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Report for Sequence Feature Glyma.07g102700

Feature Type:gene_model
Chromosome:Gm07
Start:9828440
stop:9834717
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.07g102700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G18000.1AT S-adenosyl-L-methionine-dependent methyltransferases superfamily protein JGI N/AIEA
GO:0006464GO-bp cellular protein modification process JGI N/AIEA
GO:0006656GO-bp phosphatidylcholine biosynthetic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0008610GO-bp lipid biosynthetic process JGI N/AIEA
GO:0009312GO-bp oligosaccharide biosynthetic process JGI N/AIEA
GO:0009877GO-bp nodulation JGI N/AIEA
GO:0032259GO-bp methylation EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0000234GO-mf phosphoethanolamine N-methyltransferase activity EnsemblGenomesN/AIEA
GO:0004719GO-mf protein-L-isoaspartate (D-aspartate) O-methyltransferase activity JGI N/AIEA
GO:0008168GO-mf methyltransferase activity EnsemblGenomesN/AIEA
GO:0008168GO-mf methyltransferase activity JGI N/AIEA
GO:0008757GO-mf S-adenosylmethionine-dependent methyltransferase activity EnsemblGenomesN/AIEA
GO:0008757GO-mf S-adenosylmethionine-dependent methyltransferase activity JGI N/AIEA
KOG1269 KOG SAM-dependent methyltransferases JGI N/AIEA
PTHR10108Panther METHYLTRANSFERASE JGI N/AIEA
PTHR10108:SF328Panther JGI N/AIEA
PF08241PFAM Methyltransferase domain JGI N/AIEA
PHOSLIPSYN2-PWYSoyCyc9 superpathway of phospholipid biosynthesis II (plants) Plant Metabolic Network ISS
PWY-3385SoyCyc9 choline biosynthesis I Plant Metabolic Network ISS
PWY-4762SoyCyc9 superpathway of choline biosynthesis Plant Metabolic Network ISS
PWY4FS-2SoyCyc9 phosphatidylcholine biosynthesis II Plant Metabolic Network ISS
PWY4FS-3SoyCyc9 phosphatidylcholine biosynthesis III Plant Metabolic Network ISS
PWY4FS-4SoyCyc9 phosphatidylcholine biosynthesis IV Plant Metabolic Network ISS
PWY4FS-5SoyCyc9 superpathway of phosphatidylcholine biosynthesis Plant Metabolic Network ISS
GN7V-58113SoyCyc9-rxn phosphoethanolamine N-methyltransferase Plant Metabolic Network ISS

Expression Patterns of Glyma.07g102700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.07g102700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma07g11580 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.07g102700
>Glyma.07g102700.1 sequence-type=CDS polypeptide=Glyma.07g102700.1.p locus=Glyma.07g102700 ID=Glyma.07g102700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGGTAAGAACGAACGAAGTTGCAAAGCAAAGAATAGAAGACGAAGGGTATAGAGCTCATAACAATCCATTTGGTCTTAATTTGTTTCTGTTTTCTTCATTCTGTCAGCCATATATGGCTTCCTTGGCGACGGTGCAAGATGAACGTTGCGTTCAGAGAAGCTACTGGATTGAACATACCACAGATTTGTCCGTAGAGTCAATGATGCTCGATTCCAACGCCTCTGATCTCGACAAGGAAGAAAGACCCGAAGTTTTGTCCCTACTACCAGCATATGAAGGAAAATCAGTTGTAGAACTTGGAGCAGGTATTGGAAGATTCACAGGTGAATTGGCCAAGAAAGCTGGCCAGTTGCTTGCTGTGGATTTCATTGAGAGTGCTATAAAGAAGAATGAAAGCATTAATGGACACCACAAGAATGTCAAGTTCATGTGTGCTGATGTCACTTCTCCAAACTTGCATATTTCTGAAGGATCAGTTGATCTGATGTTCTCCAATTGGTTACTCATGTATCTTTCAGATAAAGAGGTTGAGAATTTAGCTGCAAGGATGATCAAATGGTTAAAAGTTGGTGGATATGTATTCTTCAGAGAATCATGTTTCCACCAATCTGGAGATTCCAAGAGAAAATACAACCCGACTCACTATAGGGAGCCTAGATTTTACACTAAGGTATTTAAAGAGTGCCATACGAGTGATGATACCCGGAATTCCTTTGAACTTTCCCTTGTTGGATGTAAATGTATTGGAGCTTATGTCCGAAATAAGAAGAATCAAAATCAGATTTGCTGGATATGGAAAAAAGTTAGATCACAGGATGATAGGGGGTTCCAGAGGTTCTTAGATAGTGTTGAGTATAATCATAAGGATATTTTACTTTATGAGAGTGTTTTTGGTCAAGGTTTTGTGAGCACAGGAGGACTTGAAACAACCAAGGAATTCGTGGCAAAGTTGGGACTAAAACCTGGCCAGAAAGTACTGGATGTTGGTTGTGGTACTGGGGGAGGTGACATTTACATGGCAGAAAATTTTGATGTTGAGGTTGTTGGCATTGACCTCTCCATAAACATAATTTCTCTTGCCATTGAACGTGCTATTGGACTCAAATGCTGTGTAGAATTTGAGTGTGCCGATTGCACTAAAAAAACATTTCCTGTGAATACATTTGATGTAATCTATTCCCGTGACACATTGTTACACATCAAAGATAAGCCATCACTATTCAGATCATTTTACAAATGGTTGAAGCGTGGAGGTACACTTCTGATTACTGATTACTGCAAAAGTGAAGGAAGTCTATCATTAGGATATGCTGAGTATATAAAGAAAGGGGGATATTATATTCATGACATGAAAACATATTGTCGGATGCTCGAGAATGCTGGATTTGATGATGTTGTTGCCGAGGATCGAACTAATTTGTTCATGAAAACACTACAACAGGAGTTAAATGCCCTTCACAGCAAGAAGGATGATTTCATTGATGACTTCTCGGAGGAAGACTACAATGAAATTACTGAAAGATGGAAGGCCAAGCAGATGCGGGGGGCAGATGGTGAACAAATATGGAGCTTGTTCATTGCCAAGAAATAA
Predicted protein sequences of Glyma.07g102700
>Glyma.07g102700.1.p sequence-type=predicted peptide transcript=Glyma.07g102700.1 locus=Glyma.07g102700 ID=Glyma.07g102700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEVRTNEVAKQRIEDEGYRAHNNPFGLNLFLFSSFCQPYMASLATVQDERCVQRSYWIEHTTDLSVESMMLDSNASDLDKEERPEVLSLLPAYEGKSVVELGAGIGRFTGELAKKAGQLLAVDFIESAIKKNESINGHHKNVKFMCADVTSPNLHISEGSVDLMFSNWLLMYLSDKEVENLAARMIKWLKVGGYVFFRESCFHQSGDSKRKYNPTHYREPRFYTKVFKECHTSDDTRNSFELSLVGCKCIGAYVRNKKNQNQICWIWKKVRSQDDRGFQRFLDSVEYNHKDILLYESVFGQGFVSTGGLETTKEFVAKLGLKPGQKVLDVGCGTGGGDIYMAENFDVEVVGIDLSINIISLAIERAIGLKCCVEFECADCTKKTFPVNTFDVIYSRDTLLHIKDKPSLFRSFYKWLKRGGTLLITDYCKSEGSLSLGYAEYIKKGGYYIHDMKTYCRMLENAGFDDVVAEDRTNLFMKTLQQELNALHSKKDDFIDDFSEEDYNEITERWKAKQMRGADGEQIWSLFIAKK*






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