SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.07g112500

Feature Type:gene_model
Chromosome:Gm07
Start:11525766
stop:11532318
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.07g112500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G01710.1AT ARPC5,CRK JGI N/AIEA
GO:0030833GO-bp regulation of actin filament polymerization JGI N/AIEA
GO:0034314GO-bp Arp2/3 complex-mediated actin nucleation JGI N/AIEA
GO:0005885GO-cc Arp2/3 protein complex JGI N/AIEA
GO:0015629GO-cc actin cytoskeleton JGI N/AIEA
PTHR12644PantherFam ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARC JGI N/AIEA
PF04699Pfam ARP2/3 complex 16 kDa subunit (p16-Arc) JGI N/AIEA

Gene model name correspondences to Glyma.07g112500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma07g14260 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.07g112500
>Glyma.07g112500.2 sequence-type=CDS polypeptide=Glyma.07g112500.2.p locus=Glyma.07g112500 id=Glyma.07g112500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAGGAGCAGAAGGGTTCGTTGAAGCAGATAATGCAGAGGCCATAATTACCAGAATTGAACACAAATCCCGCAAGATCGAAACTTTACTCAAACAGTATAAGCCCGTGGAAGCCCTTAAAACTGCCCTTGAAGGCACATATGCGATCATTGGGGATGAGCGTTGCAAGTCGGCTCACTGGCTTGTGGTGCACAGAGCTATAATGGCTATAAAAGATGTGGATGGGATGCTTTCTTCCTTGGATCCTGAGTACTATGATATCCTAATGAAAGGGCGAGCCCTGATGCAGCGGTAA

>Glyma.07g112500.3 sequence-type=CDS polypeptide=Glyma.07g112500.3.p locus=Glyma.07g112500 id=Glyma.07g112500.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATAAAGATTTTTCCACGTGTGCCAACATCATTAAACAAGAGCACATTATTAGGACCCACCTTAACCTTTACGAAGTACTTGCACCGTGAAGGGACTCTCTCTCTCTCTTCACCTTCATTTCTTCACTTGTTGGTTGGTTCATCTATGGCAGGAGCAGAAGGGTTCGTTGAAGCAGATAATGCAGAGGCCATAATTACCAGAATTGAACACAAATCCCGCAAGATCGAAACTTTACTCAAACAGTATAAGCCCGTGGAAGCCCTTAAAACTGCCCTTGAAGGCACATATGCGATCATTGGGGATGAGCGTTGCAAGTCGGCTCACTGGCTTGTGGTGCACAGAGCTATAATGGCTATAAAAGATGTGGATGGGATGCTTTCTTCCTTGGATCCTGAGTACTATGATATCCTAATGAAGTACTTGTATAGAGGATTAGCTACAGGAGATCGTCCCACGTGTGACCAATGTCTTCGGATTCATGAAAAGTTGACAGAGAAAGCAGGACTAGGTTGCATCCTACGTTTCCTCACTGATACTGTAAATACAGTTTGA
Predicted protein sequences of Glyma.07g112500
>Glyma.07g112500.2.p sequence-type=predicted peptide transcript=Glyma.07g112500.2 locus=Glyma.07g112500 id=Glyma.07g112500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAGAEGFVEADNAEAIITRIEHKSRKIETLLKQYKPVEALKTALEGTYAIIGDERCKSAHWLVVHRAIMAIKDVDGMLSSLDPEYYDILMKGRALMQR*

>Glyma.07g112500.3.p sequence-type=predicted peptide transcript=Glyma.07g112500.3 locus=Glyma.07g112500 id=Glyma.07g112500.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MIKIFPRVPTSLNKSTLLGPTLTFTKYLHREGTLSLSSPSFLHLLVGSSMAGAEGFVEADNAEAIITRIEHKSRKIETLLKQYKPVEALKTALEGTYAIIGDERCKSAHWLVVHRAIMAIKDVDGMLSSLDPEYYDILMKYLYRGLATGDRPTCDQCLRIHEKLTEKAGLGCILRFLTDTVNTV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo