SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.07g042800

Feature Type:gene_model
Chromosome:Gm07
Start:3554172
stop:3556013
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.07g042800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G14180.1AT JGI N/AIEA
KOG4282 KOG Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain JGI N/AIEA
PTHR31307PantherFam TRIHELIX TRANSCRIPTION FACTOR ASIL2 JGI N/AIEA
PTHR31307:SF4PantherFam TRIHELIX TRANSCRIPTION FACTOR ASIL2 JGI N/AIEA
PF13837Pfam Myb/SANT-like DNA-binding domain JGI N/AIEA

Gene model name correspondences to Glyma.07g042800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma07g04790 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.07g042800
>Glyma.07g042800.1 sequence-type=CDS polypeptide=Glyma.07g042800.1.p locus=Glyma.07g042800 id=Glyma.07g042800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACGACGACGACGAGATCCAGTCGCATCCTTCGCCGGCGAGCGGATCCCCTCCGTCGTCGCCGAGGGCGAACGGTCGGATAACGGTGACGGTCGCGGCTCCGGCGCCGCCACCACCGCCGAACAGTCTGGCATTAGCGCTTCCGATTCAGCAGCCGGCGAAGGGAAACGGCGGAGGAGGAGGCGGCGGCGGCGGAAGGGAGGATTGCTGGAGCGAAGGTGCGACGGCGGTGCTGATCGACGCGTGGGGAGAGAGGTATCTGGAACTGAGCAGAGGAAATCTGAAGCAGAAGCACTGGAAGGAGGTGGCGGATATCGTGAGCGTCAGAGAGGATTACACGAAGGCGCCGAAGACCGATATCCAGTGCAAAAACCGGATCGACACCGTTAAGAAGAAGTACAAATCGGAGAAGGCGAAGATCGCCGCCGGCGCCACCAGCAAGTGGCCGTTCTATGACCGACTGGAACAATTAATCGGTCCAAGCGCCAAGATCCCCGGCGTCGGCGGTGCCTCCGGCACCAGCGCTGCCGGAAACAGTAATTTACAACCGCAGAAAGTTCCGTTAGGAATTCCGGTCGGCGTTCGCGGCGGCGCGAATCAGTTTAACCATCCTCATAAACAGCCACAACCGGTTCCGTTGAAGAACCAGAAGATTCAGTTCCGGCGCCGCGGTCCTCCGGTGGAGTCCGATTCGGAGGAGCGAGACGCGTCGTCGCCGGCGTCGAGCGACAGTTTTCCGCCGGAGAGTTTCGAGAGGAAGAGGCCGCGGTTGATGAGTTCAAACACCACGAAAGGAAGCGGAGAAAGACGGAAGGCGAAGGGTTGGGGAAGCGCGGTGAGGGAACTGACGCAGGCGATTCTGAAATTCGGCGAGGCGTATGAACAAGCGGAGAGTTCGAAGCTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAATTCGCAAAGGATTTGGAGTTGCAGAGAATGCAGTTTTTCATGAAGACCCAGGTAGAGATTTCGCAGCTCAAACTTGGAAGAAAAGGTGGTAACCCTAGCAACAACCACCATGGCACCACCAACAATAACAACAGCAATCATAACAATAATAGTGGCAGTGAATGA

>Glyma.07g042800.2 sequence-type=CDS polypeptide=Glyma.07g042800.2.p locus=Glyma.07g042800 id=Glyma.07g042800.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACGACGACGACGAGATCCAGTCGCATCCTTCGCCGGCGAGCGGATCCCCTCCGTCGTCGCCGAGGGCGAACGGTCGGATAACGGTGACGGTCGCGGCTCCGGCGCCGCCACCACCGCCGAACAGTCTGGCATTAGCGCTTCCGATTCAGCAGCCGGCGAAGGGAAACGGCGGAGGAGGAGGCGGCGGCGGCGGAAGGGAGGATTGCTGGAGCGAAGGTGCGACGGCGGTGCTGATCGACGCGTGGGGAGAGAGGTATCTGGAACTGAGCAGAGGAAATCTGAAGCAGAAGCACTGGAAGGAGGTGGCGGATATCGTGAGCGTCAGAGAGGATTACACGAAGGCGCCGAAGACCGATATCCAGTGCAAAAACCGGATCGACACCGTTAAGAAGAAGTACAAATCGGAGAAGGCGAAGATCGCCGCCGGCGCCACCAGCAAGTGGCCGTTCTATGACCGACTGGAACAATTAATCGGTCCAAGCGCCAAGATCCCCGGCGTCGGCGGTGCCTCCGGCACCAGCGCTGCCGGAAACAGTAATTTACAACCGCAGAAAGTTCCGTTAGGAATTCCGGTCGGCGTTCGCGGCGGCGCGAATCAGTTTAACCATCCTCATAAACAGCCACAACCGGTTCCGTTGAAGAACCAGAAGATTCAGTTCCGGCGCCGCGGTCCTCCGGTGGAGTCCGATTCGGAGGAGCGAGACGCGTCGTCGCCGGCGTCGAGCGACAGTTTTCCGCCGGAGAGTTTCGAGAGGAAGAGGCCGCGGTTGATGAGTTCAAACACCACGAAAGGAAGCGGAGAAAGACGGAAGGCGAAGGGTTGGGGAAGCGCGGTGAGGGAACTGACGCAGGCGATTCTGAAATTCGGCGAGGCGTATGAACAAGCGGAGAGTTCGAAGCTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAATTCGCAAAGGATTTGGAGTTGCAGAGAATGCAGTTTTTCATGAAGACCCAGGTAGAGATTTCGCAGCTCAAACTTGGAAGAAAAGGTGGTAACCCTAGCAACAACCACCATGGCACCACCAACAATAACAACAGCAATCATAACAATAATAGTGGCAGTGAATGA
Predicted protein sequences of Glyma.07g042800
>Glyma.07g042800.1.p sequence-type=predicted peptide transcript=Glyma.07g042800.1 locus=Glyma.07g042800 id=Glyma.07g042800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDDDDEIQSHPSPASGSPPSSPRANGRITVTVAAPAPPPPPNSLALALPIQQPAKGNGGGGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSVREDYTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAGATSKWPFYDRLEQLIGPSAKIPGVGGASGTSAAGNSNLQPQKVPLGIPVGVRGGANQFNHPHKQPQPVPLKNQKIQFRRRGPPVESDSEERDASSPASSDSFPPESFERKRPRLMSSNTTKGSGERRKAKGWGSAVRELTQAILKFGEAYEQAESSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQVEISQLKLGRKGGNPSNNHHGTTNNNNSNHNNNSGSE*

>Glyma.07g042800.2.p sequence-type=predicted peptide transcript=Glyma.07g042800.2 locus=Glyma.07g042800 id=Glyma.07g042800.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDDDDEIQSHPSPASGSPPSSPRANGRITVTVAAPAPPPPPNSLALALPIQQPAKGNGGGGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSVREDYTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAGATSKWPFYDRLEQLIGPSAKIPGVGGASGTSAAGNSNLQPQKVPLGIPVGVRGGANQFNHPHKQPQPVPLKNQKIQFRRRGPPVESDSEERDASSPASSDSFPPESFERKRPRLMSSNTTKGSGERRKAKGWGSAVRELTQAILKFGEAYEQAESSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQVEISQLKLGRKGGNPSNNHHGTTNNNNSNHNNNSGSE*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo