Glyma.07g115700

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Report for Sequence Feature Glyma.07g115700

Feature Type:	gene_model
Chromosome:	Gm07
Start:	12550508
stop:	12555061
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.07g115700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G02140.1	AT	mago nashi family protein	JGI	N/A	IEA
GO:0008380	GO-bp	RNA splicing	EnsemblGenomes	N/A	IEA
GO:0005634	GO-cc	nucleus	EnsemblGenomes	N/A	IEA
GO:0005634	GO-cc	nucleus	JGI	N/A	IEA
GO:0035145	GO-cc	exon-exon junction complex	EnsemblGenomes	N/A	IEA
KOG3392	KOG	Exon-exon junction complex, Magoh component	JGI	N/A	IEA
PTHR12638	Panther	FAMILY NOT NAMED	JGI	N/A	IEA
PF02792	PFAM	Mago nashi protein	JGI	N/A	IEA

Expression Patterns of Glyma.07g115700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.07g115700 not represented in the dataset	Glyma.07g115700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.07g115700 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma07g13730	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.07g115700

Limit To All Plant Sequences

>Glyma.07g115700.2 sequence-type=transcript locus=Glyma.07g115700 ID=Glyma.07g115700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAGAAAAGAAAAACGTTCGTTAAATACTCATTTGAACTTACACCGCGTGACCTAGCCAAGCCAACACAAAGGGCACAGAAGAGGGTTTCTTTTCGTTTCGTTTCAATGGGGAGCGAAGAGGAGAACGGCGAATTCTACCTGCGATACTACGTCGGGCACAAGGGCAAGTTCGGTCACGAGTTCTTGGAGTTCGAGTTCCGCCCCGACGGGAAGCTCCGCTACGCCAACAACTCCAACTACAAAAACGACACCATCATCCGCAAGGAGGTTTACCTCACCCCCGCCGTTCTCCGCGAGTGCCGTCGCATCATCTCCGAGAGCGAGATTATGAAGGAAGATGATAACAACTGGCCGGAACCTGATCGGGTGGGGCGGCAGGAGCTGGAGATTGTTATGGGGAACGAGCACATTTCGTTTACGACTTCAAAGATTGGGTCTCTTGTTGATGTTCAGAGCAGTGCTGACCCAGAGGGTCTTCGCATCTTTTACTATCTTGTTCAGGATTTGAAGTGCTTTGTCTTCTCTTTGATTTCCCTTCACTTCAAGATCAAGCCTATCTAGGGTGTTTGCAATATTATGCATTCATCCTCTGGGAAATATGTACTTGTTTAGCAACTCTCACTTTTTGCTAATGGAGTTCAGCTTCTGATAGATTGACTTTGTAATCGTGAAATGATTTAGTTCTGTATTGGTGGTTACATGAATTGGAATTTTAGATTTGAGGGTATAGCCCTTGAACTATAAGTGTTGATTGGATTGGTTTTTATGCATGGCTTACTTATTCTTTCTTTCCTTTGCTTTCACCGTTGGATCATCCTAAATGTTGCATCTTGGAATTACTTATTGTCCGTGTGAGATATGTACATGCTAGCTTTTATCAGGATTTCTTTGAGATGGAAAAATATTTTATTTACACAATTTATACAATTCTATTTGAATAAGATTTTAACATTGCACTGGTGGGGAG

Coding sequences of Glyma.07g115700

Limit To All Plant Sequences

>Glyma.07g115700.1 sequence-type=CDS polypeptide=Glyma.07g115700.1.p locus=Glyma.07g115700 ID=Glyma.07g115700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGGAGCGAAGAGGAGAACGGCGAATTCTACCTGCGATACTACGTCGGGCACAAGGGCAAGTTCGGTCACGAGTTCTTGGAGTTCGAGTTCCGCCCCGACGGGAAGCTCCGCTACGCCAACAACTCCAACTACAAAAACGACACCATCATCCGCAAGGAGGTTTACCTCACCCCCGCCGTTCTCCGCGAGTGCCGTCGCATCATCTCCGAGAGCGAGATTATGAAGGAAGATGATAACAACTGGCCGGAACCTGATCGGGTGGGGCGGCAGGAGCTGGAGATTGTTATGGGGAACGAGCACATTTCGTTTACGACTTCAAAGATTGGGTCTCTTGTTGATGTTCAGAGCAGTGCTGACCCAGAGGGTCTTCGCATCTTTTACTATCTTGTTCAGGATTTGAAGTGCTTTGTCTTCTCTTTGATTTCCCTTCACTTCAAGATCAAGCCTATCTAG

>Glyma.07g115700.2 sequence-type=CDS polypeptide=Glyma.07g115700.2.p locus=Glyma.07g115700 ID=Glyma.07g115700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGGAGCGAAGAGGAGAACGGCGAATTCTACCTGCGATACTACGTCGGGCACAAGGGCAAGTTCGGTCACGAGTTCTTGGAGTTCGAGTTCCGCCCCGACGGGAAGCTCCGCTACGCCAACAACTCCAACTACAAAAACGACACCATCATCCGCAAGGAGGTTTACCTCACCCCCGCCGTTCTCCGCGAGTGCCGTCGCATCATCTCCGAGAGCGAGATTATGAAGGAAGATGATAACAACTGGCCGGAACCTGATCGGGTGGGGCGGCAGGAGCTGGAGATTGTTATGGGGAACGAGCACATTTCGTTTACGACTTCAAAGATTGGGTCTCTTGTTGATGTTCAGAGCAGTGCTGACCCAGAGGGTCTTCGCATCTTTTACTATCTTGTTCAGGATTTGAAGTGCTTTGTCTTCTCTTTGATTTCCCTTCACTTCAAGATCAAGCCTATCTAG

Predicted protein sequences of Glyma.07g115700

Limit To All Plant Sequences

>Glyma.07g115700.1.p sequence-type=predicted peptide transcript=Glyma.07g115700.1 locus=Glyma.07g115700 ID=Glyma.07g115700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGSEEENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYLTPAVLRECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSADPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI*

>Glyma.07g115700.2.p sequence-type=predicted peptide transcript=Glyma.07g115700.2 locus=Glyma.07g115700 ID=Glyma.07g115700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGSEEENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYLTPAVLRECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSADPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI*

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