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Report for Sequence Feature Glyma.07g039600

Feature Type:gene_model
Chromosome:Gm07
Start:3244402
stop:3259598
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G54130.1AT AT-RSH3,ATRSH3,RSH3 JGI N/AIEA
2.7.6.5EC GTP diphosphokinase JGI N/AIEA
3.2.1.37EC xylan 1,4-beta-xylosidase JGI N/AIEA
3.2.1.55EC non-reducing end alpha-L-arabinofuranosidase JGI N/AIEA
GO:0015969GO-bp guanosine tetraphosphate metabolic process JGI N/AIEA
PTHR21262PantherFam GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE JGI N/AIEA
PF01966Pfam HD domain JGI N/AIEA
PF04607Pfam Region found in RelA / SpoT proteins JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma07g04450 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.07g039600.1 sequence-type=CDS polypeptide=Glyma.07g039600.1.p locus=Glyma.07g039600 id=Glyma.07g039600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGGTTTCTACGATAGCCTTGTACGCGAGTCCACCCAGCGGCGTGTGTTCCACGTCGCACCAGATCAACTGCCACGCTGGCTACGACTTCGAATTGGGGTCGCGATCTTCGTCGCCGGCGGGGTCGACGGCGCCGCCGTCGACCTCGCAGAAGCCAGTGATGGGCGGGCTCTCGTGCCTGTTTTCGTCGCCGGCGCCTCCGCGGAAGCATGCGCCGCAGCTCTCGTCGAACTTTTCCGGCGAGGAGGACGAGATGAAGGAGCTGAGCAGTTCCTTCTCGTATTCTCCGAGCAAATTCGCTGGTTCTTCGTGGAAGAGGGATCAGAGTCCCGTGTCGGTGTTTCATGGTCCTGTTTCGTGTAGCAGTAGTGGTAGAAGTTCCACGGGTTCGACCCCTATTAGAAGTTTCAGGGGTGGGACCAGTGGTTTGTTTGATGGGTTTGTGAGGAATGCGTTGGGGTCTTCATGTTTGGACTATGACTTAGATGCGGGTGATTCTTCTGCTATGGTTGATGAGTTGACCTTCAATTTGGAGGACAATTTCGTGGAGGGTGGGTTTCACTTTGAGCCATATGCTAAAAAGTTGCTTCTTGGGGCGCAAATGAGGCACAAGATCTTCTGTGAGGAGTTTGTTATCAAGGCCTTTTGTGAAGCTGAGAAAGCACACAGAGGGCAGATGCGAGCAAGTGGGGATCCTTACTTGCAGCATTGTTTGGAGACTGCTGTGTTGCTGGCTTTGATTGGTGCCAATTCCACTGTTGTGGCGGCGGGGCTCTTGCATGACTCGCTGGATGATGCTTTTCTGACTTATGATTATATAGTTGGGGTGTTTGGCACTGGTGTTGCTGATTTGGTTGAAGGGGTTTCTAAACTGAGTCACTTAAGCAAGCTGGCTCGAGAAAATAATACGGCTAGCAAGTCAGTTGAAGCAGACCGCTTGCATACTATGTTCCTTGGCATGGCAGATGCAAGAGCTGTCCTCGTTAAATTGGCAGATCGGTTGCATAATATGATGACACTAGATGCATTGCCAGGGGCCAAGCAACAGAGGTTTGCAAAGGAGACTTTGGAGATTTTTGCACCTTTGGCCAATCGCTTGGGAATTTCTACTTGGAAGGAACAATTAGAAAATTTGTGTTTTAAGCATCTCAACCCAAGCCAGCATGAGGAGCTTTCATCCAAGCTTGTGGAATCGTACGATGATGCAATGATTACTTCTGCAATAGAGAGATTAGAGCAAGCACTTAAAGATGAAGGCATTTCTTATAATGTCATTTCTGGGCGACATAAGAGCTTGTATAGCATTTATTGCAAAATGTTAAAGAAGAAACTTACCATAGATGATATCCATGACATTTATGGGCTGCGCTTGATTGTTGACAAGGAAGAAGACTGTTACAAGGCCTTGACAGTAGTTCATCGATTGTGGTCTGAGGTGCCTGGAAAGCTGAAAGATTACATATGTCGTCCCAAGTTCAATGGATATCAATCTCTGCATACTGTGGTGATGGGTGAAGGCAAGGTTCCCCTTGAAGTACAAATTCGGACCAAAGATATGCATTTGCAAGCAGATTTTGGATTTGCTGCTCATTGGAGATACAAGGAAGATGATTGTCAGCATTCTTCGTTTGTGCTTCAGATGGTTGAGTGGGCTCGATGGGTTGTCACCTGGCAGTGTGAAGCAATGAGTAGAGATTGTTCATCTGTTGGATATGCTGATTCAGTCAAGCCCCCATGCAAGTTCCCTTCACATGCTGAGGATTGCCCATATTCTTACAAGCCTGATTGTGGTCAGAATGGCCCTGTGTTTGTTATCATGATTGAGAATGATAAGATGTCTGTCCAAGAATTCAGTGCAAACTCAACAGTATTGGATTTGTTGAAAAGATCTGGGAGAGCAAGCTCTAGGTTGACAACATATAGGTTCCCATTGAAGGAAGAGTTGAGGCCAAGGCTGAATCATAAACCCGTTAGTGATCCCAATAGCAAGTTGAAGATGGGAGATGTGATTGAACTTACACCAGCCATACCTGACAAGTCTCTTACAGAATATAGGGAAGAAATCCAGCGTATGTATGATCGCGGGCTAACTGTGTCAAGCATGGGAACCGCCGCAAGCACCATGGCTGGCTCAAGAAGTTGA

>Glyma.07g039600.2 sequence-type=CDS polypeptide=Glyma.07g039600.2.p locus=Glyma.07g039600 id=Glyma.07g039600.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAGGAAGAAGGGTTGGTTTGGTTCTACGTAGCCTTTACGTCTCGCTTGGTTGGGAAGCAAGAGATAATGAAAAAGGCATGCATGGGTCTTGTGCACGGTGCACGCATCATTCGGATGCGAGCAAGTGGGGATCCTTACTTGCAGCATTGTTTGGAGACTGCTGTGTTGCTGGCTTTGATTGGTGCCAATTCCACTGTTGTGGCGGCGGGGCTCTTGCATGACTCGCTGGATGATGCTTTTCTGACTTATGATTATATAGTTGGGGTGTTTGGCACTGGTGTTGCTGATTTGGTTGAAGGGGTTTCTAAACTGAGTCACTTAAGCAAGCTGGCTCGAGAAAATAATACGGCTAGCAAGTCAGTTGAAGCAGACCGCTTGCATACTATGTTCCTTGGCATGGCAGATGCAAGAGCTGTCCTCGTTAAATTGGCAGATCGGTTGCATAATATGATGACACTAGATGCATTGCCAGGGGCCAAGCAACAGAGGTTTGCAAAGGAGACTTTGGAGATTTTTGCACCTTTGGCCAATCGCTTGGGAATTTCTACTTGGAAGGAACAATTAGAAAATTTGTGTTTTAAGCATCTCAACCCAAGCCAGCATGAGGAGCTTTCATCCAAGCTTGTGGAATCGTACGATGATGCAATGATTACTTCTGCAATAGAGAGATTAGAGCAAGCACTTAAAGATGAAGGCATTTCTTATAATGTCATTTCTGGGCGACATAAGAGCTTGTATAGCATTTATTGCAAAATGTTAAAGAAGAAACTTACCATAGATGATATCCATGACATTTATGGGCTGCGCTTGATTGTTGACAAGGAAGAAGACTGTTACAAGGCCTTGACAGTAGTTCATCGATTGTGGTCTGAGGTGCCTGGAAAGCTGAAAGATTACATATGTCGTCCCAAGTTCAATGGATATCAATCTCTGCATACTGTGGTGATGGGTGAAGGCAAGGTTCCCCTTGAAGTACAAATTCGGACCAAAGATATGCATTTGCAAGCAGATTTTGGATTTGCTGCTCATTGGAGATACAAGGAAGATGATTGTCAGCATTCTTCGTTTGTGCTTCAGATGGTTGAGTGGGCTCGATGGGTTGTCACCTGGCAGTGTGAAGCAATGAGTAGAGATTGTTCATCTGTTGGATATGCTGATTCAGTCAAGCCCCCATGCAAGTTCCCTTCACATGCTGAGGATTGCCCATATTCTTACAAGCCTGATTGTGGTCAGAATGGCCCTGTGTTTGTTATCATGATTGAGAATGATAAGATGTCTGTCCAAGAATTCAGTGCAAACTCAACAGTATTGGATTTGTTGAAAAGATCTGGGAGAGCAAGCTCTAGGTTGACAACATATAGGTTCCCATTGAAGGAAGAGTTGAGGCCAAGGCTGAATCATAAACCCGTTAGTGATCCCAATAGCAAGTTGAAGATGGGAGATGTGATTGAACTTACACCAGCCATACCTGACAAGTCTCTTACAGAATATAGGGAAGAAATCCAGCGTATGTATGATCGCGGGCTAACTGTGTCAAGCATGGGAACCGCCGCAAGCACCATGGCTGGCTCAAGAAGTTGA

>Glyma.07g039600.1.p sequence-type=predicted peptide transcript=Glyma.07g039600.1 locus=Glyma.07g039600 id=Glyma.07g039600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAVSTIALYASPPSGVCSTSHQINCHAGYDFELGSRSSSPAGSTAPPSTSQKPVMGGLSCLFSSPAPPRKHAPQLSSNFSGEEDEMKELSSSFSYSPSKFAGSSWKRDQSPVSVFHGPVSCSSSGRSSTGSTPIRSFRGGTSGLFDGFVRNALGSSCLDYDLDAGDSSAMVDELTFNLEDNFVEGGFHFEPYAKKLLLGAQMRHKIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDSLDDAFLTYDYIVGVFGTGVADLVEGVSKLSHLSKLARENNTASKSVEADRLHTMFLGMADARAVLVKLADRLHNMMTLDALPGAKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPSQHEELSSKLVESYDDAMITSAIERLEQALKDEGISYNVISGRHKSLYSIYCKMLKKKLTIDDIHDIYGLRLIVDKEEDCYKALTVVHRLWSEVPGKLKDYICRPKFNGYQSLHTVVMGEGKVPLEVQIRTKDMHLQADFGFAAHWRYKEDDCQHSSFVLQMVEWARWVVTWQCEAMSRDCSSVGYADSVKPPCKFPSHAEDCPYSYKPDCGQNGPVFVIMIENDKMSVQEFSANSTVLDLLKRSGRASSRLTTYRFPLKEELRPRLNHKPVSDPNSKLKMGDVIELTPAIPDKSLTEYREEIQRMYDRGLTVSSMGTAASTMAGSRS*

>Glyma.07g039600.2.p sequence-type=predicted peptide transcript=Glyma.07g039600.2 locus=Glyma.07g039600 id=Glyma.07g039600.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKEEGLVWFYVAFTSRLVGKQEIMKKACMGLVHGARIIRMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDSLDDAFLTYDYIVGVFGTGVADLVEGVSKLSHLSKLARENNTASKSVEADRLHTMFLGMADARAVLVKLADRLHNMMTLDALPGAKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPSQHEELSSKLVESYDDAMITSAIERLEQALKDEGISYNVISGRHKSLYSIYCKMLKKKLTIDDIHDIYGLRLIVDKEEDCYKALTVVHRLWSEVPGKLKDYICRPKFNGYQSLHTVVMGEGKVPLEVQIRTKDMHLQADFGFAAHWRYKEDDCQHSSFVLQMVEWARWVVTWQCEAMSRDCSSVGYADSVKPPCKFPSHAEDCPYSYKPDCGQNGPVFVIMIENDKMSVQEFSANSTVLDLLKRSGRASSRLTTYRFPLKEELRPRLNHKPVSDPNSKLKMGDVIELTPAIPDKSLTEYREEIQRMYDRGLTVSSMGTAASTMAGSRS*







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