SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.07g023900

Feature Type:gene_model
Chromosome:Gm07
Start:1852430
stop:1854750
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.07g023900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G32060.3AT JGI N/AIEA
GO:0006412GO-bp translation JGI N/AIEA
GO:0005622GO-cc intracellular anatomical structure JGI N/AIEA
GO:0005840GO-cc ribosome JGI N/AIEA
GO:0003735GO-mf structural constituent of ribosome JGI N/AIEA
K02951KEGG Ribosome JGI N/AIEA
KOG3406 KOG 40S ribosomal protein S12 JGI N/AIEA
PTHR11843PantherFam 40S RIBOSOMAL PROTEIN S12 JGI N/AIEA
PF01248Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JGI N/AIEA

Gene model name correspondences to Glyma.07g023900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma07g02720 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.07g023900
>Glyma.07g023900.3 sequence-type=CDS polypeptide=Glyma.07g023900.3.p locus=Glyma.07g023900 id=Glyma.07g023900.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCAGGTGAAGAGGGTGTCATTGCAGTTGAGCCAGCTGCTGCTGCTGCTGCCATCCCAGGCGAGCCAATGGATATCATGACTGCCTTACAACTTGTGCTCAGAAAATCTCTGGCTTATGGTGGTTTGTCGCGTGGCCTTCATGAAGGTGCAAAAGTGATTGAGAAGCATGCTGCACAACTCTGTGTTCTTGCAGAAGACTGTGACCAGCCTGACTATGTTAAACTGGTTAAGGCCCTTTGTGCAGAGCACAATGTTAGCCTGCTGACAGTTCCGAGTGCAAAGACCCTTGGAGAATGGGCTGGTTTGTGCAAGATTGATTCCGAAGGAAAAGCAAGGAAGGTTACTGGTTGCTCCTGTGTGGTTGTGAAGGATTTCGGTGAGGAGCATGAAGCCTATAACGTCGTTCTGCAGCATGTGAAATCTCAATGA
Predicted protein sequences of Glyma.07g023900
>Glyma.07g023900.3.p sequence-type=predicted peptide transcript=Glyma.07g023900.3 locus=Glyma.07g023900 id=Glyma.07g023900.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSGEEGVIAVEPAAAAAAIPGEPMDIMTALQLVLRKSLAYGGLSRGLHEGAKVIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHVKSQ*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo