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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G80460.1 | AT | Actin-like ATPase superfamily protein | JGI | N/A | IEA |
| GO:0005975 | GO-bp | carbohydrate metabolic process | EnsemblGenomes | N/A | IEA |
| GO:0005975 | GO-bp | carbohydrate metabolic process | JGI | N/A | IEA |
| GO:0006071 | GO-bp | glycerol metabolic process | EnsemblGenomes | N/A | IEA |
| GO:0006072 | GO-bp | glycerol-3-phosphate metabolic process | EnsemblGenomes | N/A | IEA |
| GO:0006641 | GO-bp | triglyceride metabolic process | EnsemblGenomes | N/A | IEA |
| GO:0016310 | GO-bp | phosphorylation | EnsemblGenomes | N/A | IEA |
| GO:0046167 | GO-bp | glycerol-3-phosphate biosynthetic process | EnsemblGenomes | N/A | IEA |
| GO:0005739 | GO-cc | mitochondrion | EnsemblGenomes | N/A | IEA |
| GO:0004370 | GO-mf | glycerol kinase activity | EnsemblGenomes | N/A | IEA |
| GO:0016301 | GO-mf | kinase activity | EnsemblGenomes | N/A | IEA |
| GO:0016740 | GO-mf | transferase activity | EnsemblGenomes | N/A | IEA |
| GO:0016773 | GO-mf | phosphotransferase activity, alcohol group as acceptor | EnsemblGenomes | N/A | IEA |
| GO:0016773 | GO-mf | phosphotransferase activity, alcohol group as acceptor | JGI | N/A | IEA |
| KOG2517 | KOG | Ribulose kinase and related carbohydrate kinases | JGI | N/A | IEA |
| PTHR10196 | Panther | SUGAR KINASE | JGI | N/A | IEA |
| PTHR10196:SF9 | Panther | GH12641P | JGI | N/A | IEA |
| PF00370 | PFAM | FGGY family of carbohydrate kinases, N-terminal domain | JGI | N/A | IEA |
| PF02782 | PFAM | FGGY family of carbohydrate kinases, C-terminal domain | JGI | N/A | IEA |
| PWY-4261 | SoyCyc9 | glycerol degradation I | Plant Metabolic Network | ISS | |
| GN7V-63786 | SoyCyc9-rxn | glycerol kinase | Plant Metabolic Network | ISS |
| Locus | Gene Symbol | Protein Name |
|---|---|---|
| GK | glycerol kinase |
|
Glyma.07g028600 not represented in the dataset |
Glyma.07g028600 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma07g03230 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.07g028600.1 sequence-type=CDS polypeptide=Glyma.07g028600.1.p locus=Glyma.07g028600 ID=Glyma.07g028600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGTCGAAAGAGGATGTGTTTGTTGGCGCGATCGACCAAGGAACGAGCAGCAGCAGGTTCATAATATACGACGCGAAGACTGGAGTAGTAGGATGCCACCACGTGGAGTTCACCCAGTTCTACCCGCAAGCCGGGTGGGTGGAGCATGACCCCATGGAGATCTTGGAGAGTGTGAAGGTGTGCGTGGCCAAGGCCGTCGATAAGGCCACCGCTGATGGCTTCAACGTCGATAAAGGCTTGAAGGCCATTGGTCTCACCAATCAGAGAGAGACCACTCTCCTCTGGAGCAAATCCACCGGCCTCCCTCTTCACAACGCCATTGTTTGGATGGATGCTCGCACTTCTTCCATTTGCAGGAGATTGGAAAAGGAGTTATCTGGCGGTAGAAACCATTTTGTGGAGAGTTGTGGCTTGCCTATTAGCACATACTTCAGTGCTTTGAAGCTGCTGTGGTTGATGGAAAATGTAGATGCCGTAAAGGAGGCCATAAAGAAAAAGGATGCGCTGTTTGGAACTATTGACACTTGGTTGATATGGAATCTAACTGGTGGGGTGAATGGGGGATTGCATGTTACCGATGTTTCAAATGCATCTCGTACAATGCTCATGAATCTAAAAACCCTTGACTGGGATGCATCTACCTTAAAAACCCTTAATATTCCTGCTGAAATTTTGCCTAATATTGTTAGTAATGCCGAAATTATAGGAGAGGTTGGGTCTGGATGGCCAATTGCTGGTGTCCCTATTGCTGGATGTTTAGGGGATCAACATGCTGCAATGTTAGGACAATCATGCCGTAAAGGGGAGGCTAAGAGCACTTATGGCACAGGTGCTTTCATACTACTAAATACTGGTGAAGGGATAATTCAATCGAAGCACGGTCTTTTATCCACTATAGCTTTCAAGCTTGGCCCAAAAGCTCCAACCAATTATGCATTGGAAGGATCAGTTGCTATTGCTGGAGCTGCAGTGCAGTGGCTTAGAGACGGTCTTGGCATCATTTCTAGTGCTGCAGAGATAGAGGAGATGGCATTACAGGTTGAATCCACTGGTGGGGTTTACTTTGTTCCTGCTTTTAATGGATTGTTTGCCCCATGGTGGCGTGAGGATGCTCGCGGGGTTTGTATTGGAATAACAAGGTTTACAAGCAAGGGTCACATTGCCCGAGCTGTGCTTGAGAGCATGTGTTTCCAAGTGAAAGATGTCTTGGATTCAATGCATAAAGATTCAGGAGAAAGTGAATCCCAAAAAACAGAGTTTTTGCTTAGAGTGGATGGTGGGGCAACTGTAAACAACCTGCTGATGCAGATTCAGGCAGATTTGGTGGGATGTCCAGTAATTAGACCTGCTGACATAGAGACAACAGCACTTGGAGCAGCCTATGCTGCCGGATTAGCTACTGGGATTTGGAAAGAAGATTTTATTTTCAATACTGAGGAGAAGTTGAAGAATGCTAGAGTTTTCCGTCCTGTAATGACTGAGGAAGTAAGGAAAAAGAAAGTTGACTCTTGGTGCAAAGCTGTTAGTAAAACTTTCGACTTAGCTGATCTTGCTCTTTGA
>Glyma.07g028600.1.p sequence-type=predicted peptide transcript=Glyma.07g028600.1 locus=Glyma.07g028600 ID=Glyma.07g028600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MSKEDVFVGAIDQGTSSSRFIIYDAKTGVVGCHHVEFTQFYPQAGWVEHDPMEILESVKVCVAKAVDKATADGFNVDKGLKAIGLTNQRETTLLWSKSTGLPLHNAIVWMDARTSSICRRLEKELSGGRNHFVESCGLPISTYFSALKLLWLMENVDAVKEAIKKKDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDASTLKTLNIPAEILPNIVSNAEIIGEVGSGWPIAGVPIAGCLGDQHAAMLGQSCRKGEAKSTYGTGAFILLNTGEGIIQSKHGLLSTIAFKLGPKAPTNYALEGSVAIAGAAVQWLRDGLGIISSAAEIEEMALQVESTGGVYFVPAFNGLFAPWWREDARGVCIGITRFTSKGHIARAVLESMCFQVKDVLDSMHKDSGESESQKTEFLLRVDGGATVNNLLMQIQADLVGCPVIRPADIETTALGAAYAAGLATGIWKEDFIFNTEEKLKNARVFRPVMTEEVRKKKVDSWCKAVSKTFDLADLAL*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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