Report for Sequence Feature Glyma.07g132400
Feature Type: gene_model
Chromosome: Gm07
Start: 15640604
stop: 15643664
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.07g132400
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G37630.1 AT
myb-like HTH transcriptional regulator family protein
JGI N/A IEA
GO:0006351 GO-bp
transcription, DNA-templated
EnsemblGenomes N/A IEA
GO:0010338 GO-bp
leaf formation
EnsemblGenomes N/A IEA
GO:0005634 GO-cc
nucleus
EnsemblGenomes N/A IEA
GO:0003677 GO-mf
DNA binding
EnsemblGenomes N/A IEA
GO:0003682 GO-mf
chromatin binding
JGI N/A IEA
KOG0048
KOG
Transcription factor, Myb superfamily
JGI N/A IEA
PTHR10641 Panther
MYB-LIKE DNA-BINDING PROTEIN MYB
JGI N/A IEA
PF00249 PFAM
Myb-like DNA-binding domain
JGI N/A IEA
Proteins Associated with Glyma.07g132400
Locus Gene Symbol Protein Name
PHANa phantastica transcription factor a
Expression Patterns of Glyma.07g132400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.07g132400
Paralog Evidence Comments
Glyma.18g181300 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.07g132400 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma07g15850 Wm82.a1.v1.1 IGC As supplied by JGI
Transcripts of Glyma.07g132400
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.07g132400.2 sequence-type=transcript locus=Glyma.07g132400 ID=Glyma.07g132400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TCTCTCCATGTCTTGTCTTATCACGCTTTCCTCTCTCTCTGGTCCATTTTTACTTCACTTCTCTGTCTTTACTCCAACACTCTCTCCAACCTCGGTTTCCACTTTCTCTCTGTTTAAGAACTCACCACTTCTTCAACTTGGTGCCGTTGTTTCATGGACCAGAACAACGCCTCATAGCTCCTTTCTCATTTCACACACACAAAGAACCTTGAGACATCATGAAGATTCCAAGTTCCAAGCAACTGGTTGTGGGATTTGCACTTGGAAATGAAGGATAGGCAACGTTGGAGAGCTGAAGAGGATGCTTTACTACGCGCATATGTCAAACAGTATGGTCCTAGGGAATGGAATCTGGTGTCTCAGCGCATGAACACACCTCTTAACAGGGATGCCAAGTCATGCTTAGAAAGGTGGAAGAACTACCTCAAGCCCGGCATTAAGAAAGGATCTCTTACAGAGGAAGAGCAGCGTCTAGTCATCAACCTTCAAGCAACACACGGCAACAAGTGGAAGAAAATTGCAGCACAAGTCCCTGGTCGCACAGCAAAGAGGTTAGGGAAGTGGTGGGAAGTGTTCAAAGAGAAGCAGCAAAGGGAAACAAAGGGGAATAACTGCACCATTGACCCAATTAACGATAGCAAGTACGAGCATATCCTTGAGAGTTTTGCAGAGAAGCTAGTGAAAGAAAGGCCTTCAACATCAACATCAACATCATTTGTTATGGCTACTTCCAACAGTTCTTTTCTGCATGCTGATGCACCGGCTCCTGCACCAGCCTTGCTTCCGTCTTGGCTTTCCAATTCCAATGGCACTGCACCTGTGAGGCCACCCTCCCCTTCTGTGACTCTTAGTCTTTCTCCCTCGACGGTGGCAGCGCCTCCTCCATGGATGCAGCCCCCCGTCAGAGGACAGGACAATGCTAGTCCTCTTGTTTTGGGGAATGTGGCGCCTCACGGGGCCGTTCTAGCATTTGGTGAGAACATGGTGATGTCTGAGCTAGTGGAGTGCTGCAAGGAGTTGGATGAAGTGCATCATGCTTTGGCCGGGCATAAGAAGGAGGCAGCATGGCGGTTAAGCAGGGTGGAGCTGCAGTTGGAGTCTGAGAAGGCTGGGCGAAGGAGGGAGAAGATGGAGGAAATCGAAGCGAAAATCAAAGCTCTGAGGGAGGAGCAAACGGCTGCATTGGATAGAATTGAAGCAGAATATAGGGAGCAGTTGGCAGGGCTGAGAAGAGATGCTGAAAGCAAGGAGCAAAAGTTGGCTGAACAATGGGCTGCAAAACACTTGCGACTTACTAAGTTTCTAGAACAGGTAGGGTGCAGATCAAGGCTCACTGAACCAAATGGAAGATAGAGTGACATCAATCATTCACAAATTGGGAAAATCTAGTTTGCTTTTACTTATTATTATGTCTTGAATTTATATGATATGAACTTTATAGTCATAGTAGTTTTGTTCCTGTCATTTTTCTAAAATATGTTGTTACATATGGTTATTGATATCATCCCTATCTTTTCATACAACTTGAGGACTTGCATTAGCGGTTGAGTTATGTTTAAATATAACATCCTTTATGAATATGAACTTTGTTGTTATTCAAATTTGCC
Coding sequences of Glyma.07g132400
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.07g132400.1 sequence-type=CDS polypeptide=Glyma.07g132400.1.p locus=Glyma.07g132400 ID=Glyma.07g132400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGGATAGGCAACGTTGGAGAGCTGAAGAGGATGCTTTACTACGCGCATATGTCAAACAGTATGGTCCTAGGGAATGGAATCTGGTGTCTCAGCGCATGAACACACCTCTTAACAGGGATGCCAAGTCATGCTTAGAAAGGTGGAAGAACTACCTCAAGCCCGGCATTAAGAAAGGATCTCTTACAGAGGAAGAGCAGCGTCTAGTCATCAACCTTCAAGCAACACACGGCAACAAGTGGAAGAAAATTGCAGCACAAGTCCCTGGTCGCACAGCAAAGAGGTTAGGGAAGTGGTGGGAAGTGTTCAAAGAGAAGCAGCAAAGGGAAACAAAGGGGAATAACTGCACCATTGACCCAATTAACGATAGCAAGTACGAGCATATCCTTGAGAGTTTTGCAGAGAAGCTAGTGAAAGAAAGGCCTTCAACATCAACATCAACATCATTTGTTATGGCTACTTCCAACAGTTCTTTTCTGCATGCTGATGCACCGGCTCCTGCACCAGCCTTGCTTCCGTCTTGGCTTTCCAATTCCAATGGCACTGCACCTGTGAGGCCACCCTCCCCTTCTGTGACTCTTAGTCTTTCTCCCTCGACGGTGGCAGCGCCTCCTCCATGGATGCAGCCCCCCGTCAGAGGACAGGACAATGCTAGTCCTCTTGTTTTGGGGAATGTGGCGCCTCACGGGGCCGTTCTAGCATTTGGTGAGAACATGGTGATGTCTGAGCTAGTGGAGTGCTGCAAGGAGTTGGATGAAGTGCATCATGCTTTGGCCGGGCATAAGAAGGAGGCAGCATGGCGGTTAAGCAGGGTGGAGCTGCAGTTGGAGTCTGAGAAGGCTGGGCGAAGGAGGGAGAAGATGGAGGAAATCGAAGCGAAAATCAAAGCTCTGAGGGAGGAGCAAACGGCTGCATTGGATAGAATTGAAGCAGAATATAGGGAGCAGTTGGCAGGGCTGAGAAGAGATGCTGAAAGCAAGGAGCAAAAGTTGGCTGAACAATGGGCTGCAAAACACTTGCGACTTACTAAGTTTCTAGAACAGGTAGGGTGCAGATCAAGGCTCACTGAACCAAATGGAAGATAG
>Glyma.07g132400.2 sequence-type=CDS polypeptide=Glyma.07g132400.2.p locus=Glyma.07g132400 ID=Glyma.07g132400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGGATAGGCAACGTTGGAGAGCTGAAGAGGATGCTTTACTACGCGCATATGTCAAACAGTATGGTCCTAGGGAATGGAATCTGGTGTCTCAGCGCATGAACACACCTCTTAACAGGGATGCCAAGTCATGCTTAGAAAGGTGGAAGAACTACCTCAAGCCCGGCATTAAGAAAGGATCTCTTACAGAGGAAGAGCAGCGTCTAGTCATCAACCTTCAAGCAACACACGGCAACAAGTGGAAGAAAATTGCAGCACAAGTCCCTGGTCGCACAGCAAAGAGGTTAGGGAAGTGGTGGGAAGTGTTCAAAGAGAAGCAGCAAAGGGAAACAAAGGGGAATAACTGCACCATTGACCCAATTAACGATAGCAAGTACGAGCATATCCTTGAGAGTTTTGCAGAGAAGCTAGTGAAAGAAAGGCCTTCAACATCAACATCAACATCATTTGTTATGGCTACTTCCAACAGTTCTTTTCTGCATGCTGATGCACCGGCTCCTGCACCAGCCTTGCTTCCGTCTTGGCTTTCCAATTCCAATGGCACTGCACCTGTGAGGCCACCCTCCCCTTCTGTGACTCTTAGTCTTTCTCCCTCGACGGTGGCAGCGCCTCCTCCATGGATGCAGCCCCCCGTCAGAGGACAGGACAATGCTAGTCCTCTTGTTTTGGGGAATGTGGCGCCTCACGGGGCCGTTCTAGCATTTGGTGAGAACATGGTGATGTCTGAGCTAGTGGAGTGCTGCAAGGAGTTGGATGAAGTGCATCATGCTTTGGCCGGGCATAAGAAGGAGGCAGCATGGCGGTTAAGCAGGGTGGAGCTGCAGTTGGAGTCTGAGAAGGCTGGGCGAAGGAGGGAGAAGATGGAGGAAATCGAAGCGAAAATCAAAGCTCTGAGGGAGGAGCAAACGGCTGCATTGGATAGAATTGAAGCAGAATATAGGGAGCAGTTGGCAGGGCTGAGAAGAGATGCTGAAAGCAAGGAGCAAAAGTTGGCTGAACAATGGGCTGCAAAACACTTGCGACTTACTAAGTTTCTAGAACAGGTAGGGTGCAGATCAAGGCTCACTGAACCAAATGGAAGATAG
Predicted protein sequences of Glyma.07g132400
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.07g132400.1.p sequence-type=predicted peptide transcript=Glyma.07g132400.1 locus=Glyma.07g132400 ID=Glyma.07g132400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKDRQRWRAEEDALLRAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVINLQATHGNKWKKIAAQVPGRTAKRLGKWWEVFKEKQQRETKGNNCTIDPINDSKYEHILESFAEKLVKERPSTSTSTSFVMATSNSSFLHADAPAPAPALLPSWLSNSNGTAPVRPPSPSVTLSLSPSTVAAPPPWMQPPVRGQDNASPLVLGNVAPHGAVLAFGENMVMSELVECCKELDEVHHALAGHKKEAAWRLSRVELQLESEKAGRRREKMEEIEAKIKALREEQTAALDRIEAEYREQLAGLRRDAESKEQKLAEQWAAKHLRLTKFLEQVGCRSRLTEPNGR*
>Glyma.07g132400.2.p sequence-type=predicted peptide transcript=Glyma.07g132400.2 locus=Glyma.07g132400 ID=Glyma.07g132400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKDRQRWRAEEDALLRAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVINLQATHGNKWKKIAAQVPGRTAKRLGKWWEVFKEKQQRETKGNNCTIDPINDSKYEHILESFAEKLVKERPSTSTSTSFVMATSNSSFLHADAPAPAPALLPSWLSNSNGTAPVRPPSPSVTLSLSPSTVAAPPPWMQPPVRGQDNASPLVLGNVAPHGAVLAFGENMVMSELVECCKELDEVHHALAGHKKEAAWRLSRVELQLESEKAGRRREKMEEIEAKIKALREEQTAALDRIEAEYREQLAGLRRDAESKEQKLAEQWAAKHLRLTKFLEQVGCRSRLTEPNGR*