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Report for Sequence Feature Glyma.07g091400

Feature Type:gene_model
Chromosome:Gm07
Start:8539101
stop:8547001
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.07g091400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G25440.1AT B-box type zinc finger protein with CCT domain JGI N/AIEA
GO:0005622GO-cc intracellular EnsemblGenomesN/AIEA
GO:0005622GO-cc intracellular JGI N/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
GO:0005515GO-mf protein binding EnsemblGenomesN/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
GO:0008270GO-mf zinc ion binding EnsemblGenomesN/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
KOG1601 KOG GATA-4/5/6 transcription factors JGI N/AIEA
PF00643PFAM B-box zinc finger JGI N/AIEA
PF06203PFAM CCT motif JGI N/AIEA

Proteins Associated with Glyma.07g091400
LocusGene SymbolProtein Name
COL21 CONSTANS-like zinc finger protein

Expression Patterns of Glyma.07g091400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.07g091400 not represented in the dataset
Glyma.07g091400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.07g091400
ParalogEvidenceComments
Glyma.09g184600 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.07g091400 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma07g10161 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.07g091400
>Glyma.07g091400.2 sequence-type=transcript locus=Glyma.07g091400 ID=Glyma.07g091400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATTTGCAGTAGTCTTAAAGCTATGTAATAGTTTCTCGTTACACTGGGGGGGCAAGGAACCAAGTAAGAACAAACTATAAGACCCCACTGTGCTTCACTCTCATCACATTTTCAAGTTTCAGCATAACCAATAATTGAATTTGAATCATTTGGGTCTCTAGACACAAACACTACCCCCTCTTTCCCCCTCCTCAACATTGTTATGATCCCTTGTTGGTAACCATTCCATTTGCACTTGTCTTTGCAACCAAAAAACAAGCTCTATGACCAACGAAATGAAAGAAGCAAGTGCCTTAGGAGCTAGAACAGCACGAGCATGCGAGAGCTGCCTAAAAGTAAGAGCACGGTGGTATTGTGCAGCTGATGATGCATTCCTTTGCCATGGCTGTGACAACATGGTTCACTCAGCAAACCAATTAGCAAGTAGACACGAAAGGGTTAAGCTTCAAACTGCATCCTCTAAGGTCAACTACTCAGTGACCCCTAAGGTAGCATGGCACAGTGGATTCACACGCAAGGCAAGAACGCCACGCCacaacaacaacagacactcatcattgaaacaacaacaacaaaaaaaacCATTACATGAAGAACGAGGAGAGGAAGAAGTGTTTTTCAATAACACTATTAGTCTTCTTCCCCTTGTGCCTGAGCTTGGAAGTGAAGAGCCATTGCTTAATGATGAGACTGAGGAGCAACTACTGTGTCGCGTGCCGGTGTTTGATGCTGAGCTGTGTAGCATATACAATGAAGTGAAGGACGAGGTTGTAGCTGCTGGTGAAGAAGCCTTGGACTTGGAAAACTTTTCTTCCGAGTTTCTTCCATCAGATACGGACCTTGCTGAGTTTACTGCTGATGTGAAAAGCTTTCTTGGAAACGGGGCTGATGAGGATTCACCTGATGATGATGAGCACGTGAAAGAATCAGAACTACTGATTCTTGATTGCAAAGAAGAAGAAGGAGATGAGGAAATGGATGAATGTATTGATGGAGTACTAATTGGAGCCAAAGATGCAATGGTGAAGGTCAAAGATGAAGAAGAACTTGATGCTGATGATGACACAGCTTGCCATTTGGATTCGATTCTTGATATGAACGGCGAGGCATTTAATTGGAATATTGTTGAATCAGAATCACCTGCACAGGCACAAGAAGATGAAGTGAGTAAAGTGGGAACTAAGAAGGACATATTTTTGAGATTAAACTATGAAGAAGTCATTACTGCTTGGGCAAGTCAAGGTTCTCCATGGACTAATGGGACCCCACCTAAGTTCTTCAACTCTGATGATTGCTGGCTAGACTTCTTGGGTTCGAATGGTGGGAATGTTCAATGCTGTTATGGGGCAGTGGGAAGCTTAAGGGTGCATGCAGATGGGGGAAGGGAAGCAAGAGTGTCAAGGTACCGAGAGAAGAGAAGAACGCGTTTATTTGCAAAGAAGATAAGGTATGAAGTGAGGAAGTTGAACGCGGAGAAAAGACCTAGAATGAAAGGTCGATTTGTGAAGAGGACACCCTTTGTTGGAGCCACTGCGTTGCCAGCTTAATCATCAATCACCACTGACATGATTGATCATCAAAGTGATCAAATAAATGGTTAACTTTTCCAAGTTTGATTTTATGGAAAAGTTAGTTTGATTAATTATTAGTTACTAGGTTTTGCCATGTATGTACATTATCATCACTAGGTCAGGTTTCTCTTGCTTGGGATATTTATTGCTTTCTCTAGCAGGTCTAGCTAGTACTAATGGAAATGGTAGCCCCTCTCAGCATGTTGAAGACTTTGGTACTTATATGTACAAGTTTTACATCTGCTATGCATAGGAATTGAAGAAGAAGAACGAAAGCAAACAGGAAATGACAGAACTTCACATACAAGTTTGGTTCTCTTACCATGATGTTCATGATCAAGCAAAGGTGGGAAGGCTATGGCTAAGGGGGTTAATGGACTAGATGTTTTTTAGAGAGTGATAGCAAAGAAACTAAACAAATAAATAAAAAAATACAACCAGTTATTGGATATGTTCAATATGATCCGTGTCTAGTTGCATCAATAAAAAAATACATTAATTTGTGTGGGGACAATGTAACTAGTT

>Glyma.07g091400.3 sequence-type=transcript locus=Glyma.07g091400 ID=Glyma.07g091400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATTTGCAGTAGTCTTAAAGCTATGTAATAGTTTCTCGTTACACTGGGGGGGCAAGGAACCAAGTAAGAACAAACTATAAGACCCCACTGTGCTTCACTCTCATCACATTTTCAAGTTTCAGCATAACCAATAATTGAATTTGAATCATTTGGGTCTCTAGACACAAACACTACCCCCTCTTTCCCCCTCCTCAACATTGTTATGATCCCTTGTTGGTAACCATTCCATTTGCACTTGTCTTTGCAACCAAAAAACAAGCTCTATGACCAACGAAATGAAAGAAGCAAGTGCCTTAGGAGCTAGAACAGCACGAGCATGCGAGAGCTGCCTAAAAGTAAGAGCACGGTGGTATTGTGCAGCTGATGATGCATTCCTTTGCCATGGCTGTGACAACATGGTTCACTCAGCAAACCAATTAGCAAGTAGACACGAAAGGGTTAAGCTTCAAACTGCATCCTCTAAGGTCAACTACTCAGTGACCCCTAAGGTAGCATGGCACAGTGGATTCACACGCAAGGCAAGAACGCCACGCCacaacaacaacagacactcatcattgaaacaacaacaacaaaaaaaacCATTACATGAAGAACGAGGAGAGGAAGAAGTGTTTTTCAATAACACTATTAGTCTTCTTCCCCTTGTGCCTGAGCTTGGAAGTGAAGAGCCATTGCTTAATGATGAGACTGAGGAGCAACTACTGTGTCGCGTGCCGGTGTTTGATGCTGAGCTGTGTAGCATATACAATGAAGTGAAGGACGAGGTTGTAGCTGCTGGTGAAGAAGCCTTGGACTTGGAAAACTTTTCTTCCGAGTTTCTTCCATCAGATACGGACCTTGCTGAGTTTACTGCTGATGTGAAAAGCTTTCTTGGAAACGGGGCTGATGAGGATTCACCTGATGATGATGAGCACGTGAAAGAATCAGAACTACTGATTCTTGATTGCAAAGAAGAAGAAGGAGATGAGGAAATGGATGAATGTATTGATGGAGTACTAATTGGAGCCAAAGATGCAATGGTGAAGGTCAAAGATGAAGAAGAACTTGATGCTGATGATGACACAGCTTGCCATTTGGATTCGATTCTTGATATGAACGGCGAGGCATTTAATTGGAATATTGTTGAATCAGAATCACCTGCACAGGCACAAGAAGATGAAGTGAGTAAAGTGGGAACTAAGAAGGACATATTTTTGAGATTAAACTATGAAGAAGTCATTACTGCTTGGGCAAGTCAAGGTTCTCCATGGACTAATGGGACCCCACCTAAGTTCTTCAACTCTGATGATTGCTGGCTAGACTTCTTGGGTTCGAATGGTGGGAATGTTCAATGCTGTTATGGGGCAGTGGGAAGCTTAAGGGTGCATGCAGATGGGGGAAGGGAAGCAAGAGTGTCAAGGTACCGAGAGAAGAGAAGAACGCGTTTATTTGCAAAGAAGATAAGGTATGAAGTGAGGAAGTTGAACGCGGAGAAAAGACCTAGAATGAAAGGTCGATTTGTGAAGAGGACACCCTTTGTTGGAGCCACTGCGTTGCCAGCTTAATCATCAATCACCACTGACATGATTGATCATCAAAGTGATCAAATAAATGGTTAACTTTTCCAAGTTTGATTTTATGGAAAAGTTAGTTTGATTAATTATTAGTTACTAGGTTTTGCCATGTATGTACATTATCATCACTAGGTCAGGTTTCTCTTGCTTGGGATATTTATTGCTTTCTCTAGCAGGTCTAGCTAGTACTAATGGAAATGGTAGCCCCTCTCAGCATGTTGAAGACTTTGGTAATCAATTTCGGGAGCCCTTTTTCAATGTTGCTTAATTATGATATATATAAGAATCTGTAATTAATCTATGCTGATGTTATGTTTACCTTTAACTCTGAGGGTACTGATTAACAGTGTTTAA
Coding sequences of Glyma.07g091400
>Glyma.07g091400.1 sequence-type=CDS polypeptide=Glyma.07g091400.1.p locus=Glyma.07g091400 ID=Glyma.07g091400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACCAACGAAATGAAAGAAGCAAGTGCCTTAGGAGCTAGAACAGCACGAGCATGCGAGAGCTGCCTAAAAGTAAGAGCACGGTGGTATTGTGCAGCTGATGATGCATTCCTTTGCCATGGCTGTGACAACATGGTTCACTCAGCAAACCAATTAGCAAGTAGACACGAAAGGGTTAAGCTTCAAACTGCATCCTCTAAGGTCAACTACTCAGTGACCCCTAAGGTAGCATGGCACAGTGGATTCACACGCAAGGCAAGAACGCCACGCCACAACAACAACAGACACTCATCATTGAAACAACAACAACAAAAAAAACCATTACATGAAGAACGAGGAGAGGAAGAAGTGTTTTTCAATAACACTATTAGTCTTCTTCCCCTTGTGCCTGAGCTTGGAAGTGAAGAGCCATTGCTTAATGATGAGACTGAGGAGCAACTACTGTGTCGCGTGCCGGTGTTTGATGCTGAGCTGTGTAGCATATACAATGAAGTGAAGGACGAGGTTGTAGCTGCTGGTGAAGAAGCCTTGGACTTGGAAAACTTTTCTTCCGAGTTTCTTCCATCAGATACGGACCTTGCTGAGTTTACTGCTGATGTGAAAAGCTTTCTTGGAAACGGGGCTGATGAGGATTCACCTGATGATGATGAGCACGTGAAAGAATCAGAACTACTGATTCTTGATTGCAAAGAAGAAGAAGGAGATGAGGAAATGGATGAATGTATTGATGGAGTACTAATTGGAGCCAAAGATGCAATGGTGAAGGTCAAAGATGAAGAAGAACTTGATGCTGATGATGACACAGCTTGCCATTTGGATTCGATTCTTGATATGAACGGCGAGGCATTTAATTGGAATATTGTTGAATCAGAATCACCTGCACAGGCACAAGAAGATGAAGTGAGTAAAGTGGGAACTAAGAAGGACATATTTTTGAGATTAAACTATGAAGAAGTCATTACTGCTTGGGCAAGTCAAGGTTCTCCATGGACTAATGGGACCCCACCTAAGTTCTTCAACTCTGATGATTGCTGGCTAGACTTCTTGGGTTCGAATGGTGGGAATGTTCAATGCTGTTATGGGGCAGTGGGAAGCTTAAGGGTGCATGCAGATGGGGGAAGGGAAGCAAGAGTGTCAAGGTACCGAGAGAAGAGAAGAACGCGTTTATTTGCAAAGAAGATAAGGTATGAAGTGAGGAAGTTGAACGCGGAGAAAAGACCTAGAATGAAAGGTCGATTTGTGAAGAGGACACCCTTTGTTGGAGCCACTGCGTTGCCAGCTTAA

>Glyma.07g091400.2 sequence-type=CDS polypeptide=Glyma.07g091400.2.p locus=Glyma.07g091400 ID=Glyma.07g091400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACCAACGAAATGAAAGAAGCAAGTGCCTTAGGAGCTAGAACAGCACGAGCATGCGAGAGCTGCCTAAAAGTAAGAGCACGGTGGTATTGTGCAGCTGATGATGCATTCCTTTGCCATGGCTGTGACAACATGGTTCACTCAGCAAACCAATTAGCAAGTAGACACGAAAGGGTTAAGCTTCAAACTGCATCCTCTAAGGTCAACTACTCAGTGACCCCTAAGGTAGCATGGCACAGTGGATTCACACGCAAGGCAAGAACGCCACGCCACAACAACAACAGACACTCATCATTGAAACAACAACAACAAAAAAAACCATTACATGAAGAACGAGGAGAGGAAGAAGTGTTTTTCAATAACACTATTAGTCTTCTTCCCCTTGTGCCTGAGCTTGGAAGTGAAGAGCCATTGCTTAATGATGAGACTGAGGAGCAACTACTGTGTCGCGTGCCGGTGTTTGATGCTGAGCTGTGTAGCATATACAATGAAGTGAAGGACGAGGTTGTAGCTGCTGGTGAAGAAGCCTTGGACTTGGAAAACTTTTCTTCCGAGTTTCTTCCATCAGATACGGACCTTGCTGAGTTTACTGCTGATGTGAAAAGCTTTCTTGGAAACGGGGCTGATGAGGATTCACCTGATGATGATGAGCACGTGAAAGAATCAGAACTACTGATTCTTGATTGCAAAGAAGAAGAAGGAGATGAGGAAATGGATGAATGTATTGATGGAGTACTAATTGGAGCCAAAGATGCAATGGTGAAGGTCAAAGATGAAGAAGAACTTGATGCTGATGATGACACAGCTTGCCATTTGGATTCGATTCTTGATATGAACGGCGAGGCATTTAATTGGAATATTGTTGAATCAGAATCACCTGCACAGGCACAAGAAGATGAAGTGAGTAAAGTGGGAACTAAGAAGGACATATTTTTGAGATTAAACTATGAAGAAGTCATTACTGCTTGGGCAAGTCAAGGTTCTCCATGGACTAATGGGACCCCACCTAAGTTCTTCAACTCTGATGATTGCTGGCTAGACTTCTTGGGTTCGAATGGTGGGAATGTTCAATGCTGTTATGGGGCAGTGGGAAGCTTAAGGGTGCATGCAGATGGGGGAAGGGAAGCAAGAGTGTCAAGGTACCGAGAGAAGAGAAGAACGCGTTTATTTGCAAAGAAGATAAGGTATGAAGTGAGGAAGTTGAACGCGGAGAAAAGACCTAGAATGAAAGGTCGATTTGTGAAGAGGACACCCTTTGTTGGAGCCACTGCGTTGCCAGCTTAA

>Glyma.07g091400.3 sequence-type=CDS polypeptide=Glyma.07g091400.3.p locus=Glyma.07g091400 ID=Glyma.07g091400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACCAACGAAATGAAAGAAGCAAGTGCCTTAGGAGCTAGAACAGCACGAGCATGCGAGAGCTGCCTAAAAGTAAGAGCACGGTGGTATTGTGCAGCTGATGATGCATTCCTTTGCCATGGCTGTGACAACATGGTTCACTCAGCAAACCAATTAGCAAGTAGACACGAAAGGGTTAAGCTTCAAACTGCATCCTCTAAGGTCAACTACTCAGTGACCCCTAAGGTAGCATGGCACAGTGGATTCACACGCAAGGCAAGAACGCCACGCCACAACAACAACAGACACTCATCATTGAAACAACAACAACAAAAAAAACCATTACATGAAGAACGAGGAGAGGAAGAAGTGTTTTTCAATAACACTATTAGTCTTCTTCCCCTTGTGCCTGAGCTTGGAAGTGAAGAGCCATTGCTTAATGATGAGACTGAGGAGCAACTACTGTGTCGCGTGCCGGTGTTTGATGCTGAGCTGTGTAGCATATACAATGAAGTGAAGGACGAGGTTGTAGCTGCTGGTGAAGAAGCCTTGGACTTGGAAAACTTTTCTTCCGAGTTTCTTCCATCAGATACGGACCTTGCTGAGTTTACTGCTGATGTGAAAAGCTTTCTTGGAAACGGGGCTGATGAGGATTCACCTGATGATGATGAGCACGTGAAAGAATCAGAACTACTGATTCTTGATTGCAAAGAAGAAGAAGGAGATGAGGAAATGGATGAATGTATTGATGGAGTACTAATTGGAGCCAAAGATGCAATGGTGAAGGTCAAAGATGAAGAAGAACTTGATGCTGATGATGACACAGCTTGCCATTTGGATTCGATTCTTGATATGAACGGCGAGGCATTTAATTGGAATATTGTTGAATCAGAATCACCTGCACAGGCACAAGAAGATGAAGTGAGTAAAGTGGGAACTAAGAAGGACATATTTTTGAGATTAAACTATGAAGAAGTCATTACTGCTTGGGCAAGTCAAGGTTCTCCATGGACTAATGGGACCCCACCTAAGTTCTTCAACTCTGATGATTGCTGGCTAGACTTCTTGGGTTCGAATGGTGGGAATGTTCAATGCTGTTATGGGGCAGTGGGAAGCTTAAGGGTGCATGCAGATGGGGGAAGGGAAGCAAGAGTGTCAAGGTACCGAGAGAAGAGAAGAACGCGTTTATTTGCAAAGAAGATAAGGTATGAAGTGAGGAAGTTGAACGCGGAGAAAAGACCTAGAATGAAAGGTCGATTTGTGAAGAGGACACCCTTTGTTGGAGCCACTGCGTTGCCAGCTTAA
Predicted protein sequences of Glyma.07g091400
>Glyma.07g091400.1.p sequence-type=predicted peptide transcript=Glyma.07g091400.1 locus=Glyma.07g091400 ID=Glyma.07g091400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTNEMKEASALGARTARACESCLKVRARWYCAADDAFLCHGCDNMVHSANQLASRHERVKLQTASSKVNYSVTPKVAWHSGFTRKARTPRHNNNRHSSLKQQQQKKPLHEERGEEEVFFNNTISLLPLVPELGSEEPLLNDETEEQLLCRVPVFDAELCSIYNEVKDEVVAAGEEALDLENFSSEFLPSDTDLAEFTADVKSFLGNGADEDSPDDDEHVKESELLILDCKEEEGDEEMDECIDGVLIGAKDAMVKVKDEEELDADDDTACHLDSILDMNGEAFNWNIVESESPAQAQEDEVSKVGTKKDIFLRLNYEEVITAWASQGSPWTNGTPPKFFNSDDCWLDFLGSNGGNVQCCYGAVGSLRVHADGGREARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRTPFVGATALPA*

>Glyma.07g091400.2.p sequence-type=predicted peptide transcript=Glyma.07g091400.2 locus=Glyma.07g091400 ID=Glyma.07g091400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTNEMKEASALGARTARACESCLKVRARWYCAADDAFLCHGCDNMVHSANQLASRHERVKLQTASSKVNYSVTPKVAWHSGFTRKARTPRHNNNRHSSLKQQQQKKPLHEERGEEEVFFNNTISLLPLVPELGSEEPLLNDETEEQLLCRVPVFDAELCSIYNEVKDEVVAAGEEALDLENFSSEFLPSDTDLAEFTADVKSFLGNGADEDSPDDDEHVKESELLILDCKEEEGDEEMDECIDGVLIGAKDAMVKVKDEEELDADDDTACHLDSILDMNGEAFNWNIVESESPAQAQEDEVSKVGTKKDIFLRLNYEEVITAWASQGSPWTNGTPPKFFNSDDCWLDFLGSNGGNVQCCYGAVGSLRVHADGGREARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRTPFVGATALPA*

>Glyma.07g091400.3.p sequence-type=predicted peptide transcript=Glyma.07g091400.3 locus=Glyma.07g091400 ID=Glyma.07g091400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTNEMKEASALGARTARACESCLKVRARWYCAADDAFLCHGCDNMVHSANQLASRHERVKLQTASSKVNYSVTPKVAWHSGFTRKARTPRHNNNRHSSLKQQQQKKPLHEERGEEEVFFNNTISLLPLVPELGSEEPLLNDETEEQLLCRVPVFDAELCSIYNEVKDEVVAAGEEALDLENFSSEFLPSDTDLAEFTADVKSFLGNGADEDSPDDDEHVKESELLILDCKEEEGDEEMDECIDGVLIGAKDAMVKVKDEEELDADDDTACHLDSILDMNGEAFNWNIVESESPAQAQEDEVSKVGTKKDIFLRLNYEEVITAWASQGSPWTNGTPPKFFNSDDCWLDFLGSNGGNVQCCYGAVGSLRVHADGGREARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRTPFVGATALPA*






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