTNSDKVHAVKALSRLGLEDCFEGIICFETLNPIHKSTVSDDEDDIEFVGGSGTTNPTTKKDASSFQIFDIIGHFAQPNPHTVLPKTPIICKPSENAIELALKIANLNPQRTLFFEDSVRNTQAGKRVGLHTVLVSHW*






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